Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006137g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-89 332.4 184 100.0
Nitab4.5_0005100g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.1e-31 139.8 121 66.1
Nitab4.5_0001569g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.1e-21 107.5 120 55.8
Nitab4.5_0009493g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-17 94.4 122 50.8
Nitab4.5_0009562g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-17 92.4 91 56.0
Nitab4.5_0000013g0580 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-17 92.0 92 54.3
Nitab4.5_0002828g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-15 87.4 121 47.1
Nitab4.5_0002177g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.1e-15 85.1 121 46.3
Nitab4.5_0001287g0180 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-14 83.6 153 41.8
Nitab4.5_0000527g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-14 81.6 140 43.6
Nitab4.5_0009728g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.3e-13 79.3 83 54.2
Nitab4.5_0000082g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-12 76.6 92 46.7
Nitab4.5_0000386g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-12 75.9 92 51.1
Nitab4.5_0002249g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-12 75.9 88 42.0
Nitab4.5_0002284g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-12 75.9 92 45.7
Nitab4.5_0005112g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.7e-12 75.9 86 48.8
Nitab4.5_0001046g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-12 75.1 91 45.1
Nitab4.5_0006350g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.3e-12 75.1 81 43.2
Nitab4.5_0000031g0320 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.2e-12 74.7 90 48.9
Nitab4.5_0000677g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-11 73.9 93 45.2
Nitab4.5_0006300g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-11 73.9 58 65.5
Nitab4.5_0000109g0440 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.1e-11 72.8 92 45.7
Nitab4.5_0000026g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.3e-11 72.0 92 42.4
Nitab4.5_0000107g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.3e-11 72.0 88 46.6
Nitab4.5_0006838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.0e-11 71.6 92 44.6
Nitab4.5_0002591g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.1e-11 71.2 92 43.5
Nitab4.5_0003374g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 70.9 93 45.2
Nitab4.5_0008753g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-10 70.9 67 59.7
Nitab4.5_0000188g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-10 70.5 92 43.5
Nitab4.5_0003397g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.6e-10 69.7 94 46.8
Nitab4.5_0000883g0200 Nicotiana tabacum HOM05D011002 ORTHO05D000007 3.5e-10 69.3 146 38.4
Nitab4.5_0002658g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.5e-10 69.3 88 44.3
Nitab4.5_0000468g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.5e-10 68.9 92 43.5
Nitab4.5_0012105g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.9e-10 68.6 84 47.6
Nitab4.5_0000234g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.2 66 53.0
Nitab4.5_0005517g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.2 83 45.8
Nitab4.5_0007450g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.2 92 42.4
Nitab4.5_0007582g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.7e-10 68.2 92 43.5
Nitab4.5_0000010g0200 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-09 67.8 83 48.2
Nitab4.5_0003940g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.3e-09 67.4 85 47.1
Solyc04g074620.1 Solanum lycopersicum HOM05D000024 ORTHO05D000007 1.3e-09 67.4 90 45.6
Nitab4.5_0000357g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.7e-09 67.0 77 46.8
Nitab4.5_0000173g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.2e-09 66.6 94 46.8
PGSC0003DMG400038306 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.2e-09 66.6 62 53.2
Nitab4.5_0000465g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.8e-09 65.9 92 37.0
PGSC0003DMG400045233 Solanum tuberosum HOM05D000024 ORTHO05D000007 3.8e-09 65.9 79 50.6
Nitab4.5_0000256g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.5 62 53.2
Nitab4.5_0000507g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.5 85 42.4
Nitab4.5_0001264g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.0e-09 65.5 90 45.6
Nitab4.5_0000103g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-09 65.1 92 40.2
Nitab4.5_0000213g0190 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-09 65.1 85 47.1
Nitab4.5_0002053g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-09 65.1 92 41.3
Nitab4.5_0002331g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.5e-09 65.1 92 41.3
Nitab4.5_0000092g0340 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-09 64.7 73 46.6
Nitab4.5_0005584g0050 Nicotiana tabacum HOM05D000077 ORTHO05D000339 8.5e-09 64.7 36 75.0
Nitab4.5_0007582g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.5e-09 64.7 94 43.6
Nitab4.5_0000068g0370 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-08 63.9 34 82.4
Nitab4.5_0001733g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-08 63.9 57 59.6
Nitab4.5_0002157g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-08 63.9 51 58.8
Nitab4.5_0009076g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.5e-08 63.9 75 45.3
Nitab4.5_0000372g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 63.5 41 70.7
Nitab4.5_0001704g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.9e-08 63.5 88 40.9
Nitab4.5_0003978g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 63.2 64 53.1
Nitab4.5_0004776g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.5e-08 63.2 73 43.8
Nitab4.5_0000417g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 62.8 39 66.7
Nitab4.5_0000993g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 62.8 92 40.2
Nitab4.5_0011088g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.2e-08 62.8 94 42.6
Nitab4.5_0000063g0330 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 87 46.0
Nitab4.5_0000413g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 92 41.3
Nitab4.5_0000961g0170 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 72 45.8
Nitab4.5_0002164g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 70 44.3
Nitab4.5_0006080g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 92 38.0
Nitab4.5_0008745g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.2e-08 62.4 96 39.6
Nitab4.5_0000044g0280 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-08 62.0 95 41.1
Nitab4.5_0000171g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-08 62.0 36 77.8
Nitab4.5_0000308g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-08 62.0 36 75.0
Nitab4.5_0000637g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000022 5.5e-08 62.0 92 45.7
Nitab4.5_0001667g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-08 62.0 36 77.8
Nitab4.5_0007963g0080 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.5e-08 62.0 36 72.2
Nitab4.5_0000006g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-08 61.6 36 72.2
Nitab4.5_0000261g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 7.2e-08 61.6 47 61.7
Nitab4.5_0024598g0010 Nicotiana tabacum HOM05D000024 ORTHO05D284621 7.2e-08 61.6 77 50.6
Nitab4.5_0000143g0270 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 34 73.5
Nitab4.5_0000575g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 73 43.8
Nitab4.5_0000914g0250 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 60 51.7
Nitab4.5_0001660g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 36 75.0
Nitab4.5_0001997g0070 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 38 68.4
Nitab4.5_0002004g0060 Nicotiana tabacum HOM05D000040 ORTHO05D010138 9.4e-08 61.2 57 56.1
Nitab4.5_0015178g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 9.4e-08 61.2 92 40.2
Nitab4.5_0002624g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 92 41.3
Nitab4.5_0003185g0110 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 87 42.5
Nitab4.5_0003236g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 96 42.7
Nitab4.5_0005049g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 92 39.1
Nitab4.5_0009838g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.2e-07 60.8 54 55.6
Nitab4.5_0000270g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 74 44.6
Nitab4.5_0000472g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 131 32.8
Nitab4.5_0001146g0240 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 93 38.7
Nitab4.5_0002847g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 92 41.3
Nitab4.5_0003315g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 94 39.4
Nitab4.5_0005065g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.6e-07 60.5 93 41.9
Peaxi162Scf00423g00097 Petunia axillaris HOM05D000155 ORTHO05D000022 1.6e-07 60.5 90 43.3
Peaxi162Scf00236g00077 Petunia axillaris HOM05D000024 ORTHO05D000007 2.1e-07 60.1 90 43.3
Nitab4.5_0000032g0500 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 36 69.4
Nitab4.5_0000149g0090 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 70 48.6
Nitab4.5_0000256g0220 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 90 40.0
Nitab4.5_0000313g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 48 60.4
Nitab4.5_0001676g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 51 56.9
Nitab4.5_0003665g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 96 42.7
Nitab4.5_0008161g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 89 36.0
PGSC0003DMG400001167 Solanum tuberosum HOM05D000024 ORTHO05D000007 2.7e-07 59.7 43 62.8
Nitab4.5_0000061g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 59.3 80 43.8
Nitab4.5_0000406g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 59.3 38 68.4
Nitab4.5_0000457g0470 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 59.3 59 47.5
Nitab4.5_0001286g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 59.3 96 39.6
Nitab4.5_0006194g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.6e-07 59.3 90 35.6
Peaxi162Scf00623g00007 Petunia axillaris HOM05D000024 ORTHO05D000007 3.6e-07 59.3 201 27.9
Peaxi162Scf00773g00120 Petunia axillaris HOM05D000024 ORTHO05D000007 3.6e-07 59.3 75 42.7
Nitab4.5_0000008g0530 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 58.9 83 41.0
Nitab4.5_0002737g0100 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 58.9 94 40.4
Nitab4.5_0004118g0150 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 58.9 92 39.1
Nitab4.5_0004728g0130 Nicotiana tabacum HOM05D000024 ORTHO05D000007 4.7e-07 58.9 45 62.2
CAN.G868.10 Capsicum annuum HOM05D000024 ORTHO05D000007 8.0e-07 58.2 36 66.7
Nitab4.5_0002698g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-07 58.2 36 69.4
Nitab4.5_0002956g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-07 58.2 91 40.7
Nitab4.5_0005246g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.0e-07 58.2 36 72.2
Nitab4.5_0002507g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.0e-06 57.8 50 54.0
Nitab4.5_0000045g0050 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.4 94 40.4
Nitab4.5_0000256g0360 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.4 90 37.8
Nitab4.5_0000902g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.4 90 41.1
Nitab4.5_0002977g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.4 93 40.9
Nitab4.5_0004401g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.4e-06 57.4 83 44.6
Peaxi162Scf01533g00007 Petunia axillaris HOM05D000024 ORTHO05D036921 1.4e-06 57.4 82 39.0
Nitab4.5_0000722g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.0 34 70.6
Nitab4.5_0009832g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 1.8e-06 57.0 64 48.4
Nitab4.5_0000274g0290 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 56.6 92 38.0
Nitab4.5_0001383g0160 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 56.6 113 36.3
Nitab4.5_0002284g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000007 2.3e-06 56.6 54 50.0
Nitab4.5_0011177g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 3.0e-06 56.2 130 33.8
Peaxi162Scf01030g00115 Petunia axillaris HOM05D000024 ORTHO05D000007 4.0e-06 55.8 92 44.6
Nitab4.5_0001880g0020 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 55.5 80 41.2
Nitab4.5_0002616g0030 Nicotiana tabacum HOM05D000024 ORTHO05D000007 5.2e-06 55.5 92 38.0
Nitab4.5_0000242g0010 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 55.1 33 69.7
Nitab4.5_0000715g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 6.7e-06 55.1 36 72.2
Nitab4.5_0000541g0060 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-06 54.7 31 74.2
Nitab4.5_0002289g0140 Nicotiana tabacum HOM05D000024 ORTHO05D000007 8.8e-06 54.7 26 92.3


User provided reference genes

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