Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006114g0020 Nicotiana tabacum HOM05D003771 ORTHO05D004396 4.0e-180 634.8 354 100.0
Nitab4.5_0000019g0010 Nicotiana tabacum HOM05D003771 ORTHO05D004396 1.6e-128 463.4 265 99.6
Sopen05g020060 Solanum pennellii HOM05D003771 ORTHO05D004396 3.3e-118 429.1 270 91.9
CSS0004980 Camellia sinensis var. sinensis HOM05D003771 ORTHO05D004396 6.7e-111 404.8 274 82.5
Actinidia02465 Actinidia chinensis HOM05D003771 ORTHO05D004396 5.6e-110 401.7 275 84.0
CAN.G587.52 Capsicum annuum HOM05D003771 ORTHO05D004396 1.3e-109 400.6 215 95.8
Cc06_g23760 Coffea canephora HOM05D003771 ORTHO05D004396 8.2e-109 397.9 279 85.7
MSTRG.26513 Avicennia marina HOM05D003771 ORTHO05D004396 1.4e-108 397.1 277 85.2
SGA_v2.0_scaffold21G09599 Striga asiatica HOM05D003771 ORTHO05D004396 1.8e-108 396.7 274 84.3
Oeu008632.1 Olea europaea HOM05D003771 ORTHO05D004396 5.3e-108 395.2 273 83.5
DCAR_020453 Daucus carota HOM05D003771 ORTHO05D004396 1.5e-107 393.7 276 81.5
TAR383G0820 Trochodendron aralioides HOM05D003771 ORTHO05D004396 3.4e-107 392.5 274 77.0
Dinv12623 Davidia involucrata HOM05D003771 ORTHO05D004396 1.7e-106 390.2 275 82.2
vmacro20746 Vaccinium macrocarpon HOM05D003771 ORTHO05D004396 8.4e-106 387.9 289 76.8
GSVIVG01022289001 Vitis vinifera HOM05D003771 ORTHO05D004396 4.2e-105 385.6 275 79.6
Nn3g19428 Nelumbo nucifera HOM05D003771 ORTHO05D004396 4.6e-104 382.1 276 74.3
TWI34G0561 Tripterygium wilfordii HOM05D003771 ORTHO05D004396 4.6e-104 382.1 279 73.5
SalBow5G2520 Salvia bowleyana HOM05D003771 ORTHO05D004396 1.3e-103 380.6 291 76.3
MELO3C009070.2 Cucumis melo HOM05D003771 ORTHO05D004396 2.3e-103 379.8 284 78.2
CsaV3_4G031470 Cucumis sativus L. HOM05D003771 ORTHO05D004396 2.3e-103 379.8 284 78.2
ClCG04G000570 Citrullus lanatus HOM05D003771 ORTHO05D004396 3.0e-103 379.4 284 78.2
Nn1g00173 Nelumbo nucifera HOM05D003771 ORTHO05D004396 3.0e-103 379.4 279 78.1
Sc06g0002410 Simmondsia chinensis HOM05D003771 ORTHO05D004396 3.0e-103 379.4 277 79.1
Migut.L01925 Erythranthe guttata HOM05D003771 ORTHO05D004396 5.1e-103 378.6 276 80.8
TPR.G25458 Trifolium pratense HOM05D003771 ORTHO05D004396 6.7e-103 378.3 273 78.4
Sed0018603 Sechium edule HOM05D003771 ORTHO05D004396 1.9e-102 376.7 284 75.0
Ca_17443_v3 Cicer arietinum L. HOM05D003771 ORTHO05D004396 3.3e-102 375.9 273 77.7
Medtr8g100105 Medicago truncatula HOM05D003771 ORTHO05D004396 3.3e-102 375.9 273 77.3
QL11p007303 Quercus lobata HOM05D003771 ORTHO05D004396 3.3e-102 375.9 275 73.5
Ah.04g162600 Amaranthus hybridus HOM05D003771 ORTHO05D004396 4.3e-102 375.6 296 76.4
Psat7g020760 Pisum sativum HOM05D003771 ORTHO05D004396 7.4e-102 374.8 273 79.1
CiPaw.15G162500 Carya illinoinensis HOM05D003771 ORTHO05D004396 9.7e-102 374.4 274 73.4
PSO063G0153 Papaver somniferum HOM05D003771 ORTHO05D004396 9.7e-102 374.4 273 74.0
PSO782G3876 Papaver somniferum HOM05D003771 ORTHO05D004396 9.7e-102 374.4 273 74.0
COL.COLO4_37655 Corchorus olitorius HOM05D003771 ORTHO05D004396 1.3e-101 374.0 284 77.1
Glyma.05G220300 Glycine max HOM05D003771 ORTHO05D004396 2.8e-101 372.9 274 70.8
Sabra18G0126200 Salix brachista HOM05D003771 ORTHO05D004396 3.7e-101 372.5 287 70.7
Cpa.g.sc91.64 Carica papaya HOM05D003771 ORTHO05D004396 4.8e-101 372.1 283 76.0
Thecc.09G205400 Theobroma cacao HOM05D003771 ORTHO05D004396 1.1e-100 370.9 281 77.2
Glyma.08G026700 Glycine max HOM05D003771 ORTHO05D004396 1.4e-100 370.5 274 74.8
Manes.02G223900 Manihot esculenta HOM05D003771 ORTHO05D004396 1.4e-100 370.5 289 70.9
Lj4g0002190 Lotus japonicus HOM05D003771 ORTHO05D004396 1.8e-100 370.2 276 74.6
Eucgr.E04317 Eucalyptus grandis HOM05D003771 ORTHO05D004396 2.4e-100 369.8 274 77.0
Phvul.002G302000 Phaseolus vulgaris HOM05D003771 ORTHO05D004396 3.1e-100 369.4 274 71.9
VMungo0251G3699 Vigna mungo HOM05D003771 ORTHO05D004396 3.1e-100 369.4 274 75.2
Ciclev10007279m.g Citrus clementina HOM05D003771 ORTHO05D004396 5.3e-100 368.6 290 74.8
CANSAT64G2070 Cannabis sativa HOM05D003771 ORTHO05D004396 6.9e-100 368.2 280 76.8
Atru.chr12.1314 Acer truncatum HOM05D003771 ORTHO05D004396 2.6e-99 366.3 291 72.9
MBI14_g32940_MAGBIO Magnolia biondii HOM05D003771 ORTHO05D004396 2.6e-99 366.3 273 77.7
PGR044G2258 Punica granatum HOM05D003771 ORTHO05D004396 2.6e-99 366.3 275 73.1
Duzib168G1435 Durio zibethinus HOM05D003771 ORTHO05D004396 3.4e-99 365.9 286 75.5
Gohir.D05G000400 Gossypium hirsutum HOM05D003771 ORTHO05D004396 5.9e-99 365.2 284 75.7
Gorai.009G000200 Gossypium raimondii HOM05D003771 ORTHO05D004396 5.9e-99 365.2 284 75.7
Prupe.7G042600 Prunus persica HOM05D003771 ORTHO05D004396 5.9e-99 365.2 295 72.9
ATR0626G390 Amborella trichopoda HOM05D003771 ORTHO05D004396 1.3e-98 364.0 274 76.3
Gohir.A05G000200 Gossypium hirsutum HOM05D003771 ORTHO05D004396 1.3e-98 364.0 284 75.4
FvH4_4g00210 Fragaria vesca HOM05D003771 ORTHO05D004396 5.0e-98 362.1 288 74.3
Potri.018G149400 Populus trichocarpa HOM05D003771 ORTHO05D004396 8.5e-98 361.3 292 73.6
RcHm_v2.0_Chr4g0384941 Rosa chinensis HOM05D003771 ORTHO05D004396 1.4e-97 360.5 294 72.4
HanXRQChr02g0040541 Helianthus annuus HOM05D003771 ORTHO05D004396 1.9e-97 360.1 280 73.9
Lalb_Chr05g0223831 Lupinus albus HOM05D003771 ORTHO05D004396 1.9e-97 360.1 276 73.9
Aqoxy3G04250 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 3.2e-97 359.4 273 70.7
FAN22G1465 Fragaria x ananassa HOM05D003771 ORTHO05D004396 3.2e-97 359.4 285 72.6
MD04G1002300 Malus domestica HOM05D003771 ORTHO05D004396 4.2e-97 359.0 298 71.8
FAN17G2138 Fragaria x ananassa HOM05D003771 ORTHO05D004396 1.2e-96 357.5 287 72.8
Lj5A798G49 Lonicera japonica HOM05D003771 ORTHO05D004396 1.2e-96 357.5 234 79.1
ECA233G1083 Erigeron canadensis HOM05D003771 ORTHO05D004396 2.1e-96 356.7 279 75.6
FAN12G2055 Fragaria x ananassa HOM05D003771 ORTHO05D004396 3.6e-96 355.9 296 71.6
Aa31sc328G10 Aethionema arabicum HOM05D003771 ORTHO05D004396 1.8e-95 353.6 286 74.8
Lsat_1_v5_gn_1_6680 Lactuca sativa HOM05D003771 ORTHO05D004396 1.8e-95 353.6 274 72.3
BcaB01g04159 Brassica carinata HOM05D003771 ORTHO05D004396 2.3e-95 353.2 283 68.6
Sp6g13880 Schrenkiella parvula HOM05D003771 ORTHO05D004396 1.5e-94 350.5 286 73.4
A03p16060 Brassica napus HOM05D003771 ORTHO05D004396 1.9e-94 350.1 283 73.1
BraA03t10897Z Brassica rapa HOM05D003771 ORTHO05D004396 1.9e-94 350.1 283 73.1
BcaC01g06134 Brassica carinata HOM05D003771 ORTHO05D004396 2.5e-94 349.7 284 72.5
Thhalv10012482m.g Eutrema salsugineum HOM05D003771 ORTHO05D004396 5.7e-94 348.6 286 72.0
Haze_19080 Corylus avellana HOM05D003771 ORTHO05D004396 9.7e-94 347.8 338 60.1
C03p18900 Brassica napus HOM05D003771 ORTHO05D004396 1.3e-93 347.4 283 72.8
THA.LOC104808936 Tarenaya hassleriana HOM05D003771 ORTHO05D004396 1.7e-93 347.1 294 69.4
Zm00001eb011800 Zea mays HOM05D003771 ORTHO05D004396 2.2e-93 346.7 273 69.6
BcaB08g35516 Brassica carinata HOM05D003771 ORTHO05D004396 4.8e-93 345.5 283 71.7
C09p41060 Brassica napus HOM05D003771 ORTHO05D004396 1.4e-92 344.0 293 68.9
AL3G44140 Arabidopsis lyrata HOM05D003771 ORTHO05D004396 1.8e-92 343.6 286 71.0
AT2G07360 Arabidopsis thaliana HOM05D003771 ORTHO05D004396 1.8e-92 343.6 286 71.3
Carub.0013s0005 Capsella rubella HOM05D003771 ORTHO05D004396 1.8e-92 343.6 286 71.3
A10p09550 Brassica napus HOM05D003771 ORTHO05D004396 3.1e-92 342.8 293 69.3
MD15G1427900 Malus domestica HOM05D003771 ORTHO05D004396 4.1e-92 342.4 283 70.7
HPP92_018039 Vanilla planifolia HOM05D003771 ORTHO05D004396 4.1e-92 342.4 266 71.1
BolC9t56986H Brassica oleracea HOM05D003771 ORTHO05D004396 5.3e-92 342.0 293 68.6
CARHR104050 Cardamine hirsuta HOM05D003771 ORTHO05D004396 5.3e-92 342.0 286 70.6
BcaC04g20648 Brassica carinata HOM05D003771 ORTHO05D004396 9.1e-92 341.3 288 69.4
AUR62034148 Chenopodium quinoa HOM05D003771 ORTHO05D004396 2.0e-91 340.1 250 78.8
Lju50C19G3 Lonicera japonica HOM05D003771 ORTHO05D004396 2.0e-91 340.1 280 72.5
BraA10t43030Z Brassica rapa HOM05D003771 ORTHO05D004396 7.7e-91 338.2 241 74.7
BolC3t14282H Brassica oleracea HOM05D003771 ORTHO05D004396 1.0e-90 337.8 304 67.8
AUR62014286 Chenopodium quinoa HOM05D003771 ORTHO05D004396 8.5e-90 334.7 250 79.6
Solyc05g025750.3 Solanum lycopersicum HOM05D003771 ORTHO05D004396 7.9e-88 328.2 208 93.3
SEGI_40037 Sequoiadendron giganteum HOM05D003771 ORTHO05D004396 5.7e-86 322.0 274 63.9
Peaxi162Scf00322g01516 Petunia axillaris HOM05D003771 ORTHO05D004396 4.1e-84 315.8 208 90.4
HanXRQChr05g0138991 Helianthus annuus HOM05D003771 ORTHO05D004396 1.4e-81 307.4 203 78.3
arahy.Tifrunner.gnm1.ann1.TH49EC Arachis hypogaea HOM05D003771 ORTHO05D004396 6.1e-80 302.0 301 63.1
arahy.Tifrunner.gnm1.ann1.XKPK2Z Arachis hypogaea HOM05D003771 ORTHO05D004396 3.9e-79 299.3 299 63.2
CDE07G1201 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 8.2e-77 291.6 274 63.1
unitig_899.g15420 Utricularia gibba HOM05D003771 ORTHO05D004396 7.7e-75 285.0 223 72.2
AagrBONN_evm.TU.Sc2ySwM_228.3008 Anthoceros agrestis HOM05D003771 ORTHO05D004396 5.7e-70 268.9 272 55.9
AagrBONN_evm.TU.Sc2ySwM_228.2996 Anthoceros agrestis HOM05D003771 ORTHO05D004396 9.7e-70 268.1 271 55.0
AagrBONN_evm.TU.Sc2ySwM_369.330 Anthoceros agrestis HOM05D003771 ORTHO05D004396 9.7e-70 268.1 271 55.0
Mapoly0015s0202 Marchantia polymorpha HOM05D003771 ORTHO05D004396 1.7e-61 240.7 283 49.5
Pp3c15_18470 Physcomitrium patens HOM05D003771 ORTHO05D004396 1.8e-60 237.3 281 49.5
Lsat_1_v5_gn_8_70001 Lactuca sativa HOM05D003771 ORTHO05D004396 2.7e-59 233.4 206 63.6
Oeu036958.1 Olea europaea HOM05D003771 ORTHO05D004396 7.7e-59 231.9 142 82.4
Os03g0265700 Oryza sativa ssp. japonica HOM05D003771 ORTHO05D004396 4.4e-54 216.1 139 76.3
Aqoxy3G02692 Aquilegia oxysepala HOM05D003771 ORTHO05D004396 1.1e-41 174.9 139 66.2
TAR633G1498 Trochodendron aralioides HOM05D003771 ORTHO05D004396 7.5e-38 162.2 142 66.2
Oeu036959.1 Olea europaea HOM05D003771 ORTHO05D004396 3.7e-37 159.8 132 79.5
SMO367G0435 Selaginella moellendorffii HOM05D003771 ORTHO05D004396 3.2e-36 156.8 139 60.4
SHI04092 Sapria himalayana HOM05D003771 ORTHO05D004396 2.6e-30 137.1 149 56.4
Rhsim01G0106700 Rhododendron simsii HOM05D003771 ORTHO05D004396 8.4e-21 105.5 66 75.8
MD07G1055500 Malus domestica HOM05D003771 ORTHO05D004396 4.6e-19 99.8 60 81.7
Hund03218 Selenicereus undatus HOM05D003771 ORTHO05D004396 5.1e-18 96.3 64 75.0
CBR_g10827 Chara braunii HOM05D003771 ORTHO05D004396 6.0e-11 72.8 238 25.6
CDE06G2293 Ceratophyllum demersum HOM05D003771 ORTHO05D004396 9.9e-06 55.5 85 49.4


User provided reference genes

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