Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006071g0080 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.0e-95 352.4 176 100.0
Solyc03g121340.1 Solanum lycopersicum HOM05D008135 ORTHO05D010260 3.6e-33 145.6 84 88.1
Peaxi162Scf00038g01219 Petunia axillaris HOM05D008135 ORTHO05D010260 1.7e-30 136.7 84 82.1
Sopen03g040150 Solanum pennellii HOM05D008135 ORTHO05D010260 2.4e-24 116.3 63 92.1
Nitab4.5_0004848g0120 Nicotiana tabacum HOM05D008135 ORTHO05D010260 2.4e-21 106.3 55 92.7
Actinidia32128 Actinidia chinensis HOM05D008135 ORTHO05D010260 1.6e-20 103.6 61 85.2
CSS0040576 Camellia sinensis var. sinensis HOM05D008135 ORTHO05D010260 2.7e-20 102.8 60 83.3
Oeu052813.1 Olea europaea HOM05D008135 ORTHO05D010260 1.5e-18 97.1 56 82.1
vmacro18825 Vaccinium macrocarpon HOM05D008135 ORTHO05D010260 1.5e-18 97.1 80 62.5
Dinv30405 Davidia involucrata HOM05D008135 ORTHO05D010260 2.5e-18 96.3 78 64.1
Rhsim08G0230800 Rhododendron simsii HOM05D008135 ORTHO05D010260 2.5e-18 96.3 56 82.1
Manes.04G137100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.3e-17 94.0 79 63.3
MSTRG.11003 Avicennia marina HOM05D008135 ORTHO05D010260 1.8e-16 90.1 67 65.7
ECA232G1244 Erigeron canadensis HOM05D008135 ORTHO05D010260 4.0e-16 89.0 55 76.4
DCAR_026371 Daucus carota HOM05D008135 ORTHO05D010260 5.3e-16 88.6 80 55.0
Migut.I00998 Erythranthe guttata HOM05D008135 ORTHO05D010260 6.9e-16 88.2 51 84.3
Manes.11G029100 Manihot esculenta HOM05D008135 ORTHO05D010260 1.5e-15 87.0 63 71.4
Gohir.A05G133400 Gossypium hirsutum HOM05D008135 ORTHO05D010260 2.0e-15 86.7 63 65.1
CiPaw.01G227600 Carya illinoinensis HOM05D008135 ORTHO05D010260 2.6e-15 86.3 72 62.5
Gohir.D05G135300 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.4e-15 85.9 63 65.1
Gorai.009G139100 Gossypium raimondii HOM05D008135 ORTHO05D010260 3.4e-15 85.9 63 65.1
Cfa003610 Carpinus fangiana HOM05D008135 ORTHO05D010260 1.3e-14 84.0 76 59.2
Potri.001G194100 Populus trichocarpa HOM05D008135 ORTHO05D010260 2.2e-14 83.2 63 66.7
Sabra01G0135100 Salix brachista HOM05D008135 ORTHO05D010260 2.2e-14 83.2 65 66.2
Duzib235G1506 Durio zibethinus HOM05D008135 ORTHO05D010260 2.9e-14 82.8 56 73.2
Thecc.06G106900 Theobroma cacao HOM05D008135 ORTHO05D010260 2.9e-14 82.8 66 65.2
Actinidia21739 Actinidia chinensis HOM05D008135 ORTHO05D010260 3.8e-14 82.4 78 60.3
RcHm_v2.0_Chr2g0142321 Rosa chinensis HOM05D008135 ORTHO05D010260 3.8e-14 82.4 63 63.5
unitig_88.g27599 Utricularia gibba HOM05D008135 ORTHO05D010260 6.4e-14 81.6 84 52.4
Prupe.3G053100 Prunus persica HOM05D008135 ORTHO05D010260 1.9e-13 80.1 61 65.6
Cpa.g.sc131.24 Carica papaya HOM05D008135 ORTHO05D010260 5.4e-13 78.6 61 60.7
DCAR_007606 Daucus carota HOM05D008135 ORTHO05D010260 9.3e-13 77.8 51 70.6
COL.COLO4_30598 Corchorus olitorius HOM05D008135 ORTHO05D010260 1.2e-12 77.4 56 67.9
QL05p015762 Quercus lobata HOM05D008135 ORTHO05D010260 1.6e-12 77.0 86 45.3
Glyma.07G012900 Glycine max HOM05D008135 ORTHO05D010260 6.0e-12 75.1 77 51.9
Eucgr.J02889 Eucalyptus grandis HOM05D008135 ORTHO05D010260 7.9e-12 74.7 94 51.1
QL05p015599 Quercus lobata HOM05D008135 ORTHO05D010260 7.9e-12 74.7 50 70.0
FAN05G3342 Fragaria x ananassa HOM05D008135 ORTHO05D010260 1.0e-11 74.3 63 61.9
FvH4_6g32890 Fragaria vesca HOM05D008135 ORTHO05D010260 1.3e-11 73.9 63 61.9
Gohir.A10G062350 Gossypium hirsutum HOM05D008135 ORTHO05D010260 1.8e-11 73.6 81 49.4
arahy.Tifrunner.gnm1.ann1.4P5WGY Arachis hypogaea HOM05D008135 ORTHO05D010260 3.0e-11 72.8 78 55.1
Gohir.D10G064050 Gossypium hirsutum HOM05D008135 ORTHO05D010260 3.9e-11 72.4 72 55.6
arahy.Tifrunner.gnm1.ann1.7STU2J Arachis hypogaea HOM05D008135 ORTHO05D010260 5.1e-11 72.0 58 67.2
FAN02G1144 Fragaria x ananassa HOM05D008135 ORTHO05D010260 5.1e-11 72.0 63 60.3
Glyma.08G196600 Glycine max HOM05D008135 ORTHO05D010260 5.1e-11 72.0 57 61.4
Medtr8g015560 Medicago truncatula HOM05D008135 ORTHO05D010260 8.7e-11 71.2 60 63.3
Phvul.010G142400 Phaseolus vulgaris HOM05D008135 ORTHO05D010260 1.1e-10 70.9 60 56.7
CsaV3_7G034940 Cucumis sativus L. HOM05D008135 ORTHO05D010260 1.5e-10 70.5 68 52.9
Gorai.011G068000 Gossypium raimondii HOM05D008135 ORTHO05D010260 1.5e-10 70.5 72 54.2
TAR383G0415 Trochodendron aralioides HOM05D008135 ORTHO05D010260 1.9e-10 70.1 57 61.4
QL05p015735 Quercus lobata HOM05D008135 ORTHO05D010260 2.5e-10 69.7 50 66.0
MELO3C024405.2 Cucumis melo HOM05D008135 ORTHO05D010260 3.3e-10 69.3 68 51.5
ClCG09G000520 Citrullus lanatus HOM05D008135 ORTHO05D010260 1.6e-09 67.0 66 51.5
Lj3g0018742 Lotus japonicus HOM05D008135 ORTHO05D010260 1.6e-09 67.0 57 63.2
TAR624G1313 Trochodendron aralioides HOM05D008135 ORTHO05D010260 2.8e-09 66.2 75 54.7
MBI01_g16574_MAGBIO Magnolia biondii HOM05D008135 ORTHO05D010260 4.8e-09 65.5 62 54.8
Lalb_Chr25g0280561 Lupinus albus HOM05D008135 ORTHO05D010260 8.1e-09 64.7 80 48.8
Psat4g194640 Pisum sativum HOM05D008135 ORTHO05D010260 3.1e-08 62.8 78 47.4
Atru.chr1.3625 Acer truncatum HOM05D008135 ORTHO05D010260 6.9e-08 61.6 82 47.6
Os01g0558700 Oryza sativa ssp. japonica HOM05D008135 ORTHO05D010260 6.9e-08 61.6 65 55.4
Sed0004354 Sechium edule HOM05D008135 ORTHO05D010260 9.0e-08 61.2 74 48.6
THA.LOC109116552 Tarenaya hassleriana HOM05D008135 ORTHO05D010260 9.0e-08 61.2 54 55.6
Aqoxy2G03851 Aquilegia oxysepala HOM05D008135 ORTHO05D010260 2.6e-07 59.7 64 53.1
HPP92_005009 Vanilla planifolia HOM05D037031 ORTHO05D010260 4.9e-06 55.5 58 44.8
Thhalv10021871m.g Eutrema salsugineum HOM05D011376 ORTHO05D013452 6.4e-06 55.1 67 49.3
Sc12g0009960 Simmondsia chinensis HOM05D008135 ORTHO05D010260 6.4e-06 55.1 55 50.9


User provided reference genes

Program Settings