Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006156g0020 Nicotiana tabacum HOM05D007360 ORTHO05D008235 3.9e-260 901.0 462 100.0
Nitab4.5_0000669g0130 Nicotiana tabacum HOM05D007360 ORTHO05D008235 4.6e-229 797.7 458 90.4
PGSC0003DMG400001741 Solanum tuberosum HOM05D007360 ORTHO05D008235 1.9e-190 669.5 482 76.1
Solyc09g007460.4 Solanum lycopersicum HOM05D007360 ORTHO05D008235 5.3e-185 651.4 482 74.9
Sopen09g002350 Solanum pennellii HOM05D007360 ORTHO05D008235 3.5e-184 648.7 482 74.7
Peaxi162Scf00005g04017 Petunia axillaris HOM05D007360 ORTHO05D008235 1.4e-161 573.5 458 70.3
Sopen00g009140 Solanum pennellii HOM05D007360 ORTHO05D008235 4.8e-109 399.1 254 82.3
Dinv35727 Davidia involucrata HOM05D007360 ORTHO05D008235 1.9e-97 360.5 493 49.1
Cc06_g03670 Coffea canephora HOM05D007360 ORTHO05D008235 3.0e-87 326.6 477 49.3
Hma1.2p1_0111F.1_g053990 Hydrangea macrophylla HOM05D007360 ORTHO05D008235 7.9e-80 302.0 428 48.4
vmacro20051 Vaccinium macrocarpon HOM05D007360 ORTHO05D008235 2.0e-78 297.4 470 44.5
Actinidia19699 Actinidia chinensis HOM05D007360 ORTHO05D008235 1.8e-76 290.8 507 42.6
TAR633G0942 Trochodendron aralioides HOM05D007360 ORTHO05D008235 4.1e-76 289.7 496 41.7
Oeu060091.1 Olea europaea HOM05D007360 ORTHO05D008235 1.2e-75 288.1 445 47.9
Migut.L01667 Erythranthe guttata HOM05D007360 ORTHO05D008235 4.8e-69 266.2 464 44.4
QL07p045105 Quercus lobata HOM05D007360 ORTHO05D008235 4.1e-68 263.1 479 42.6
Thecc.05G055700 Theobroma cacao HOM05D007360 ORTHO05D008235 1.9e-65 254.2 476 42.9
Cpa.g.sc174.13 Carica papaya HOM05D007360 ORTHO05D008235 3.2e-65 253.4 479 41.3
Cfa017520 Carpinus fangiana HOM05D007360 ORTHO05D008235 9.4e-65 251.9 488 39.5
ClCG10G020460 Citrullus lanatus HOM05D007360 ORTHO05D008235 3.6e-64 250.0 477 41.3
Haze_20630 Corylus avellana HOM05D007360 ORTHO05D008235 8.8e-63 245.4 480 40.2
MELO3C009325.2 Cucumis melo HOM05D007360 ORTHO05D008235 1.5e-62 244.6 436 43.6
CsaV3_3G035660 Cucumis sativus L. HOM05D007360 ORTHO05D008235 9.8e-62 241.9 472 41.3
Prupe.6G240300 Prunus persica HOM05D007360 ORTHO05D008235 4.8e-61 239.6 429 43.6
COL.COLO4_27062 Corchorus olitorius HOM05D007360 ORTHO05D008235 1.8e-60 237.7 467 43.0
FvH4_6g15500 Fragaria vesca HOM05D007360 ORTHO05D008235 4.1e-60 236.5 320 49.4
TWI74G1131 Tripterygium wilfordii HOM05D007360 ORTHO05D008235 4.1e-60 236.5 474 39.7
CiPaw.09G179100 Carya illinoinensis HOM05D007360 ORTHO05D008235 1.2e-59 235.0 305 49.5
Atru.chr8.1896 Acer truncatum HOM05D007360 ORTHO05D008235 1.6e-59 234.6 471 42.5
Duzib128G1437 Durio zibethinus HOM05D007360 ORTHO05D008235 2.7e-59 233.8 470 41.7
SGA_v2.0_scaffold126G33907 Striga asiatica HOM05D007360 ORTHO05D008235 2.5e-57 227.3 470 40.0
FAN14G4542 Fragaria x ananassa HOM05D007360 ORTHO05D008235 2.1e-56 224.2 344 45.6
Lsat_1_v5_gn_6_30100 Lactuca sativa HOM05D007360 ORTHO05D008235 1.8e-55 221.1 473 40.8
Nn2g13027 Nelumbo nucifera HOM05D007360 ORTHO05D008235 3.0e-55 220.3 492 37.4
PGR004G0580 Punica granatum HOM05D007360 ORTHO05D008235 4.4e-54 216.5 475 38.7
CANSAT80G2624 Cannabis sativa HOM05D007360 ORTHO05D008235 7.5e-54 215.7 471 39.5
Manes.08G004115 Manihot esculenta HOM05D007360 ORTHO05D008235 9.8e-54 215.3 386 42.7
FAN09G4144 Fragaria x ananassa HOM05D007360 ORTHO05D008235 8.3e-53 212.2 263 51.3
RcHm_v2.0_Chr3g0469001 Rosa chinensis HOM05D007360 ORTHO05D008235 1.1e-52 211.8 263 50.2
Duzib093G0075 Durio zibethinus HOM05D007360 ORTHO05D008235 3.1e-52 210.3 434 40.6
Potri.006G130600 Populus trichocarpa HOM05D007360 ORTHO05D008235 3.5e-51 206.8 425 40.0
CSS0042376 Camellia sinensis var. sinensis HOM05D007360 ORTHO05D008235 7.8e-51 205.7 549 35.2
Ciclev10011834m.g Citrus clementina HOM05D007360 ORTHO05D008235 1.3e-50 204.9 285 46.7
Gohir.D04G115000 Gossypium hirsutum HOM05D007360 ORTHO05D008235 1.5e-49 201.4 469 37.5
Gorai.009G419600 Gossypium raimondii HOM05D007360 ORTHO05D008235 1.9e-49 201.1 469 37.3
FAN02G3036 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.3e-49 200.3 325 45.5
Gohir.A04G075900 Gossypium hirsutum HOM05D007360 ORTHO05D008235 5.6e-49 199.5 469 36.9
Ah.08g211880 Amaranthus hybridus HOM05D007360 ORTHO05D008235 3.6e-48 196.8 322 44.1
FAN05G5130 Fragaria x ananassa HOM05D007360 ORTHO05D008235 3.6e-48 196.8 317 45.4
Sc20g0005120 Simmondsia chinensis HOM05D007360 ORTHO05D008235 1.0e-47 195.3 378 42.6
ECA233G0563 Erigeron canadensis HOM05D007360 ORTHO05D008235 3.0e-47 193.7 446 37.2
Manes.08G004132 Manihot esculenta HOM05D007360 ORTHO05D008235 2.2e-45 187.6 387 39.5
EL10Ac7g16510 Beta vulgaris HOM05D007360 ORTHO05D008235 6.4e-45 186.0 448 36.6
Manes.08G004904 Manihot esculenta HOM05D007360 ORTHO05D008235 1.1e-44 185.3 261 46.4
Manes.12G045236 Manihot esculenta HOM05D007360 ORTHO05D008235 4.1e-44 183.3 394 38.1
MSTRG.10303 Avicennia marina HOM05D007360 ORTHO05D008235 7.0e-44 182.6 342 41.2
Manes.08G004103 Manihot esculenta HOM05D007360 ORTHO05D008235 7.0e-44 182.6 387 38.8
Manes.08G004112 Manihot esculenta HOM05D007360 ORTHO05D008235 1.6e-43 181.4 436 37.6
DCAR_020845 Daucus carota HOM05D007360 ORTHO05D008235 1.3e-42 178.3 357 40.3
BolC1t05436H Brassica oleracea HOM05D007360 ORTHO05D008235 1.1e-41 175.3 469 36.5
Glyma.10G050400 Glycine max HOM05D007360 ORTHO05D008235 1.5e-41 174.9 470 35.1
Phvul.007G164700 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 7.3e-41 172.6 315 40.6
Manes.05G197400 Manihot esculenta HOM05D007360 ORTHO05D008235 2.1e-40 171.0 394 37.1
AT3G09730 Arabidopsis thaliana HOM05D007360 ORTHO05D008235 2.8e-40 170.6 470 36.6
Glyma.13G137900 Glycine max HOM05D007360 ORTHO05D008235 2.8e-40 170.6 476 34.9
THA.LOC104816327 Tarenaya hassleriana HOM05D007360 ORTHO05D008235 4.7e-40 169.9 384 39.6
AL3G20950 Arabidopsis lyrata HOM05D007360 ORTHO05D008235 3.1e-39 167.2 464 37.7
Lalb_Chr02g0156301 Lupinus albus HOM05D007360 ORTHO05D008235 5.2e-39 166.4 387 39.8
Thhalv10020860m.g Eutrema salsugineum HOM05D007360 ORTHO05D008235 8.9e-39 165.6 466 37.8
Sp3g08070 Schrenkiella parvula HOM05D007360 ORTHO05D008235 1.2e-38 165.2 466 36.9
Manes.08G004118 Manihot esculenta HOM05D007360 ORTHO05D008235 1.5e-38 164.9 447 35.8
Carub.0003s0882 Capsella rubella HOM05D007360 ORTHO05D008235 1.7e-37 161.4 385 38.2
BraA01t04285Z Brassica rapa HOM05D007360 ORTHO05D008235 2.2e-37 161.0 374 38.5
Lj1g0018826 Lotus japonicus HOM05D007360 ORTHO05D008235 4.9e-37 159.8 221 49.8
Manes.08G014114 Manihot esculenta HOM05D007360 ORTHO05D008235 6.4e-37 159.5 402 35.8
Manes.08G004130 Manihot esculenta HOM05D007360 ORTHO05D008235 4.1e-36 156.8 335 37.9
Manes.08G004125 Manihot esculenta HOM05D007360 ORTHO05D008235 9.2e-36 155.6 423 35.0
Sabra06G0102600 Salix brachista HOM05D007360 ORTHO05D008235 1.2e-35 155.2 422 36.7
VMungo0720G0507 Vigna mungo HOM05D007360 ORTHO05D008235 4.6e-35 153.3 246 44.3
MD04G1105400 Malus domestica HOM05D007360 ORTHO05D008235 7.8e-35 152.5 246 45.5
Manes.08G004107 Manihot esculenta HOM05D007360 ORTHO05D008235 1.3e-34 151.8 434 34.1
Lj5g0015354 Lotus japonicus HOM05D007360 ORTHO05D008235 2.3e-34 151.0 307 38.1
Aqoxy4G03227 Aquilegia oxysepala HOM05D007360 ORTHO05D008235 3.9e-34 150.2 283 38.9
A01p42170 Brassica napus HOM05D007360 ORTHO05D008235 5.6e-33 146.4 468 33.3
CARHR084150 Cardamine hirsuta HOM05D007360 ORTHO05D008235 1.6e-32 144.8 466 34.3
Lalb_Chr21g0314721 Lupinus albus HOM05D007360 ORTHO05D008235 6.2e-32 142.9 322 40.7
Sed0020725 Sechium edule HOM05D007360 ORTHO05D008235 1.2e-30 138.7 339 36.6
Manes.05G196900 Manihot esculenta HOM05D007360 ORTHO05D008235 2.9e-29 134.0 251 39.0
Manes.08G004119 Manihot esculenta HOM05D007360 ORTHO05D008235 3.0e-26 124.0 246 39.8
Aa31LG3G2160 Aethionema arabicum HOM05D007360 ORTHO05D008235 5.2e-23 113.2 308 37.7
GSVIVG01025644001 Vitis vinifera HOM05D004499 ORTHO05D004928 2.6e-22 110.9 115 53.0
MD12G1122600 Malus domestica HOM05D007360 ORTHO05D008235 1.3e-21 108.6 112 58.0
HanXRQChr02g0051971 Helianthus annuus HOM05D007360 ORTHO05D008235 6.4e-21 106.3 329 31.9
Phvul.001G175350 Phaseolus vulgaris HOM05D007360 ORTHO05D008235 3.8e-13 80.5 223 32.3
Hund20189 Selenicereus undatus HOM05D007360 ORTHO05D008235 6.0e-11 73.2 91 44.0
TAR625G1494 Trochodendron aralioides HOM05D005497 ORTHO05D006733 1.1e-09 68.9 242 28.1
AagrBONN_evm.TU.Sc2ySwM_228.3362 Anthoceros agrestis HOM05D018912 ORTHO05D021275 3.3e-09 67.4 251 29.1
Actinidia04644 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-09 67.0 49 65.3
Actinidia14388 Actinidia chinensis HOM05D004499 ORTHO05D004928 4.3e-09 67.0 49 65.3
Actinidia28468 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-09 67.0 49 65.3
Actinidia33720 Actinidia chinensis HOM05D007360 ORTHO05D008235 4.3e-09 67.0 49 65.3
Manes.09G079705 Manihot esculenta HOM05D007360 ORTHO05D008235 4.3e-09 67.0 53 66.0
FvH4_2g41090 Fragaria vesca HOM05D005497 ORTHO05D006733 9.6e-09 65.9 275 28.4
Rhsim02G0213400 Rhododendron simsii HOM05D005497 ORTHO05D006733 2.1e-08 64.7 232 27.2
FAN15G1151 Fragaria x ananassa HOM05D005497 ORTHO05D006733 1.1e-07 62.4 247 25.9
HanXRQChr02g0051981 Helianthus annuus HOM05D007360 ORTHO05D008235 1.1e-07 62.4 123 39.8
Hma1.2p1_1284F.1_g272900 Hydrangea macrophylla HOM05D005497 ORTHO05D006733 1.4e-07 62.0 254 27.2
Nn2g12349 Nelumbo nucifera HOM05D005497 ORTHO05D006733 6.9e-07 59.7 246 26.4
Oeu063812.1 Olea europaea HOM05D007360 ORTHO05D008235 2.0e-06 58.2 106 42.5
Actinidia10518 Actinidia chinensis HOM05D005497 ORTHO05D006733 2.6e-06 57.8 231 29.9
Aqoxy2G02176 Aquilegia oxysepala HOM05D005497 ORTHO05D006733 2.6e-06 57.8 234 25.6
FAN05G5083 Fragaria x ananassa HOM05D005497 ORTHO05D006733 3.4e-06 57.4 227 27.8


User provided reference genes

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