Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006104g0010 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.5e-121 439.5 217 100.0
Nitab4.5_0001095g0030 Nicotiana tabacum HOM05D007739 ORTHO05D009838 1.5e-92 343.2 217 82.5
Sopen07g027120 Solanum pennellii HOM05D007739 ORTHO05D009838 1.5e-81 306.6 217 72.4
Solyc07g055110.3 Solanum lycopersicum HOM05D007739 ORTHO05D009838 7.5e-81 304.3 217 72.8
PGSC0003DMG400020420 Solanum tuberosum HOM05D007739 ORTHO05D009838 7.8e-78 294.3 211 72.0
Peaxi162Scf00469g00320 Petunia axillaris HOM05D007739 ORTHO05D009838 1.1e-66 257.3 218 64.7
CSS0046040 Camellia sinensis var. sinensis HOM05D007739 ORTHO05D009838 1.9e-39 166.8 221 51.6
Dinv36186 Davidia involucrata HOM05D002367 ORTHO05D002566 1.5e-36 157.1 218 49.1
GSVIVG01037253001 Vitis vinifera HOM05D007739 ORTHO05D009838 7.6e-33 144.8 213 48.4
Actinidia11663 Actinidia chinensis HOM05D007739 ORTHO05D009838 7.1e-31 138.3 220 45.0
Rhsim01G0194300 Rhododendron simsii HOM05D007739 ORTHO05D009838 3.5e-30 136.0 216 44.0
Cfa009840 Carpinus fangiana HOM05D007739 ORTHO05D009838 7.9e-30 134.8 207 47.3
PGR119G1777 Punica granatum HOM05D007739 ORTHO05D009838 1.1e-28 131.0 215 44.2
VMungo0647G2062 Vigna mungo HOM05D007739 ORTHO05D009838 1.1e-28 131.0 248 39.5
Ca_06221_v3 Cicer arietinum L. HOM05D007739 ORTHO05D009838 2.1e-27 126.7 219 42.9
Cc01_g05640 Coffea canephora HOM05D007739 ORTHO05D009838 2.8e-27 126.3 216 43.1
LjContig00049g0023861 Lotus japonicus HOM05D007739 ORTHO05D009838 4.8e-27 125.6 218 42.7
Phvul.008G200100 Phaseolus vulgaris HOM05D007739 ORTHO05D009838 6.3e-27 125.2 219 44.3
CiPaw.14G114800 Carya illinoinensis HOM05D007739 ORTHO05D009838 1.4e-26 124.0 218 45.0
Haze_23208 Corylus avellana HOM05D007739 ORTHO05D009838 3.1e-26 122.9 191 46.1
DCAR_002115 Daucus carota HOM05D007739 ORTHO05D009838 3.1e-26 122.9 224 42.9
Oeu001493.2 Olea europaea HOM05D007739 ORTHO05D009838 4.1e-26 122.5 242 38.8
SalBow6G6289 Salvia bowleyana HOM05D007739 ORTHO05D009838 5.3e-26 122.1 240 39.2
Glyma.02G280600 Glycine max HOM05D007739 ORTHO05D009838 6.9e-26 121.7 217 43.8
Migut.D00651 Erythranthe guttata HOM05D007739 ORTHO05D009838 1.2e-25 120.9 230 40.9
MSTRG.21351 Avicennia marina HOM05D007739 ORTHO05D009838 4.5e-25 119.0 239 35.1
ECA233G0993 Erigeron canadensis HOM05D007739 ORTHO05D009838 7.6e-25 118.2 216 39.8
TPR.G19359 Trifolium pratense HOM05D007739 ORTHO05D009838 3.8e-24 115.9 219 39.7
TAR633G0364 Trochodendron aralioides HOM05D007739 ORTHO05D009838 8.5e-24 114.8 220 40.5
Glyma.14G034000 Glycine max HOM05D007739 ORTHO05D009838 4.2e-23 112.5 218 41.3
SGA_v2.0_scaffold29G12264 Striga asiatica HOM05D007739 ORTHO05D009838 9.3e-23 111.3 220 39.1
Potri.009G072000 Populus trichocarpa HOM05D007739 ORTHO05D009838 2.7e-22 109.8 219 37.4
Sc03g0010980 Simmondsia chinensis HOM05D007739 ORTHO05D009838 3.7e-19 99.4 208 38.5
Thhalv10014740m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 4.8e-19 99.0 219 33.3
Sp6g31280 Schrenkiella parvula HOM05D007739 ORTHO05D009838 6.3e-19 98.6 219 35.6
AL6G23160 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 4.1e-18 95.9 220 33.2
Aa31LG3G14870 Aethionema arabicum HOM05D007739 ORTHO05D009838 3.4e-17 92.8 220 37.3
AT5G12360 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.0e-16 91.3 220 33.6
AT3G14190 Arabidopsis thaliana HOM05D007739 ORTHO05D009838 1.1e-15 87.8 221 33.0
Lsat_1_v5_gn_5_70921 Lactuca sativa HOM05D007739 ORTHO05D009838 1.1e-15 87.8 218 36.7
C03p46780 Brassica napus HOM05D007739 ORTHO05D009838 1.4e-15 87.4 216 34.7
TAR633G2358 Trochodendron aralioides HOM05D007739 ORTHO05D009838 1.9e-15 87.0 221 35.7
Thhalv10021564m.g Eutrema salsugineum HOM05D007739 ORTHO05D009838 2.5e-15 86.7 223 34.1
Cpa.g.sc157.69 Carica papaya HOM05D007739 ORTHO05D009838 4.2e-15 85.9 215 38.1
AL3G26440 Arabidopsis lyrata HOM05D007739 ORTHO05D009838 5.5e-15 85.5 221 32.6
BolC9t59287H Brassica oleracea HOM05D007739 ORTHO05D009838 9.4e-15 84.7 220 34.1
BcaC01g03953 Brassica carinata HOM05D007739 ORTHO05D009838 1.6e-14 84.0 219 35.2
BolC3t16943H Brassica oleracea HOM05D007739 ORTHO05D009838 1.6e-14 84.0 216 34.3
A10p25460 Brassica napus HOM05D007739 ORTHO05D009838 3.6e-14 82.8 220 34.5
THA.LOC104815614 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 3.6e-14 82.8 219 35.6
Sp3g12450 Schrenkiella parvula HOM05D007739 ORTHO05D009838 4.6e-14 82.4 213 33.8
A03p38660 Brassica napus HOM05D007739 ORTHO05D009838 6.1e-14 82.0 222 33.8
C09p64530 Brassica napus HOM05D007739 ORTHO05D009838 6.1e-14 82.0 220 33.6
BraA03t13013Z Brassica rapa HOM05D007739 ORTHO05D009838 6.1e-14 82.0 222 33.8
BcaB04g18824 Brassica carinata HOM05D007739 ORTHO05D009838 1.4e-13 80.9 224 33.5
BraA10t44610Z Brassica rapa HOM05D007739 ORTHO05D009838 2.3e-13 80.1 223 32.7
CARHR200750 Cardamine hirsuta HOM05D007739 ORTHO05D009838 3.0e-13 79.7 198 34.3
THA.LOC104815612 Tarenaya hassleriana HOM05D007739 ORTHO05D009838 3.0e-13 79.7 219 35.2
Carub.0003s1380 Capsella rubella HOM05D007739 ORTHO05D009838 1.5e-12 77.4 208 32.7
BolC1t04996H Brassica oleracea HOM05D007739 ORTHO05D009838 7.4e-12 75.1 215 31.6
unitig_578.g16651 Utricularia gibba HOM05D007739 ORTHO05D009838 1.3e-11 74.3 208 32.7
C01p50440 Brassica napus HOM05D007739 ORTHO05D009838 4.8e-11 72.4 215 31.6
BcaNung07312 Brassica carinata HOM05D007739 ORTHO05D009838 1.4e-10 70.9 214 33.6
A01p39500 Brassica napus HOM05D007739 ORTHO05D009838 5.3e-10 68.9 210 30.5
CARHR089070 Cardamine hirsuta HOM05D007739 ORTHO05D009838 6.9e-10 68.6 214 31.8
BraA01t03991Z Brassica rapa HOM05D007739 ORTHO05D009838 1.5e-09 67.4 210 30.0
Aa31LG8G1440 Aethionema arabicum HOM05D007739 ORTHO05D009838 4.2e-07 59.3 110 34.5


User provided reference genes

Program Settings