Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006096g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 2.9e-28 127.9 65 100.0
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 3.5e-10 67.8 32 100.0
Sed0000516 Sechium edule HOM05D008037 ORTHO05D004271 3.5e-10 67.8 32 100.0
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 3.5e-10 67.8 32 100.0
CAN.G1298.17 Capsicum annuum HOM05D001070 ORTHO05D004271 6.1e-10 67.0 37 86.5
arahy.Tifrunner.gnm1.ann1.TT5YJH Arachis hypogaea HOM05D007952 ORTHO05D009823 1.0e-09 66.2 31 100.0
VMungo0720G2248 Vigna mungo HOM05D001966 ORTHO05D007227 1.0e-09 66.2 31 100.0
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 1.0e-09 66.2 31 100.0
Nitab4.5_0008813g0010 Nicotiana tabacum HOM05D007952 ORTHO05D004271 1.8e-09 65.5 34 88.2
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 1.8e-09 65.5 32 96.9
Lj1g0013448 Lotus japonicus HOM05D007952 ORTHO05D009823 2.3e-09 65.1 32 96.9
arahy.Tifrunner.gnm1.ann1.B37VQ6 Arachis hypogaea HOM05D007952 ORTHO05D009823 3.0e-09 64.7 31 96.8
arahy.Tifrunner.gnm1.ann1.XGYT8C Arachis hypogaea HOM05D008037 ORTHO05D004271 3.0e-09 64.7 32 93.8
Peaxi162Scf00475g00112 Petunia axillaris HOM05D007952 ORTHO05D004271 5.1e-09 63.9 31 90.3
Lj4g0016112 Lotus japonicus HOM05D007952 ORTHO05D009823 6.7e-09 63.5 32 93.8
Nitab4.5_0027992g0040 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.7e-09 63.5 32 93.8
SabraPtG0006400 Salix brachista HOM05D012647 ORTHO05D014727 6.7e-09 63.5 31 96.8
Peaxi162Scf00136g00086 Petunia axillaris HOM05D007952 ORTHO05D004271 8.7e-09 63.2 31 96.8
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 1.1e-08 62.8 31 93.5
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.5e-08 62.4 32 87.5
Glyma.19G187300 Glycine max HOM05D007952 ORTHO05D004271 1.9e-08 62.0 46 65.2
Psat0s1116g0080 Pisum sativum HOM05D004182 ORTHO05D007321 2.5e-08 61.6 32 90.6
Lsat_1_v5_gn_5_36201 Lactuca sativa HOM05D048309 ORTHO05D031508 5.7e-08 60.5 28 100.0
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 5.7e-08 60.5 28 100.0
EL10Ac6g15366 Beta vulgaris HOM05D007952 ORTHO05D009823 2.4e-06 55.1 31 80.6
CAN.G262.4 Capsicum annuum HOM05D007952 ORTHO05D009823 2.4e-06 55.1 37 70.3
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 4.1e-06 54.3 28 89.3


User provided reference genes

Program Settings