Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006095g0050 Nicotiana tabacum HOM05D002150 ORTHO05D002191 4.5e-65 251.1 129 100.0
Solyc05g054530.1 Solanum lycopersicum HOM05D002150 ORTHO05D002191 1.1e-23 113.6 93 68.8
Sopen05g033010 Solanum pennellii HOM05D002150 ORTHO05D002191 1.9e-23 112.8 93 67.7
PGSC0003DMG400023425 Solanum tuberosum HOM05D002150 ORTHO05D002191 4.7e-22 108.2 93 65.6
QL08p059179 Quercus lobata HOM05D002150 ORTHO05D002191 7.5e-12 74.3 101 43.6
CiPaw.01G285100 Carya illinoinensis HOM05D002150 ORTHO05D002191 4.9e-11 71.6 103 40.8
Hma1.2p1_1263F.1_g271270 Hydrangea macrophylla HOM05D002150 ORTHO05D002191 2.4e-10 69.3 101 44.6
Manes.07G114700 Manihot esculenta HOM05D002150 ORTHO05D002191 5.4e-10 68.2 100 40.0
Potri.010G206100 Populus trichocarpa HOM05D002150 ORTHO05D002191 9.2e-10 67.4 113 38.9
Dinv26001 Davidia involucrata HOM05D002150 ORTHO05D002191 1.6e-09 66.6 90 47.8
Prupe.6G080000 Prunus persica HOM05D002150 ORTHO05D002191 2.7e-09 65.9 107 38.3
HanXRQChr14g0458181 Helianthus annuus HOM05D002150 ORTHO05D002191 3.5e-09 65.5 76 52.6
Nn5g26936 Nelumbo nucifera HOM05D002150 ORTHO05D002191 6.0e-09 64.7 98 40.8
Cfa001494 Carpinus fangiana HOM05D002150 ORTHO05D002191 7.8e-09 64.3 95 40.0
Sabra10G0159300 Salix brachista HOM05D002150 ORTHO05D002191 7.8e-09 64.3 100 39.0
Haze_17047 Corylus avellana HOM05D002150 ORTHO05D002191 1.3e-08 63.5 97 39.2
Haze_24076 Corylus avellana HOM05D002150 ORTHO05D002191 2.3e-08 62.8 100 41.0
Potri.008G054400 Populus trichocarpa HOM05D002150 ORTHO05D002191 2.3e-08 62.8 113 35.4
Duzib114G0657 Durio zibethinus HOM05D002150 ORTHO05D002191 3.0e-08 62.4 83 42.2
FAN25G2559 Fragaria x ananassa HOM05D002150 ORTHO05D002191 3.0e-08 62.4 104 39.4
FvH4_3g35750 Fragaria vesca HOM05D002150 ORTHO05D002191 5.0e-08 61.6 104 39.4
FAN11G3229 Fragaria x ananassa HOM05D002150 ORTHO05D002191 5.0e-08 61.6 104 39.4
Thecc.10G044300 Theobroma cacao HOM05D002150 ORTHO05D002191 5.0e-08 61.6 103 37.9
Cpa.g.sc1.395 Carica papaya HOM05D002150 ORTHO05D002191 6.6e-08 61.2 106 39.6
FAN21G2799 Fragaria x ananassa HOM05D002150 ORTHO05D002191 8.6e-08 60.8 104 38.5
CiPaw.02G183100 Carya illinoinensis HOM05D002150 ORTHO05D002191 1.1e-07 60.5 97 40.2
Ciclev10032119m.g Citrus clementina HOM05D002150 ORTHO05D002191 1.9e-07 59.7 100 40.0
Lsat_1_v5_gn_8_15640 Lactuca sativa HOM05D002150 ORTHO05D002191 1.9e-07 59.7 61 52.5
RcHm_v2.0_Chr5g0063921 Rosa chinensis HOM05D002150 ORTHO05D002191 1.9e-07 59.7 103 37.9
CSS0006598 Camellia sinensis var. sinensis HOM05D002150 ORTHO05D002191 3.3e-07 58.9 86 46.5
CiPaw.14G070000 Carya illinoinensis HOM05D002150 ORTHO05D002191 4.3e-07 58.5 99 37.4
Lj8C85T13 Lonicera japonica HOM05D002150 ORTHO05D002191 5.6e-07 58.2 93 39.8
Potri.009G029300 Populus trichocarpa HOM05D002150 ORTHO05D002191 9.5e-07 57.4 99 40.4
QL01p032435 Quercus lobata HOM05D002150 ORTHO05D002191 1.2e-06 57.0 100 40.0
Sabra09G0020400 Salix brachista HOM05D002150 ORTHO05D002191 1.2e-06 57.0 105 35.2
Sc09g0007040 Simmondsia chinensis HOM05D002150 ORTHO05D002191 1.2e-06 57.0 88 43.2
MD00G1137200 Malus domestica HOM05D002150 ORTHO05D002191 1.6e-06 56.6 108 36.1
Manes.04G033700 Manihot esculenta HOM05D002150 ORTHO05D002191 1.6e-06 56.6 98 38.8
arahy.Tifrunner.gnm1.ann1.1I7MJM Arachis hypogaea HOM05D002150 ORTHO05D002191 2.1e-06 56.2 85 42.4
MD11G1111600 Malus domestica HOM05D002150 ORTHO05D002191 2.8e-06 55.8 114 36.0
Oeu059722.1 Olea europaea HOM05D002150 ORTHO05D002191 2.8e-06 55.8 61 50.8
Prupe.2G233200 Prunus persica HOM05D002150 ORTHO05D002191 2.8e-06 55.8 103 37.9
FvH4_7g22100 Fragaria vesca HOM05D002150 ORTHO05D002191 3.6e-06 55.5 104 37.5
FAN06G2166 Fragaria x ananassa HOM05D002150 ORTHO05D002191 3.6e-06 55.5 104 37.5
FAN01G1666 Fragaria x ananassa HOM05D002150 ORTHO05D002191 4.7e-06 55.1 104 37.5
FAN03G0145 Fragaria x ananassa HOM05D002150 ORTHO05D002191 4.7e-06 55.1 104 37.5
FAN06G3415 Fragaria x ananassa HOM05D002150 ORTHO05D002191 4.7e-06 55.1 104 37.5
FAN10G3914 Fragaria x ananassa HOM05D002150 ORTHO05D002191 4.7e-06 55.1 104 37.5
Hma1.2p1_1888F.1_g306540 Hydrangea macrophylla HOM05D002150 ORTHO05D002191 4.7e-06 55.1 104 37.5
Rhsim13G0084200 Rhododendron simsii HOM05D002150 ORTHO05D002191 4.7e-06 55.1 101 32.7
Actinidia02955 Actinidia chinensis HOM05D002150 ORTHO05D002191 6.2e-06 54.7 78 47.4
TWI75G0586 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 6.2e-06 54.7 97 34.0
vmacro03087 Vaccinium macrocarpon HOM05D002150 ORTHO05D002191 6.2e-06 54.7 105 37.1
Eucgr.J02060 Eucalyptus grandis HOM05D002150 ORTHO05D002191 8.1e-06 54.3 79 43.0
TWI38G0694 Tripterygium wilfordii HOM05D002150 ORTHO05D002191 8.1e-06 54.3 104 34.6


User provided reference genes

Program Settings