Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006121g0010 Nicotiana tabacum HOM05D005968 ORTHO05D007158 1.0e-40 169.5 76 100.0
Nitab4.5_0009876g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 4.7e-30 134.0 66 92.4
Oeu038140.1 Olea europaea HOM05D005968 ORTHO05D007158 4.7e-30 134.0 66 92.4
AUR62006466 Chenopodium quinoa HOM05D005968 ORTHO05D007158 1.4e-29 132.5 66 90.9
HanXRQChr09g0245781 Helianthus annuus HOM05D005968 ORTHO05D007158 1.4e-29 132.5 69 88.4
Lsat_1_v5_gn_8_63401 Lactuca sativa HOM05D005968 ORTHO05D007158 1.4e-29 132.5 69 88.4
Peaxi162Scf00401g00718 Petunia axillaris HOM05D005968 ORTHO05D007158 2.3e-29 131.7 66 90.9
CAN.G160.61 Capsicum annuum HOM05D005968 ORTHO05D007158 4.0e-29 131.0 66 90.9
ECA236G4418 Erigeron canadensis HOM05D005968 ORTHO05D007158 4.0e-29 131.0 69 87.0
Manes.14G143600 Manihot esculenta HOM05D005968 ORTHO05D007158 4.0e-29 131.0 69 87.0
CSS0021374 Camellia sinensis var. sinensis HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
CANSAT11G2689 Cannabis sativa HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
FvH4_1g00920 Fragaria vesca HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
FAN23G3092 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
FAN26G1763 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
FAN28G0447 Fragaria x ananassa HOM05D005968 ORTHO05D007158 5.2e-29 130.6 66 89.4
AUR62029822 Chenopodium quinoa HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Cc06_g14950 Coffea canephora HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
COL.COLO4_18810 Corchorus olitorius HOM05D000238 ORTHO05D007158 6.8e-29 130.2 66 89.4
Gohir.A08G251800 Gossypium hirsutum HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Gohir.D08G273400 Gossypium hirsutum HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Gorai.004G291800 Gossypium raimondii HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Potri.006G184300 Populus trichocarpa HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Thecc.09G030600 Theobroma cacao HOM05D005968 ORTHO05D007158 6.8e-29 130.2 66 89.4
Atru.chr7.47_Atru.chr7.48 Acer truncatum HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
Glyma.02G204100 Glycine max HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
Glyma.17G073700 Glycine max HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
Lj4g0027447 Lotus japonicus HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
Nn8g39893 Nelumbo nucifera HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 87.9
Phvul.003G156000 Phaseolus vulgaris HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
VMungo1215G2113 Vigna mungo HOM05D005968 ORTHO05D007158 8.9e-29 129.8 66 89.4
EL10Ac8g18668 Beta vulgaris HOM05D005968 ORTHO05D007158 1.2e-28 129.4 66 89.4
Migut.K00326 Erythranthe guttata HOM05D005968 ORTHO05D007158 1.2e-28 129.4 66 87.9
SalBow1G6433 Salvia bowleyana HOM05D005968 ORTHO05D007158 1.2e-28 129.4 66 87.9
Sopen07g001720 Solanum pennellii HOM05D005968 ORTHO05D007158 1.2e-28 129.4 66 89.4
PGSC0003DMG400011184 Solanum tuberosum HOM05D005968 ORTHO05D007158 1.2e-28 129.4 66 89.4
Duzib187G1838 Durio zibethinus HOM05D005968 ORTHO05D007158 1.5e-28 129.0 66 87.9
RcHm_v2.0_Chr2g0085611 Rosa chinensis HOM05D005968 ORTHO05D007158 1.5e-28 129.0 66 87.9
Actinidia38673 Actinidia chinensis HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 89.4
arahy.Tifrunner.gnm1.ann1.D6JQQQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
arahy.Tifrunner.gnm1.ann1.HW7BNQ Arachis hypogaea HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
MSTRG.26272 Avicennia marina HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
Ca_21128_v3 Cicer arietinum L. HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
Dinv41378 Davidia involucrata HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
MD15G1144700 Malus domestica HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
TPR.G24830 Trifolium pratense HOM05D005968 ORTHO05D007158 2.0e-28 128.6 66 87.9
Cfa020826 Carpinus fangiana HOM05D002374 ORTHO05D003594 2.6e-28 128.3 66 87.9
Nn2g12378 Nelumbo nucifera HOM05D005968 ORTHO05D007158 2.6e-28 128.3 66 87.9
SGA_v2.0_scaffold347G49545 Striga asiatica HOM05D005968 ORTHO05D007158 3.4e-28 127.9 66 86.4
Cpa.g.sc46.157 Carica papaya HOM05D005968 ORTHO05D007158 4.4e-28 127.5 66 86.4
Psat0s2403g0360 Pisum sativum HOM05D005968 ORTHO05D007158 4.4e-28 127.5 66 87.9
GSVIVG01023606001 Vitis vinifera HOM05D005968 ORTHO05D007158 4.4e-28 127.5 66 87.9
Ciclev10008980m.g Citrus clementina HOM05D005968 ORTHO05D007158 5.8e-28 127.1 66 86.4
Lj7A459G65 Lonicera japonica HOM05D005968 ORTHO05D007158 5.8e-28 127.1 66 87.9
CiPaw.15G168400 Carya illinoinensis HOM05D005968 ORTHO05D007158 7.5e-28 126.7 66 86.4
Prupe.7G263000 Prunus persica HOM05D005968 ORTHO05D007158 7.5e-28 126.7 66 86.4
Sabra18G0090900 Salix brachista HOM05D005968 ORTHO05D007158 7.5e-28 126.7 66 86.4
unitig_52.g17565 Utricularia gibba HOM05D005968 ORTHO05D007158 7.5e-28 126.7 66 87.9
Aqoxy2G01962_Aqoxy2G01963 Aquilegia oxysepala HOM05D005968 ORTHO05D007158 9.8e-28 126.3 66 87.9
Dinv42854 Davidia involucrata HOM05D005968 ORTHO05D007158 9.8e-28 126.3 66 86.4
Lalb_Chr12g0198711 Lupinus albus HOM05D005968 ORTHO05D007158 9.8e-28 126.3 66 86.4
PSO111G0029 Papaver somniferum HOM05D005968 ORTHO05D007158 9.8e-28 126.3 66 86.4
PSO561G0082 Papaver somniferum HOM05D005968 ORTHO05D007158 9.8e-28 126.3 66 86.4
Potri.018G106700 Populus trichocarpa HOM05D005968 ORTHO05D007158 1.3e-27 125.9 66 86.4
MD02G1007400 Malus domestica HOM05D005968 ORTHO05D007158 1.7e-27 125.6 66 86.4
AL7G21190 Arabidopsis lyrata HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
AT4G30900 Arabidopsis thaliana HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
BcaC09g51877 Brassica carinata HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
A01p07280 Brassica napus HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
C01p08040 Brassica napus HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
BolC1t00793H Brassica oleracea HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
BraA01t00677Z Brassica rapa HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
Carub.0007s0964 Capsella rubella HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
DCAR_019393 Daucus carota HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 86.4
Eucgr.C02493 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 87.9
Eucgr.C02540 Eucalyptus grandis HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 87.9
Thhalv10025727m.g Eutrema salsugineum HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
Lsat_1_v5_gn_4_18721 Lactuca sativa HOM05D005968 ORTHO05D007158 2.2e-27 125.2 69 82.6
Sp7g28770 Schrenkiella parvula HOM05D005968 ORTHO05D007158 2.2e-27 125.2 66 84.8
TAR626G1902 Trochodendron aralioides HOM05D005968 ORTHO05D007158 2.2e-27 125.2 65 87.7
Nitab4.5_0003623g0020 Nicotiana tabacum HOM05D005968 ORTHO05D007158 2.9e-27 124.8 62 91.9
Hma1.2p1_0222F.1_g093590 Hydrangea macrophylla HOM05D005968 ORTHO05D007158 4.9e-27 124.0 66 83.3
Sc17g0006690 Simmondsia chinensis HOM05D005968 ORTHO05D007158 4.9e-27 124.0 65 87.7
Zm00001eb086780 Zea mays HOM05D005968 ORTHO05D007158 4.9e-27 124.0 66 83.3
BcaNung03430 Brassica carinata HOM05D005968 ORTHO05D007158 6.4e-27 123.6 66 81.8
PGR102G1528 Punica granatum HOM05D005968 ORTHO05D007158 8.3e-27 123.2 66 86.4
SEGI_19747 Sequoiadendron giganteum HOM05D005968 ORTHO05D007158 8.3e-27 123.2 66 86.4
QL02p093270 Quercus lobata HOM05D005968 ORTHO05D007158 1.4e-26 122.5 66 81.8
ATR0739G020 Amborella trichopoda HOM05D005968 ORTHO05D007158 1.9e-26 122.1 66 84.8
CiPaw.16G111000 Carya illinoinensis HOM05D005968 ORTHO05D007158 1.9e-26 122.1 66 84.8
THA.LOC104803560 Tarenaya hassleriana HOM05D005968 ORTHO05D007158 2.4e-26 121.7 67 83.6
TWI34G0179 Tripterygium wilfordii HOM05D005968 ORTHO05D007158 2.4e-26 121.7 65 84.6
Medtr4g130830 Medicago truncatula HOM05D005968 ORTHO05D007158 4.1e-26 120.9 66 84.8
Zm00001eb420110 Zea mays HOM05D005968 ORTHO05D007158 4.1e-26 120.9 66 81.8
CARHR238800 Cardamine hirsuta HOM05D005968 ORTHO05D007158 5.4e-26 120.6 64 84.4
DCAR_017911 Daucus carota HOM05D005968 ORTHO05D007158 5.4e-26 120.6 66 81.8
Sabra06G0140100 Salix brachista HOM05D005968 ORTHO05D007158 4.6e-25 117.5 88 65.9
CsaV3_1G028970 Cucumis sativus L. HOM05D005968 ORTHO05D007158 3.0e-24 114.8 64 79.7
Sed0018428 Sechium edule HOM05D005968 ORTHO05D007158 1.5e-23 112.5 64 78.1
vmacro06082 Vaccinium macrocarpon HOM05D005968 ORTHO05D007158 5.8e-20 100.5 83 62.7
Mapoly0088s0077 Marchantia polymorpha HOM05D005968 ORTHO05D007158 2.2e-19 98.6 64 67.2
CiPaw.15G168700 Carya illinoinensis HOM05D005968 ORTHO05D007158 4.6e-17 90.9 49 85.7
AagrBONN_evm.TU.Sc2ySwM_362.192 Anthoceros agrestis HOM05D005968 ORTHO05D007158 7.3e-15 83.6 57 63.2
Lsat_1_v5_gn_7_66900 Lactuca sativa HOM05D005968 ORTHO05D007158 8.1e-14 80.1 69 60.9
Haze_19205 Corylus avellana HOM05D005968 ORTHO05D007158 4.4e-12 74.3 42 83.3


User provided reference genes

Program Settings