Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006089g0070 Nicotiana tabacum HOM05D001970 ORTHO05D006581 3.9e-51 204.5 105 100.0
Nitab4.5_0011810g0030 Nicotiana tabacum HOM05D001970 ORTHO05D006581 6.3e-49 197.2 105 96.2
Peaxi162Scf00002g05423 Petunia axillaris HOM05D001970 ORTHO05D006581 6.5e-46 187.2 108 90.7
CAN.G644.23 Capsicum annuum HOM05D001970 ORTHO05D006581 4.8e-41 171.0 106 82.1
PGSC0003DMG400026540 Solanum tuberosum HOM05D001970 ORTHO05D006581 3.4e-39 164.9 104 82.7
Solyc11g066950.2 Solanum lycopersicum HOM05D001970 ORTHO05D006581 3.8e-38 161.4 104 81.7
Sopen11g026670 Solanum pennellii HOM05D001970 ORTHO05D006581 1.9e-37 159.1 103 80.6
Oeu048489.1 Olea europaea HOM05D001970 ORTHO05D006581 1.6e-36 156.0 106 75.5
MSTRG.12357 Avicennia marina HOM05D001970 ORTHO05D006581 2.1e-36 155.6 100 77.0
Migut.N02510 Erythranthe guttata HOM05D001970 ORTHO05D006581 2.1e-36 155.6 108 72.2
Oeu051618.1 Olea europaea HOM05D001970 ORTHO05D006581 6.1e-36 154.1 100 76.0
SGA_v2.0_scaffold83G26424 Striga asiatica HOM05D001970 ORTHO05D006581 1.4e-35 152.9 106 75.5
Duzib168G1330 Durio zibethinus HOM05D001970 ORTHO05D006581 3.9e-35 151.4 102 74.5
MSTRG.17724 Avicennia marina HOM05D001970 ORTHO05D006581 5.1e-35 151.0 106 73.6
Duzib170G0409 Durio zibethinus HOM05D001970 ORTHO05D006581 5.1e-35 151.0 102 74.5
Peaxi162Scf00002g00529 Petunia axillaris HOM05D001970 ORTHO05D006581 5.7e-34 147.5 109 68.8
Hma1.2p1_0695F.1_g204430 Hydrangea macrophylla HOM05D001970 ORTHO05D006581 7.4e-34 147.1 102 73.5
Ciclev10029614m.g Citrus clementina HOM05D001970 ORTHO05D006581 1.7e-33 146.0 103 71.8
Peaxi162Scf00002g00534 Petunia axillaris HOM05D001970 ORTHO05D006581 1.7e-33 146.0 109 67.9
Dinv12514 Davidia involucrata HOM05D001970 ORTHO05D006581 2.8e-33 145.2 103 69.9
Gohir.A05G083300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 3.7e-33 144.8 102 70.6
Cc01_g09730 Coffea canephora HOM05D001970 ORTHO05D006581 4.8e-33 144.4 103 71.8
SalBow3G0645 Salvia bowleyana HOM05D001970 ORTHO05D006581 4.8e-33 144.4 105 69.5
Thecc.09G290500 Theobroma cacao HOM05D001970 ORTHO05D006581 6.3e-33 144.1 102 70.6
Gohir.D05G086300 Gossypium hirsutum HOM05D001970 ORTHO05D006581 8.2e-33 143.7 102 70.6
QL01p013573 Quercus lobata HOM05D001970 ORTHO05D006581 8.2e-33 143.7 102 69.6
Actinidia07215 Actinidia chinensis HOM05D001970 ORTHO05D006581 1.4e-32 142.9 102 69.6
Gorai.009G087900 Gossypium raimondii HOM05D001970 ORTHO05D006581 1.4e-32 142.9 102 70.6
Sc12g0004240 Simmondsia chinensis HOM05D001970 ORTHO05D006581 1.4e-32 142.9 104 67.3
Lsat_1_v5_gn_1_62140 Lactuca sativa HOM05D001970 ORTHO05D006581 1.8e-32 142.5 102 68.6
CSS0025337 Camellia sinensis var. sinensis HOM05D001970 ORTHO05D006581 3.1e-32 141.7 102 69.6
COL.COLO4_19307 Corchorus olitorius HOM05D001970 ORTHO05D006581 3.1e-32 141.7 102 69.6
Dinv29432 Davidia involucrata HOM05D001970 ORTHO05D006581 5.3e-32 141.0 106 67.9
Gohir.A08G003750 Gossypium hirsutum HOM05D001970 ORTHO05D006581 5.3e-32 141.0 100 72.0
Gorai.004G008400 Gossypium raimondii HOM05D001970 ORTHO05D006581 5.3e-32 141.0 100 73.0
MD03G1136000 Malus domestica HOM05D001970 ORTHO05D006581 5.3e-32 141.0 105 71.4
Ah.01g004530 Amaranthus hybridus HOM05D001970 ORTHO05D006581 7.0e-32 140.6 105 62.9
EL10Ac9g21094 Beta vulgaris HOM05D001970 ORTHO05D006581 7.0e-32 140.6 105 64.8
CiPaw.13G140300 Carya illinoinensis HOM05D001970 ORTHO05D006581 9.1e-32 140.2 103 67.0
FAN25G0696 Fragaria x ananassa HOM05D001970 ORTHO05D006581 9.1e-32 140.2 106 70.8
HanXRQChr11g0346641 Helianthus annuus HOM05D001970 ORTHO05D006581 9.1e-32 140.2 104 69.2
Prupe.6G120300 Prunus persica HOM05D001970 ORTHO05D006581 9.1e-32 140.2 105 70.5
TWI31G0398 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 9.1e-32 140.2 102 68.6
TWI75G0459 Tripterygium wilfordii HOM05D001970 ORTHO05D006581 9.1e-32 140.2 103 68.0
Rhsim01G0207400 Rhododendron simsii HOM05D001970 ORTHO05D006581 1.2e-31 139.8 103 68.0
TAR636G2116 Trochodendron aralioides HOM05D001970 ORTHO05D006581 1.2e-31 139.8 103 68.0
Atru.chr3.3363 Acer truncatum HOM05D001970 ORTHO05D006581 2.0e-31 139.0 101 70.3
Cfa010075 Carpinus fangiana HOM05D001970 ORTHO05D006581 2.0e-31 139.0 103 68.0
Gohir.D08G014100 Gossypium hirsutum HOM05D001970 ORTHO05D006581 2.0e-31 139.0 100 72.0
HanXRQChr01g0016781 Helianthus annuus HOM05D001970 ORTHO05D006581 2.0e-31 139.0 103 68.0
TAR633G0932 Trochodendron aralioides HOM05D001970 ORTHO05D006581 2.0e-31 139.0 103 69.9
MELO3C021447.2 Cucumis melo HOM05D001970 ORTHO05D006581 3.5e-31 138.3 109 66.1
CsaV3_6G014780 Cucumis sativus L. HOM05D001970 ORTHO05D006581 3.5e-31 138.3 109 66.1
FAN16G1916 Fragaria x ananassa HOM05D001970 ORTHO05D006581 3.5e-31 138.3 106 69.8
Aa31LG1G13030 Aethionema arabicum HOM05D001970 ORTHO05D006581 4.5e-31 137.9 105 66.7
arahy.Tifrunner.gnm1.ann1.XX1T89 Arachis hypogaea HOM05D001970 ORTHO05D006581 5.9e-31 137.5 103 69.9
ECA248G3685 Erigeron canadensis HOM05D001970 ORTHO05D006581 7.7e-31 137.1 100 70.0
RcHm_v2.0_Chr5g0055001 Rosa chinensis HOM05D001970 ORTHO05D006581 7.7e-31 137.1 100 72.0
Sp6g22730 Schrenkiella parvula HOM05D001970 ORTHO05D006581 7.7e-31 137.1 101 69.3
FvH4_3g29640 Fragaria vesca HOM05D001970 ORTHO05D006581 1.0e-30 136.7 104 70.2
FAN11G0699 Fragaria x ananassa HOM05D001970 ORTHO05D006581 1.0e-30 136.7 104 70.2
AUR62038317 Chenopodium quinoa HOM05D001970 ORTHO05D006581 1.3e-30 136.3 105 64.8
TPR.G32359 Trifolium pratense HOM05D001970 ORTHO05D006581 1.3e-30 136.3 101 67.3
AUR62023923 Chenopodium quinoa HOM05D001970 ORTHO05D006581 1.7e-30 136.0 105 62.9
Lj3g0026796 Lotus japonicus HOM05D001970 ORTHO05D006581 1.7e-30 136.0 106 66.0
ClCG02G021950 Citrullus lanatus HOM05D001970 ORTHO05D006581 2.9e-30 135.2 109 65.1
Eucgr.J00434 Eucalyptus grandis HOM05D001970 ORTHO05D006581 2.9e-30 135.2 103 65.0
MD11G1158500 Malus domestica HOM05D001970 ORTHO05D006581 3.8e-30 134.8 105 65.7
Hund07680 Selenicereus undatus HOM05D001970 ORTHO05D006581 3.8e-30 134.8 103 64.1
DCAR_012170 Daucus carota HOM05D001970 ORTHO05D006581 5.0e-30 134.4 101 65.3
AT5G22580 Arabidopsis thaliana HOM05D001970 ORTHO05D006581 8.5e-30 133.7 104 66.3
Lalb_Chr24g0395181 Lupinus albus HOM05D001970 ORTHO05D006581 8.5e-30 133.7 103 66.0
AL6G33610 Arabidopsis lyrata HOM05D001970 ORTHO05D006581 1.1e-29 133.3 100 68.0
CARHR190970 Cardamine hirsuta HOM05D001970 ORTHO05D006581 1.1e-29 133.3 100 68.0
Ca_01674_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 1.9e-29 132.5 104 64.4
THA.LOC104810906 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 1.9e-29 132.5 104 64.4
arahy.Tifrunner.gnm1.ann1.4XXP0Y Arachis hypogaea HOM05D001970 ORTHO05D006581 3.2e-29 131.7 107 67.3
BcaC04g19590 Brassica carinata HOM05D001970 ORTHO05D006581 3.2e-29 131.7 101 66.3
C09p53960 Brassica napus HOM05D001970 ORTHO05D006581 3.2e-29 131.7 101 66.3
BolC9t58268H Brassica oleracea HOM05D001970 ORTHO05D006581 3.2e-29 131.7 101 66.3
CANSAT54G1595 Cannabis sativa HOM05D001970 ORTHO05D006581 3.2e-29 131.7 102 63.7
Carub.0006s2032 Capsella rubella HOM05D001970 ORTHO05D006581 3.2e-29 131.7 100 67.0
Phvul.005G126400 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 3.2e-29 131.7 103 64.1
CAN.G644.24 Capsicum annuum HOM05D001970 ORTHO05D006581 4.2e-29 131.3 101 65.3
Thhalv10015069m.g Eutrema salsugineum HOM05D001970 ORTHO05D006581 4.2e-29 131.3 104 64.4
Sabra04G0126300 Salix brachista HOM05D001970 ORTHO05D006581 4.2e-29 131.3 100 65.0
THA.LOC104799538 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 4.2e-29 131.3 99 67.7
BcaB08g36415 Brassica carinata HOM05D001970 ORTHO05D006581 5.5e-29 131.0 100 68.0
A10p18300 Brassica napus HOM05D001970 ORTHO05D006581 9.4e-29 130.2 101 65.3
BraA10t43907Z Brassica rapa HOM05D001970 ORTHO05D006581 9.4e-29 130.2 101 65.3
PGR119G0344 Punica granatum HOM05D001970 ORTHO05D006581 9.4e-29 130.2 106 63.2
BraA02t05667Z Brassica rapa HOM05D001970 ORTHO05D006581 1.6e-28 129.4 104 63.5
Psat5g255760 Pisum sativum HOM05D001970 ORTHO05D006581 1.6e-28 129.4 101 64.4
VMungo1080G0720 Vigna mungo HOM05D001970 ORTHO05D006581 1.6e-28 129.4 103 63.1
Medtr2g084985 Medicago truncatula HOM05D001970 ORTHO05D006581 2.1e-28 129.0 101 64.4
Potri.009G148100 Populus trichocarpa HOM05D001970 ORTHO05D006581 2.7e-28 128.6 106 63.2
Aqoxy4G02879 Aquilegia oxysepala HOM05D001970 ORTHO05D006581 3.6e-28 128.3 103 62.1
Haze_23441 Corylus avellana HOM05D001970 ORTHO05D006581 3.6e-28 128.3 99 64.6
Glyma.13G318600 Glycine max HOM05D001970 ORTHO05D006581 4.7e-28 127.9 103 63.1
C02p11030 Brassica napus HOM05D000051 ORTHO05D000015 6.1e-28 127.5 104 62.5
BolC2t07174H Brassica oleracea HOM05D001970 ORTHO05D006581 6.1e-28 127.5 104 62.5
Hund00766 Selenicereus undatus HOM05D001970 ORTHO05D006581 6.1e-28 127.5 100 61.0
unitig_22.g5664 Utricularia gibba HOM05D001970 ORTHO05D006581 6.1e-28 127.5 100 62.0
Sed0013424 Sechium edule HOM05D001970 ORTHO05D006581 1.0e-27 126.7 105 61.0
Nn2g14038 Nelumbo nucifera HOM05D001970 ORTHO05D006581 1.4e-27 126.3 103 62.1
Glyma.12G182300 Glycine max HOM05D001970 ORTHO05D006581 1.8e-27 125.9 103 62.1
Glyma.11G188300 Glycine max HOM05D001970 ORTHO05D006581 8.8e-27 123.6 102 59.8
Potri.004G187500 Populus trichocarpa HOM05D001970 ORTHO05D006581 1.1e-26 123.2 103 60.2
Phvul.011G091300 Phaseolus vulgaris HOM05D001970 ORTHO05D006581 2.6e-26 122.1 103 58.3
MBI17_g19801_MAGBIO Magnolia biondii HOM05D001970 ORTHO05D006581 9.7e-26 120.2 100 58.0
Manes.11G158200 Manihot esculenta HOM05D001970 ORTHO05D006581 1.7e-25 119.4 105 61.9
vmacro14360 Vaccinium macrocarpon HOM05D001970 ORTHO05D006581 1.7e-25 119.4 84 70.2
PGR102G2963 Punica granatum HOM05D001970 ORTHO05D006581 2.2e-25 119.0 103 57.3
Glyma.12G086100 Glycine max HOM05D001970 ORTHO05D006581 2.8e-25 118.6 102 55.9
Psat7g190320 Pisum sativum HOM05D001970 ORTHO05D006581 2.8e-25 118.6 102 57.8
Lalb_Chr03g0027951 Lupinus albus HOM05D001970 ORTHO05D006581 3.7e-25 118.2 102 55.9
Lalb_Chr19g0136721 Lupinus albus HOM05D001970 ORTHO05D006581 8.2e-25 117.1 105 55.2
Glyma.01G075700 Glycine max HOM05D001970 ORTHO05D006581 1.1e-24 116.7 102 54.9
BNapus_Darmor_BZH_scaffold_38p00560 Brassica napus HOM05D001970 ORTHO05D006581 1.4e-24 116.3 108 58.3
Os11g0150400 Oryza sativa ssp. japonica HOM05D001970 ORTHO05D006581 1.8e-24 115.9 105 55.2
ClCG01G012610 Citrullus lanatus HOM05D001970 ORTHO05D006581 5.3e-24 114.4 104 54.8
THA.LOC104800551 Tarenaya hassleriana HOM05D001970 ORTHO05D006581 9.1e-24 113.6 96 60.4
Ca_19379_v3 Cicer arietinum L. HOM05D001970 ORTHO05D006581 1.2e-23 113.2 102 55.9
CDE04G2325 Ceratophyllum demersum HOM05D001970 ORTHO05D006581 2.7e-23 112.1 100 54.0
TPR.G15579 Trifolium pratense HOM05D001970 ORTHO05D006581 2.7e-23 112.1 102 54.9
MELO3C004785.2 Cucumis melo HOM05D001970 ORTHO05D006581 4.5e-23 111.3 104 53.8
CsaV3_1G014560 Cucumis sativus L. HOM05D001970 ORTHO05D006581 5.9e-23 110.9 104 53.8
Sed0011225 Sechium edule HOM05D001970 ORTHO05D006581 1.3e-22 109.8 105 59.0
Glyma.09G127900 Glycine max HOM05D001970 ORTHO05D006581 2.2e-22 109.0 102 52.9
PSO339G2368 Papaver somniferum HOM05D001970 ORTHO05D006581 2.2e-22 109.0 103 51.5
Sed0015386 Sechium edule HOM05D001970 ORTHO05D006581 2.9e-22 108.6 105 49.5
Glyma.13G008100 Glycine max HOM05D001970 ORTHO05D006581 3.8e-22 108.2 102 52.0
PSO384G2868 Papaver somniferum HOM05D001970 ORTHO05D006581 3.8e-22 108.2 103 51.5
Rhsim12G0094000 Rhododendron simsii HOM05D001970 ORTHO05D006581 1.1e-21 106.7 81 64.2
Peaxi162Scf37203g00001 Petunia axillaris HOM05D001970 ORTHO05D006581 9.4e-21 103.6 68 69.1
PGSC0003DMG402026539 Solanum tuberosum HOM05D001970 ORTHO05D006581 1.2e-20 103.2 97 55.7
arahy.Tifrunner.gnm1.ann1.7YIN5C Arachis hypogaea HOM05D001970 ORTHO05D006581 1.6e-20 102.8 104 51.0
arahy.Tifrunner.gnm1.ann1.86JG4M Arachis hypogaea HOM05D001970 ORTHO05D006581 1.6e-20 102.8 104 51.0
Manes.04G007800 Manihot esculenta HOM05D001970 ORTHO05D006581 2.7e-20 102.1 105 52.4
ATR0820G029 Amborella trichopoda HOM05D001970 ORTHO05D006581 2.3e-19 99.0 101 43.6
Lsat_1_v5_gn_4_46140 Lactuca sativa HOM05D001970 ORTHO05D004069 2.3e-11 72.4 103 40.8
BcaB04g20854 Brassica carinata HOM05D001970 ORTHO05D004069 8.8e-11 70.5 100 41.0
A01p37110 Brassica napus HOM05D001970 ORTHO05D004069 8.8e-11 70.5 100 41.0
BraA01t03770Z Brassica rapa HOM05D001970 ORTHO05D004069 8.8e-11 70.5 100 41.0
BcaC09g48679 Brassica carinata HOM05D001970 ORTHO05D004069 1.2e-10 70.1 100 41.0
HanXRQChr16g0519591 Helianthus annuus HOM05D001970 ORTHO05D004069 1.5e-10 69.7 102 39.2
Potri.010G150900 Populus trichocarpa HOM05D001970 ORTHO05D004069 1.5e-10 69.7 101 41.6
Sc19g0000220 Simmondsia chinensis HOM05D001970 ORTHO05D004069 1.5e-10 69.7 100 41.0
CSS0044499 Camellia sinensis var. sinensis HOM05D001970 ORTHO05D004069 3.4e-10 68.6 95 38.9
Dinv29434 Davidia involucrata HOM05D001970 ORTHO05D006581 3.4e-10 68.6 101 41.6
PGR031G3476 Punica granatum HOM05D001970 ORTHO05D004069 3.4e-10 68.6 101 35.6
AL3G30240 Arabidopsis lyrata HOM05D001970 ORTHO05D004069 4.4e-10 68.2 100 39.0
ATR0757G143 Amborella trichopoda HOM05D001970 ORTHO05D004069 5.7e-10 67.8 104 34.6
CANSAT78G2049 Cannabis sativa HOM05D001970 ORTHO05D004069 5.7e-10 67.8 103 39.8
Prupe.1G111200 Prunus persica HOM05D001970 ORTHO05D004069 5.7e-10 67.8 101 38.6
Rhsim04G0243300 Rhododendron simsii HOM05D001970 ORTHO05D004069 5.7e-10 67.8 95 38.9
Aqoxy5G02736 Aquilegia oxysepala HOM05D001970 ORTHO05D004069 1.3e-09 66.6 95 37.9
MELO3C006735.2 Cucumis melo HOM05D001970 ORTHO05D004069 1.3e-09 66.6 95 37.9
Glyma.04G082200 Glycine max HOM05D001970 ORTHO05D004069 1.3e-09 66.6 101 37.6
Phvul.009G108000 Phaseolus vulgaris HOM05D001970 ORTHO05D004069 1.7e-09 66.2 95 38.9
Atru.chr4.3100 Acer truncatum HOM05D001970 ORTHO05D004069 2.2e-09 65.9 101 37.6
Migut.N00022 Erythranthe guttata HOM05D001970 ORTHO05D004069 2.2e-09 65.9 103 35.0
Glyma.06G083900 Glycine max HOM05D001970 ORTHO05D004069 2.2e-09 65.9 101 36.6
ClCG05G006740 Citrullus lanatus HOM05D001970 ORTHO05D004069 3.7e-09 65.1 95 36.8
QL06p013371 Quercus lobata HOM05D001970 ORTHO05D004069 3.7e-09 65.1 100 38.0
CsaV3_3G015370 Cucumis sativus L. HOM05D001970 ORTHO05D004069 4.9e-09 64.7 95 37.9
ATR1096G001 Amborella trichopoda HOM05D001970 ORTHO05D006581 6.3e-09 64.3 57 42.1
AUR62005911 Chenopodium quinoa HOM05D001970 ORTHO05D004069 8.3e-09 63.9 101 33.7
HPP92_015244 Vanilla planifolia HOM05D001970 ORTHO05D004069 8.3e-09 63.9 94 37.2
BraA01t03767Z Brassica rapa HOM05D001970 ORTHO05D004069 1.4e-08 63.2 93 40.9
RcHm_v2.0_Chr4g0426271 Rosa chinensis HOM05D001970 ORTHO05D004069 3.1e-08 62.0 100 38.0
VMungo1309G0293 Vigna mungo HOM05D001970 ORTHO05D004069 3.1e-08 62.0 121 34.7
TPR.G12625 Trifolium pratense HOM05D001970 ORTHO05D004069 4.1e-08 61.6 95 37.9
Mapoly0058s0001 Marchantia polymorpha HOM05D001970 ORTHO05D004069 7.0e-08 60.8 107 33.6
FAN07G1061 Fragaria x ananassa HOM05D001970 ORTHO05D004069 9.2e-08 60.5 101 35.6
MD16G1147500 Malus domestica HOM05D001970 ORTHO05D004069 1.2e-07 60.1 121 31.4
Manes.03G208900 Manihot esculenta HOM05D001970 ORTHO05D004069 2.0e-07 59.3 100 38.0
Migut.N00021 Erythranthe guttata HOM05D001970 ORTHO05D004069 3.5e-07 58.5 105 32.4
PSO729G0118 Papaver somniferum HOM05D001970 ORTHO05D004069 7.7e-07 57.4 105 31.4
HPP92_015245 Vanilla planifolia HOM05D001970 ORTHO05D004069 8.6e-06 53.9 103 34.0


User provided reference genes

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