Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006156g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 7.6e-49 196.8 98 100.0
Nitab4.5_0000669g0110 Nicotiana tabacum HOM05D007569 ORTHO05D009268 1.5e-41 172.6 100 89.0
Peaxi162Scf00005g00394 Petunia axillaris HOM05D007569 ORTHO05D009268 5.9e-33 144.1 92 78.3
PGSC0003DMG400001743 Solanum tuberosum HOM05D007569 ORTHO05D009268 1.1e-26 123.2 92 70.7
Nitab4.5_0003871g0030 Nicotiana tabacum HOM05D007569 ORTHO05D009268 2.3e-21 105.5 94 62.8
Solyc09g007480.3 Solanum lycopersicum HOM05D007569 ORTHO05D009268 4.4e-20 101.3 92 60.9
Nitab4.5_0008568g0070 Nicotiana tabacum HOM05D007569 ORTHO05D009268 3.7e-19 98.2 83 65.1
Peaxi162Scf00472g00312 Petunia axillaris HOM05D007569 ORTHO05D009268 2.0e-17 92.4 90 55.6
Dinv35729 Davidia involucrata HOM05D007569 ORTHO05D009268 2.6e-17 92.0 93 54.8
Solyc10g150149.1 Solanum lycopersicum HOM05D007569 ORTHO05D009268 8.0e-14 80.5 87 54.0
CSS0032625 Camellia sinensis var. sinensis HOM05D007569 ORTHO05D009268 1.5e-12 76.3 81 45.7
Cc06_g03690 Coffea canephora HOM05D007569 ORTHO05D009268 6.3e-11 70.9 91 45.1
Oeu026850.1 Olea europaea HOM05D007569 ORTHO05D009268 1.1e-10 70.1 93 43.0
Actinidia19698 Actinidia chinensis HOM05D007569 ORTHO05D009268 3.5e-09 65.1 93 44.1
Lsat_1_v5_gn_6_30260 Lactuca sativa HOM05D007569 ORTHO05D009268 5.9e-09 64.3 96 42.7
GSVIVG01025645001 Vitis vinifera HOM05D007569 ORTHO05D009268 1.3e-08 63.2 88 45.5
Potri.016G087000 Populus trichocarpa HOM05D007569 ORTHO05D009268 2.9e-08 62.0 94 38.3
Sabra16G0093200 Salix brachista HOM05D007569 ORTHO05D009268 5.0e-08 61.2 94 39.4
Actinidia05265 Actinidia chinensis HOM05D007569 ORTHO05D009268 1.9e-07 59.3 93 44.1
CiPaw.10G136600 Carya illinoinensis HOM05D007569 ORTHO05D009268 4.2e-07 58.2 95 40.0
Ciclev10013224m.g Citrus clementina HOM05D007569 ORTHO05D009268 5.5e-07 57.8 96 44.8
Peaxi162Scf00488g00927 Petunia axillaris HOM05D007569 ORTHO05D009268 5.5e-07 57.8 44 63.6
Potri.006G130400 Populus trichocarpa HOM05D007569 ORTHO05D009268 7.2e-07 57.4 94 37.2
CiPaw.10G136400 Carya illinoinensis HOM05D007569 ORTHO05D009268 9.4e-07 57.0 95 38.9
QL07p045078 Quercus lobata HOM05D007569 ORTHO05D009268 2.7e-06 55.5 94 40.4
CiPaw.09G178900 Carya illinoinensis HOM05D007569 ORTHO05D009268 3.6e-06 55.1 98 41.8
Prupe.6G240500 Prunus persica HOM05D007569 ORTHO05D009268 3.6e-06 55.1 100 37.0
Lalb_Chr25g0289201 Lupinus albus HOM05D007569 ORTHO05D009268 4.7e-06 54.7 55 49.1
CANSAT80G1933 Cannabis sativa HOM05D007569 ORTHO05D009268 6.1e-06 54.3 90 41.1
TAR623G1008 Trochodendron aralioides HOM05D007569 ORTHO05D009268 6.1e-06 54.3 60 45.0
COL.COLO4_27060 Corchorus olitorius HOM05D007569 ORTHO05D009268 8.0e-06 53.9 91 38.5
Haze_20627 Corylus avellana HOM05D007569 ORTHO05D009268 8.0e-06 53.9 96 40.6
Manes.08G004500 Manihot esculenta HOM05D007569 ORTHO05D009268 8.0e-06 53.9 93 39.8


User provided reference genes

Program Settings