Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.8e-139 499.2 249 100.0
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 7.1e-83 311.2 182 86.3
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 7.1e-83 311.2 182 86.3
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 1.6e-82 310.1 274 63.5
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.7e-73 280.0 174 84.5
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 2.3e-73 279.6 245 63.7
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.5e-64 250.4 155 82.6
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 5.3e-62 241.9 193 70.5
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 1.9e-59 233.4 141 84.4
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 4.2e-59 232.3 142 83.1
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 1.3e-57 227.3 162 72.8
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.3e-57 226.5 138 82.6
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.0e-57 226.1 141 81.6
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 3.0e-57 226.1 141 81.6
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 3.0e-57 226.1 141 81.6
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 3.9e-57 225.7 138 83.3
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 5.1e-57 225.3 185 67.0
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 5.1e-57 225.3 185 67.0
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 5.1e-57 225.3 132 86.4
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 2.5e-56 223.0 137 83.2
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 2.5e-56 223.0 137 83.2
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 3.3e-56 222.6 138 81.9
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 3.3e-56 222.6 138 82.6
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 4.3e-56 222.2 138 81.9
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 7.4e-56 221.5 141 80.9
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 7.4e-56 221.5 141 80.9
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 1.6e-55 220.3 132 84.8
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 1.6e-55 220.3 138 80.4
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 2.8e-55 219.5 132 83.3
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 4.8e-55 218.8 132 83.3
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 4.8e-55 218.8 132 83.3
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 9.0e-54 214.5 138 79.0
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 9.0e-54 214.5 132 82.6
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 9.0e-54 214.5 132 82.6
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 1.5e-53 213.8 132 83.3
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 8.4e-52 208.0 129 82.9
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 4.6e-50 202.2 132 78.8
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 3.9e-49 199.1 131 77.9
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 3.3e-48 196.1 127 79.5
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 7.4e-48 194.9 132 75.0
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.6e-47 193.7 141 70.9
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 1.6e-47 193.7 141 70.9
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 1.8e-46 190.3 200 57.0
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 1.3e-41 174.1 123 73.2
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 5.1e-41 172.2 109 80.7
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 1.9e-40 170.2 112 77.7
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 4.3e-40 169.1 101 86.1
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 5.7e-40 168.7 143 64.3
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 1.4e-38 164.1 95 88.4
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 4.8e-31 139.0 81 86.4
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 8.2e-31 138.3 135 58.5
Nitab4.5_0000593g0220 Nicotiana tabacum HOM05D003666 ORTHO05D004770 5.3e-30 135.6 89 74.2
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 6.9e-30 135.2 92 78.3
TPR.G18511 Trifolium pratense HOM05D003666 ORTHO05D004770 6.9e-30 135.2 96 71.9
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 3.4e-29 132.9 81 84.0
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 1.0e-28 131.3 98 71.4
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 3.8e-28 129.4 81 81.5
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.2e-26 124.4 133 57.1
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 1.1e-24 117.9 137 43.8
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 1.4e-22 110.9 72 77.8
BolC4t23491H Brassica oleracea HOM05D003666 ORTHO05D004770 3.1e-22 109.8 73 74.0
CDE02G4352 Ceratophyllum demersum HOM05D011521 ORTHO05D043913 5.3e-22 109.0 72 73.6
SalBow1G6983 Salvia bowleyana HOM05D003666 ORTHO05D004770 5.9e-21 105.5 332 30.4
Peaxi162Scf00147g00311 Petunia axillaris HOM05D003666 ORTHO05D004770 2.9e-20 103.2 78 67.9
Haze_27149 Corylus avellana HOM05D003666 ORTHO05D004770 8.8e-17 91.7 139 38.1
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 5.3e-14 82.4 142 42.3
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 5.9e-13 79.0 65 64.6
Oeu022812.1 Olea europaea HOM05D003666 ORTHO05D004770 1.0e-12 78.2 71 63.4
MELO3C030345.2 Cucumis melo HOM05D003666 ORTHO05D004770 1.3e-12 77.8 55 74.5
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-11 74.7 50 74.0
Lalb_Chr00c54g0413571 Lupinus albus HOM05D003666 ORTHO05D004770 7.2e-11 72.0 48 70.8
Sopen02g001520 Solanum pennellii HOM05D000002 ORTHO05D000001 3.6e-10 69.7 38 86.8
SEGI_13011 Sequoiadendron giganteum HOM05D001200 ORTHO05D002731 2.3e-09 67.0 112 34.8
Solyc10g045765.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.7e-07 60.8 65 49.2
SEGI_03857 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 2.2e-07 60.5 59 55.9
TAR022G0002 Trochodendron aralioides HOM05D003666 ORTHO05D004770 3.1e-06 56.6 77 41.6
Lj2P1238T97 Lonicera japonica HOM05D001200 ORTHO05D002731 5.3e-06 55.8 147 28.6
SHI01159 Sapria himalayana HOM05D003666 ORTHO05D004770 5.3e-06 55.8 54 53.7
Nn064s42212 Nelumbo nucifera HOM05D001200 ORTHO05D002731 9.1e-06 55.1 147 27.9


User provided reference genes

Program Settings