Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006154g0010 Nicotiana tabacum HOM05D004533 ORTHO05D005347 4.5e-140 501.5 303 100.0
Nitab4.5_0000027g0050 Nicotiana tabacum HOM05D004533 ORTHO05D005347 1.2e-97 360.5 304 80.6
Peaxi162Scf00175g00062 Petunia axillaris HOM05D004533 ORTHO05D005347 1.5e-71 273.9 311 67.8
Solyc05g012030.1 Solanum lycopersicum HOM05D004533 ORTHO05D005347 3.2e-53 213.0 310 61.3
Cc11_g11730 Coffea canephora HOM05D004533 ORTHO05D005347 7.4e-42 175.3 317 47.9
Duzib248G0866 Durio zibethinus HOM05D004533 ORTHO05D005347 7.4e-42 175.3 306 50.7
Manes.01G025900 Manihot esculenta HOM05D004533 ORTHO05D005347 9.6e-42 174.9 311 52.7
Haze_11876 Corylus avellana HOM05D004533 ORTHO05D005347 4.8e-41 172.6 306 52.3
PGSC0003DMG400028307 Solanum tuberosum HOM05D004533 ORTHO05D005347 5.3e-40 169.1 311 50.5
QL03p073504 Quercus lobata HOM05D004533 ORTHO05D005347 4.5e-39 166.0 308 52.3
Gohir.A03G105900 Gossypium hirsutum HOM05D004533 ORTHO05D005347 3.8e-38 162.9 309 42.1
Gohir.D02G131100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.4e-37 161.0 313 50.2
Sabra10G0118800 Salix brachista HOM05D004533 ORTHO05D005347 4.2e-37 159.5 312 48.4
Gohir.D13G084000 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.2e-36 157.9 315 50.2
Gorai.013G095800 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.2e-36 157.9 315 50.2
Gorai.005G147000 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.6e-36 157.5 313 49.5
Sopen05g006810 Solanum pennellii HOM05D004533 ORTHO05D005347 1.6e-36 157.5 249 61.4
Prupe.1G290400 Prunus persica HOM05D004533 ORTHO05D005347 2.7e-36 156.8 322 51.2
Gohir.A13G084500 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.3e-35 154.5 314 49.7
MSTRG.2297 Avicennia marina HOM05D004533 ORTHO05D005347 2.3e-35 153.7 321 40.8
Potri.010G154200 Populus trichocarpa HOM05D004533 ORTHO05D005347 2.3e-35 153.7 312 45.2
Atru.chr11.1592 Acer truncatum HOM05D004533 ORTHO05D005347 3.0e-35 153.3 309 46.3
Oeu020361.1 Olea europaea HOM05D004533 ORTHO05D005347 1.1e-34 151.4 300 45.7
Duzib251G0596 Durio zibethinus HOM05D004533 ORTHO05D005347 1.5e-34 151.0 313 47.6
Rhsim12G0073600 Rhododendron simsii HOM05D004533 ORTHO05D005347 2.5e-34 150.2 296 43.2
Thecc.02G326400 Theobroma cacao HOM05D004533 ORTHO05D005347 4.3e-34 149.4 315 47.9
Duzib268G0904 Durio zibethinus HOM05D004533 ORTHO05D005347 2.1e-33 147.1 313 43.8
Eucgr.B03139 Eucalyptus grandis HOM05D004533 ORTHO05D005347 8.2e-33 145.2 326 45.7
TWI75G1153 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 8.2e-33 145.2 294 48.6
Dinv20147 Davidia involucrata HOM05D004533 ORTHO05D005347 1.4e-32 144.4 309 48.5
Medtr5g046750 Medicago truncatula HOM05D004533 ORTHO05D005347 3.1e-32 143.3 298 51.0
Manes.05G112100 Manihot esculenta HOM05D004533 ORTHO05D005347 4.0e-32 142.9 310 47.1
TWI79G0987 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 6.9e-32 142.1 294 49.7
Hma1.2p1_0428F.1_g151070 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 1.2e-31 141.4 268 41.4
Phvul.003G039500 Phaseolus vulgaris HOM05D004533 ORTHO05D005347 3.4e-31 139.8 328 46.6
CSS0048067 Camellia sinensis var. sinensis HOM05D004533 ORTHO05D005347 7.6e-31 138.7 306 48.7
TWI31G0640 Tripterygium wilfordii HOM05D004533 ORTHO05D005347 1.3e-30 137.9 290 49.0
Aqoxy3G03701 Aquilegia oxysepala HOM05D004533 ORTHO05D005347 1.7e-30 137.5 311 46.3
Psat2g098360 Pisum sativum HOM05D004533 ORTHO05D005347 1.7e-30 137.5 301 45.2
TAR629G1049 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.7e-30 137.5 312 40.1
Cfa008857 Carpinus fangiana HOM05D004533 ORTHO05D005347 3.8e-30 136.3 309 47.2
MSTRG.13457 Avicennia marina HOM05D004533 ORTHO05D005347 4.9e-30 136.0 305 44.3
TPR.G38582 Trifolium pratense HOM05D004533 ORTHO05D005347 4.9e-30 136.0 300 49.7
Potri.008G098200 Populus trichocarpa HOM05D004533 ORTHO05D005347 8.4e-30 135.2 305 45.2
CiPaw.05G123000 Carya illinoinensis HOM05D004533 ORTHO05D005347 1.4e-29 134.4 313 47.3
Lalb_Chr17g0341371 Lupinus albus HOM05D004533 ORTHO05D005347 1.4e-29 134.4 302 48.7
vmacro01308 Vaccinium macrocarpon HOM05D004533 ORTHO05D005347 6.0e-28 129.0 300 41.0
Ca_05043_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.0e-27 128.3 299 48.2
Ca_19594_v3 Cicer arietinum L. HOM05D004533 ORTHO05D005347 1.0e-27 128.3 299 48.2
TAR371G0131 Trochodendron aralioides HOM05D004533 ORTHO05D005347 1.8e-27 127.5 300 46.3
CiPaw.06G093700 Carya illinoinensis HOM05D004533 ORTHO05D005347 3.0e-27 126.7 315 46.3
VMungo1215G1442 Vigna mungo HOM05D004533 ORTHO05D005347 3.0e-27 126.7 251 51.4
Hma1.2p1_3075F.1_g332390 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 5.1e-27 125.9 304 37.8
Rhsim09G0125000 Rhododendron simsii HOM05D004533 ORTHO05D005347 6.7e-27 125.6 310 47.1
Lj2g0015000 Lotus japonicus HOM05D004533 ORTHO05D005347 8.7e-27 125.2 304 47.7
Nn4g23503 Nelumbo nucifera HOM05D004533 ORTHO05D005347 8.7e-27 125.2 320 45.0
Oeu028724.1 Olea europaea HOM05D004533 ORTHO05D005347 8.7e-27 125.2 300 42.7
TAR374G1471 Trochodendron aralioides HOM05D004533 ORTHO05D005347 8.7e-27 125.2 265 39.6
Cpa.g.sc1.160 Carica papaya HOM05D004533 ORTHO05D005347 1.1e-26 124.8 313 46.6
Gorai.008G175700 Gossypium raimondii HOM05D004533 ORTHO05D005347 1.9e-26 124.0 293 38.2
Lalb_Chr10g0099071 Lupinus albus HOM05D004533 ORTHO05D005347 3.3e-26 123.2 306 46.7
Ciclev10032087m.g Citrus clementina HOM05D004533 ORTHO05D005347 7.4e-26 122.1 312 44.6
Gohir.D12G163100 Gossypium hirsutum HOM05D004533 ORTHO05D005347 2.8e-25 120.2 293 45.1
Gohir.A12G159800 Gossypium hirsutum HOM05D004533 ORTHO05D005347 1.1e-24 118.2 294 46.3
Actinidia26533 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.4e-24 117.1 307 45.6
COL.COLO4_27845 Corchorus olitorius HOM05D004533 ORTHO05D005347 3.1e-24 116.7 318 43.1
ECA233G1177 Erigeron canadensis HOM05D004533 ORTHO05D005347 3.1e-24 116.7 319 37.9
MD16G1058700 Malus domestica HOM05D004533 ORTHO05D005347 5.3e-24 115.9 319 44.2
Glyma.01G063800 Glycine max HOM05D004533 ORTHO05D005347 6.9e-24 115.5 335 42.7
MELO3C011411.2 Cucumis melo HOM05D004533 ORTHO05D005347 1.2e-23 114.8 329 36.8
Dinv34043 Davidia involucrata HOM05D004533 ORTHO05D005347 2.6e-23 113.6 303 44.9
Oeu048133.1 Olea europaea HOM05D004533 ORTHO05D005347 2.6e-23 113.6 299 43.5
Oeu048134.1 Olea europaea HOM05D004533 ORTHO05D005347 2.6e-23 113.6 299 43.5
Sabra08G0074200 Salix brachista HOM05D004533 ORTHO05D005347 7.6e-23 112.1 313 43.8
Actinidia13399 Actinidia chinensis HOM05D004533 ORTHO05D005347 2.2e-22 110.5 230 52.6
MSTRG.7732 Avicennia marina HOM05D004533 ORTHO05D005347 2.2e-22 110.5 302 43.7
CsaV3_6G033770 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.1e-21 108.2 332 35.2
EL10Ac6g15027 Beta vulgaris HOM05D004533 ORTHO05D005347 1.4e-21 107.8 213 43.2
MD13G1059400 Malus domestica HOM05D004533 ORTHO05D005347 1.4e-21 107.8 319 43.3
Glyma.02G121400 Glycine max HOM05D004533 ORTHO05D005347 4.2e-21 106.3 345 41.2
ClCG08G010520 Citrullus lanatus HOM05D004533 ORTHO05D005347 5.5e-21 105.9 331 37.5
FAN17G0049 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.2e-20 104.8 307 45.0
Sed0020971 Sechium edule HOM05D004533 ORTHO05D005347 1.2e-20 104.8 325 34.8
SGA_v2.0_scaffold287G47174 Striga asiatica HOM05D004533 ORTHO05D005347 1.2e-20 104.8 301 41.9
FvH4_4g29630 Fragaria vesca HOM05D004533 ORTHO05D005347 1.6e-20 104.4 307 44.6
FAN12G3098 Fragaria x ananassa HOM05D004533 ORTHO05D005347 1.6e-20 104.4 307 44.6
PSO017G3527 Papaver somniferum HOM05D004533 ORTHO05D005347 3.6e-20 103.2 316 33.9
FAN22G0793 Fragaria x ananassa HOM05D004533 ORTHO05D005347 4.6e-20 102.8 307 44.0
CsaV3_5G033410 Cucumis sativus L. HOM05D004533 ORTHO05D005347 1.0e-19 101.7 301 35.2
PSO478G4496 Papaver somniferum HOM05D004533 ORTHO05D005347 1.4e-19 101.3 319 34.8
HanXRQChr12g0363201 Helianthus annuus HOM05D004533 ORTHO05D005347 1.8e-19 100.9 318 39.9
Lsat_1_v5_gn_8_45920 Lactuca sativa HOM05D004533 ORTHO05D005347 1.8e-19 100.9 311 42.8
Actinidia16147 Actinidia chinensis HOM05D004533 ORTHO05D005347 3.0e-19 100.1 228 50.0
Hma1.2p1_0473F.1_g160260 Hydrangea macrophylla HOM05D004533 ORTHO05D005347 6.7e-19 99.0 291 36.8
FAN07G1881 Fragaria x ananassa HOM05D004533 ORTHO05D005347 8.8e-19 98.6 307 44.0
THA.LOC104798855 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.3e-18 96.3 301 38.9
THA.LOC104803161 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.3e-18 96.3 301 38.9
THA.LOC104822894 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 4.3e-18 96.3 301 38.9
Actinidia19907 Actinidia chinensis HOM05D004533 ORTHO05D005347 7.4e-18 95.5 297 44.1
RcHm_v2.0_Chr4g0437861 Rosa chinensis HOM05D004533 ORTHO05D005347 9.7e-18 95.1 317 41.6
arahy.Tifrunner.gnm1.ann1.PV72KB Arachis hypogaea HOM05D004533 ORTHO05D005347 1.3e-17 94.7 327 41.3
Sc11g0002570 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.7e-17 94.4 314 39.2
arahy.Tifrunner.gnm1.ann1.NK9Z7F Arachis hypogaea HOM05D004533 ORTHO05D005347 1.4e-16 91.3 327 41.9
ClCG05G023610 Citrullus lanatus HOM05D004533 ORTHO05D005347 2.4e-16 90.5 305 40.3
DCAR_007202 Daucus carota HOM05D004533 ORTHO05D005347 5.3e-16 89.4 301 35.9
BcaB03g15876 Brassica carinata HOM05D004533 ORTHO05D005347 6.9e-16 89.0 311 37.0
MELO3C012160.2 Cucumis melo HOM05D004533 ORTHO05D005347 6.9e-16 89.0 301 34.2
Sp5g24200 Schrenkiella parvula HOM05D004533 ORTHO05D005347 1.2e-15 88.2 311 36.3
DCAR_023748 Daucus carota HOM05D004533 ORTHO05D005347 1.5e-15 87.8 301 40.5
DCAR_026684 Daucus carota HOM05D004533 ORTHO05D005347 1.5e-15 87.8 309 32.7
BraA02t06624Z Brassica rapa HOM05D004533 ORTHO05D005347 3.4e-15 86.7 315 35.9
DCAR_030051 Daucus carota HOM05D004533 ORTHO05D005347 3.4e-15 86.7 307 36.2
ECA234G4159 Erigeron canadensis HOM05D004533 ORTHO05D005347 3.4e-15 86.7 311 32.8
Ah.02g126770 Amaranthus hybridus HOM05D004533 ORTHO05D005347 5.9e-15 85.9 301 34.2
Lsat_1_v5_gn_4_11700 Lactuca sativa HOM05D004533 ORTHO05D005347 5.9e-15 85.9 320 35.6
Carub.0002s1576 Capsella rubella HOM05D004533 ORTHO05D005347 7.7e-15 85.5 306 36.9
BraA07t31139Z Brassica rapa HOM05D004533 ORTHO05D005347 1.3e-14 84.7 313 35.8
BcaC08g46370 Brassica carinata HOM05D004533 ORTHO05D005347 1.7e-14 84.3 309 36.2
C06p40740 Brassica napus HOM05D004533 ORTHO05D005347 1.7e-14 84.3 309 36.2
BolC6t39358H Brassica oleracea HOM05D004533 ORTHO05D005347 1.7e-14 84.3 309 36.2
BolC2t08676H Brassica oleracea HOM05D004533 ORTHO05D005347 5.0e-14 82.8 315 36.2
C02p26000 Brassica napus HOM05D004533 ORTHO05D005347 6.5e-14 82.4 315 35.6
A07p35490 Brassica napus HOM05D004533 ORTHO05D005347 8.5e-14 82.0 313 35.5
ATR0827G049 Amborella trichopoda HOM05D004533 ORTHO05D005347 1.1e-13 81.6 303 34.0
A02p15640 Brassica napus HOM05D004533 ORTHO05D005347 1.9e-13 80.9 315 35.9
BcaC03g15057 Brassica carinata HOM05D004533 ORTHO05D005347 5.5e-13 79.3 315 34.9
AT1G69160 Arabidopsis thaliana HOM05D004533 ORTHO05D005347 2.1e-12 77.4 315 37.8
Ah.03g138730 Amaranthus hybridus HOM05D004533 ORTHO05D005347 2.7e-12 77.0 307 35.2
PSO782G4709 Papaver somniferum HOM05D004533 ORTHO05D005347 2.7e-12 77.0 317 35.0
Thhalv10018878m.g Eutrema salsugineum HOM05D004533 ORTHO05D005347 1.8e-11 74.3 311 35.7
PSO063G5982 Papaver somniferum HOM05D004533 ORTHO05D005347 3.0e-11 73.6 321 31.2
AL2G28250 Arabidopsis lyrata HOM05D004533 ORTHO05D005347 3.9e-11 73.2 308 38.0
THA.LOC104821996 Tarenaya hassleriana HOM05D004533 ORTHO05D005347 3.9e-11 73.2 290 37.9
Sed0009680 Sechium edule HOM05D004533 ORTHO05D005347 6.7e-11 72.4 291 30.2
Lj6P776T6 Lonicera japonica HOM05D004533 ORTHO05D005347 1.1e-10 71.6 141 40.4
Aa31LG4G11830 Aethionema arabicum HOM05D004533 ORTHO05D005347 3.3e-10 70.1 296 39.5
Nn3g17512 Nelumbo nucifera HOM05D004533 ORTHO05D005347 3.3e-10 70.1 309 36.9
PGR119G0103 Punica granatum HOM05D004533 ORTHO05D005347 1.3e-09 68.2 221 44.8
CARHR062030 Cardamine hirsuta HOM05D004533 ORTHO05D005347 8.2e-09 65.5 307 33.2
Sc04g0007440 Simmondsia chinensis HOM05D004533 ORTHO05D005347 1.4e-08 64.7 302 37.4
PGR102G1315 Punica granatum HOM05D004533 ORTHO05D005347 4.5e-07 59.7 120 40.8
CDE02G4104 Ceratophyllum demersum HOM05D004533 ORTHO05D005347 7.7e-07 58.9 306 29.4
Migut.E00039 Erythranthe guttata HOM05D004533 ORTHO05D005347 5.0e-06 56.2 306 32.0


User provided reference genes

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