Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 3.7e-171 604.7 302 100.0
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 1.1e-159 566.6 320 90.3
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 3.7e-142 508.4 277 90.6
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 1.0e-139 500.4 277 88.4
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.3e-139 500.0 277 88.4
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 4.9e-139 498.0 277 87.7
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 8.4e-139 497.3 277 88.1
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 7.9e-129 464.2 277 79.8
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.5e-127 459.9 277 79.4
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 2.8e-126 455.7 277 78.0
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 1.1e-125 453.8 277 76.5
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.3e-125 451.4 277 76.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 2.6e-124 449.1 277 77.6
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.6e-124 449.1 312 70.5
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 5.9e-124 448.0 277 76.5
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 5.9e-124 448.0 277 76.5
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 1.0e-123 447.2 277 75.8
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 8.5e-123 444.1 281 75.4
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.4e-122 443.4 277 76.5
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 3.2e-122 442.2 277 75.5
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 5.5e-122 441.4 277 75.1
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 9.4e-122 440.7 277 75.1
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 3.6e-121 438.7 277 75.1
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 7.9e-121 437.6 277 74.4
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 7.9e-121 437.6 277 75.1
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 1.4e-120 436.8 277 74.4
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.8e-120 436.4 277 75.1
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 3.9e-120 435.3 276 75.0
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 3.9e-120 435.3 277 75.1
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.7e-120 434.5 277 74.4
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 6.7e-120 434.5 277 73.6
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 8.8e-120 434.1 277 73.6
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 2.0e-119 433.0 277 74.0
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 3.3e-119 432.2 277 74.0
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 3.3e-119 432.2 277 74.4
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 3.3e-119 432.2 277 73.3
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 3.3e-119 432.2 277 74.4
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 7.4e-119 431.0 277 73.6
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 9.7e-119 430.6 277 74.4
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.7e-118 429.9 277 74.4
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 2.2e-118 429.5 277 73.6
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 2.2e-118 429.5 277 74.4
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 2.8e-118 429.1 277 72.6
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 3.7e-118 428.7 277 73.6
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 6.9e-117 424.5 304 68.4
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 6.9e-117 424.5 277 73.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 6.9e-117 424.5 341 63.0
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 9.1e-117 424.1 277 73.3
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 2.0e-116 422.9 277 72.9
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 2.0e-116 422.9 277 72.6
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 2.0e-116 422.9 277 72.9
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 2.6e-116 422.5 277 71.8
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 5.9e-116 421.4 304 68.1
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 5.9e-116 421.4 277 70.8
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 5.9e-116 421.4 277 71.8
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.9e-116 421.4 277 72.6
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 7.7e-116 421.0 276 72.8
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.7e-115 419.9 277 72.2
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.9e-115 419.1 304 67.8
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.9e-115 419.1 277 71.1
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 5.0e-115 418.3 293 70.6
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 1.1e-114 417.2 283 70.7
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 1.9e-114 416.4 304 67.4
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 1.9e-114 416.4 274 72.6
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 3.2e-114 415.6 304 66.8
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 3.2e-114 415.6 277 70.4
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 1.6e-113 413.3 304 67.1
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 2.1e-113 412.9 277 70.4
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 4.7e-113 411.8 283 68.2
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 6.1e-113 411.4 312 66.3
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 6.1e-113 411.4 277 71.5
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 1.8e-112 409.8 277 70.4
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 5.1e-112 408.3 258 74.0
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 7.4e-111 404.4 361 58.4
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 7.4e-111 404.4 283 68.2
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 7.4e-111 404.4 340 60.3
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 2.2e-110 402.9 277 67.1
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 8.5e-107 391.0 277 65.3
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 2.1e-105 386.3 277 68.2
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 8.8e-104 380.9 277 70.0
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 5.0e-99 365.2 273 62.6
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 2.5e-98 362.8 277 61.0
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 8.8e-96 354.4 277 59.9
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 4.8e-94 348.6 297 55.6
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 3.6e-89 332.4 271 61.3
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 6.8e-88 328.2 240 67.9
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 2.0e-87 326.6 206 77.7
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.3e-78 297.4 212 67.0
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 7.3e-74 281.6 239 58.6
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 1.5e-71 273.9 190 67.9
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 1.7e-70 270.4 273 50.2
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 2.2e-54 216.9 166 68.7
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 2.4e-53 213.4 127 75.6
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 4.6e-52 209.1 260 43.1
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 6.6e-51 205.3 253 43.1
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 7.6e-47 191.8 549 27.5
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.2e-45 186.4 125 73.6
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 3.2e-21 106.7 96 49.0
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 9.3e-21 105.1 71 64.8
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 2.7e-20 103.6 88 59.1
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 2.3e-19 100.5 223 30.9
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.2e-15 88.2 77 54.5
COL.COLO4_34115 Corchorus olitorius HOM05D007381 ORTHO05D159467 5.0e-06 56.2 41 70.7


User provided reference genes

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