Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006066g0020 Nicotiana tabacum HOM05D007159 ORTHO05D009068 7.1e-107 390.6 194 100.0
Nitab4.5_0000256g0440 Nicotiana tabacum HOM05D007159 ORTHO05D009068 9.7e-80 300.4 174 89.7
PGSC0003DMG402002094 Solanum tuberosum HOM05D007159 ORTHO05D009068 1.6e-61 240.0 133 89.5
Solyc06g061130.4 Solanum lycopersicum HOM05D007159 ORTHO05D009068 1.7e-60 236.5 133 88.7
Sopen06g021330 Solanum pennellii HOM05D007159 ORTHO05D009068 1.7e-60 236.5 133 88.7
arahy.Tifrunner.gnm1.ann1.XLH660 Arachis hypogaea HOM05D007159 ORTHO05D009068 9.8e-56 220.7 136 76.5
CiPaw.13G018000 Carya illinoinensis HOM05D007159 ORTHO05D009068 3.7e-55 218.8 139 75.5
COL.COLO4_32863 Corchorus olitorius HOM05D007159 ORTHO05D009068 7.0e-54 214.5 127 81.1
QL04p022349 Quercus lobata HOM05D007159 ORTHO05D009068 7.0e-54 214.5 133 76.7
Duzib128G1689 Durio zibethinus HOM05D007159 ORTHO05D009068 2.7e-53 212.6 132 78.0
Manes.11G009800 Manihot esculenta HOM05D007159 ORTHO05D009068 2.7e-53 212.6 135 75.6
Thecc.10G133500 Theobroma cacao HOM05D007159 ORTHO05D009068 4.5e-53 211.8 127 79.5
Ciclev10002366m.g Citrus clementina HOM05D007159 ORTHO05D009068 5.9e-53 211.5 133 75.9
SalBow5G2583 Salvia bowleyana HOM05D007159 ORTHO05D009068 5.9e-53 211.5 129 76.0
Lj3g0023531 Lotus japonicus HOM05D007159 ORTHO05D009068 1.7e-52 209.9 133 73.7
Cc00_g21840 Coffea canephora HOM05D007159 ORTHO05D009068 2.3e-52 209.5 130 77.7
Medtr3g011770 Medicago truncatula HOM05D007159 ORTHO05D009068 3.8e-52 208.8 133 72.2
GSVIVG01004028001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.6e-52 207.6 127 76.4
GSVIVG01012409001 Vitis vinifera HOM05D007159 ORTHO05D009068 8.6e-52 207.6 127 76.4
MD02G1270600 Malus domestica HOM05D007159 ORTHO05D009068 1.5e-51 206.8 133 73.7
Phvul.005G013300 Phaseolus vulgaris HOM05D007159 ORTHO05D009068 1.5e-51 206.8 133 72.2
VMungo1080G1031 Vigna mungo HOM05D007159 ORTHO05D009068 1.9e-51 206.5 133 71.4
GSVIVG01012445001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.3e-51 205.7 127 75.6
Glyma.04G126100 Glycine max HOM05D007159 ORTHO05D009068 4.3e-51 205.3 133 71.4
Lalb_Chr18g0048161 Lupinus albus HOM05D007159 ORTHO05D009068 4.3e-51 205.3 133 72.9
Migut.B01174 Erythranthe guttata HOM05D007159 ORTHO05D009068 5.6e-51 204.9 115 83.5
FvH4_6g11251 Fragaria vesca HOM05D007159 ORTHO05D009068 5.6e-51 204.9 129 75.2
FAN02G0787 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.6e-51 204.9 129 74.4
FAN14G5227 Fragaria x ananassa HOM05D007159 ORTHO05D009068 5.6e-51 204.9 129 75.2
RcHm_v2.0_Chr3g0462781 Rosa chinensis HOM05D007159 ORTHO05D009068 7.3e-51 204.5 129 75.2
Eucgr.G03186 Eucalyptus grandis HOM05D007159 ORTHO05D009068 9.5e-51 204.1 120 80.0
MSTRG.20491 Avicennia marina HOM05D007159 ORTHO05D009068 1.2e-50 203.8 129 73.6
Gohir.A10G191800 Gossypium hirsutum HOM05D007159 ORTHO05D009068 1.6e-50 203.4 133 76.7
GSVIVG01004020001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.6e-50 203.4 127 74.8
TWI63G1065 Tripterygium wilfordii HOM05D007159 ORTHO05D009068 2.1e-50 203.0 133 71.4
FAN14G2984 Fragaria x ananassa HOM05D007159 ORTHO05D009068 2.8e-50 202.6 129 74.4
Potri.003G190101 Populus trichocarpa HOM05D007159 ORTHO05D009068 4.7e-50 201.8 133 73.7
SGA_v2.0_scaffold141G35535 Striga asiatica HOM05D007159 ORTHO05D009068 8.0e-50 201.1 115 80.9
THA.LOC104824199 Tarenaya hassleriana HOM05D007159 ORTHO05D009068 4.0e-49 198.7 130 72.3
TPR.G30403 Trifolium pratense HOM05D007159 ORTHO05D009068 6.8e-49 198.0 133 69.2
PGR031G3393 Punica granatum HOM05D007159 ORTHO05D009068 8.9e-49 197.6 133 72.2
Gorai.011G223700 Gossypium raimondii HOM05D007159 ORTHO05D009068 2.0e-48 196.4 133 74.4
Gohir.D10G199566 Gossypium hirsutum HOM05D007159 ORTHO05D009068 2.6e-48 196.1 134 73.1
ATR0598G156 Amborella trichopoda HOM05D007159 ORTHO05D009068 3.4e-48 195.7 128 71.9
Hund06845 Selenicereus undatus HOM05D007159 ORTHO05D009068 7.5e-48 194.5 133 67.7
Psat5g224840 Pisum sativum HOM05D007159 ORTHO05D009068 2.2e-47 193.0 122 73.0
AUR62035525 Chenopodium quinoa HOM05D007159 ORTHO05D009068 1.1e-46 190.7 133 66.9
Rhsim08G0052600 Rhododendron simsii HOM05D007159 ORTHO05D009068 1.4e-46 190.3 130 70.8
Nn2g14588 Nelumbo nucifera HOM05D007159 ORTHO05D009068 1.8e-46 189.9 133 67.7
PSO339G3610 Papaver somniferum HOM05D007159 ORTHO05D009068 2.4e-46 189.5 130 66.9
TAR623G0509 Trochodendron aralioides HOM05D007159 ORTHO05D009068 4.1e-46 188.7 164 59.1
Carub.0004s2069 Capsella rubella HOM05D007159 ORTHO05D009068 1.2e-45 187.2 130 66.9
Sp4g21050 Schrenkiella parvula HOM05D007159 ORTHO05D009068 1.2e-45 187.2 130 66.9
Aqoxy1G00016 Aquilegia oxysepala HOM05D007159 ORTHO05D009068 3.5e-45 185.7 117 73.5
AT2G38695 Arabidopsis thaliana HOM05D007159 ORTHO05D009068 3.5e-45 185.7 125 68.8
ClCG11G012910 Citrullus lanatus HOM05D007159 ORTHO05D009068 4.6e-45 185.3 114 76.3
Zm00001eb314250 Zea mays HOM05D007159 ORTHO05D009068 4.6e-45 185.3 122 70.5
BcaNung04831 Brassica carinata HOM05D007159 ORTHO05D009068 7.8e-45 184.5 134 65.7
BraA03t11390Z Brassica rapa HOM05D007159 ORTHO05D009068 7.8e-45 184.5 132 66.7
A03p21540 Brassica napus HOM05D007159 ORTHO05D009068 1.0e-44 184.1 132 65.9
CARHR133370 Cardamine hirsuta HOM05D007159 ORTHO05D009068 1.3e-44 183.7 130 65.4
C03p25530 Brassica napus HOM05D007159 ORTHO05D009068 1.7e-44 183.3 132 65.9
BolC3t14940H Brassica oleracea HOM05D007159 ORTHO05D009068 1.7e-44 183.3 132 65.9
Actinidia35758 Actinidia chinensis HOM05D007159 ORTHO05D009068 3.9e-44 182.2 115 73.0
AL4G35990 Arabidopsis lyrata HOM05D007159 ORTHO05D009068 3.9e-44 182.2 125 68.0
Thhalv10017229m.g Eutrema salsugineum HOM05D007159 ORTHO05D009068 1.9e-43 179.9 130 64.6
CsaV3_5G029340 Cucumis sativus L. HOM05D007159 ORTHO05D009068 3.3e-43 179.1 134 66.4
Aa31sc689G20 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.1e-42 176.4 130 64.6
Lsat_1_v5_gn_7_31321 Lactuca sativa HOM05D007159 ORTHO05D009068 4.7e-42 175.3 115 69.6
Dinv23933 Davidia involucrata HOM05D007159 ORTHO05D009068 2.3e-41 172.9 103 79.6
Aa31sc26G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 4.0e-41 172.2 146 58.9
HPP92_004369 Vanilla planifolia HOM05D007159 ORTHO05D009068 6.8e-41 171.4 119 67.2
EL10Ac4g08838 Beta vulgaris HOM05D007159 ORTHO05D009068 3.4e-40 169.1 149 59.7
SEGI_36712 Sequoiadendron giganteum HOM05D007159 ORTHO05D009068 4.4e-40 168.7 132 60.6
ECA236G3649 Erigeron canadensis HOM05D007159 ORTHO05D009068 4.9e-39 165.2 116 65.5
arahy.Tifrunner.gnm1.ann1.T46YUH Arachis hypogaea HOM05D007159 ORTHO05D009068 3.2e-38 162.5 137 60.6
HanXRQChr15g0480981 Helianthus annuus HOM05D007159 ORTHO05D009068 5.4e-38 161.8 114 66.7
Peaxi162Scf00615g00514 Petunia axillaris HOM05D007159 ORTHO05D009068 1.6e-37 160.2 83 92.8
Mapoly0102s0032 Marchantia polymorpha HOM05D007159 ORTHO05D009068 1.7e-36 156.8 134 60.4
AagrBONN_evm.TU.Sc2ySwM_344.1718 Anthoceros agrestis HOM05D007159 ORTHO05D009068 3.9e-36 155.6 126 60.3
Sc09g0004690 Simmondsia chinensis HOM05D007159 ORTHO05D009068 4.3e-35 152.1 93 80.6
DCAR_001925 Daucus carota HOM05D007159 ORTHO05D009068 1.2e-34 150.6 98 71.4
SMO137G0134 Selaginella moellendorffii HOM05D007159 ORTHO05D009068 6.2e-34 148.3 113 60.2
Actinidia39400 Actinidia chinensis HOM05D007159 ORTHO05D009068 1.5e-32 143.7 97 71.1
Prupe.2G049700 Prunus persica HOM05D007159 ORTHO05D009068 4.9e-31 138.7 90 71.1
Ah.06g191300 Amaranthus hybridus HOM05D007159 ORTHO05D009068 1.4e-30 137.1 136 52.2
CBR_g8263 Chara braunii HOM05D007159 ORTHO05D009068 3.2e-30 136.0 128 54.7
FAN05G1155 Fragaria x ananassa HOM05D007159 ORTHO05D009068 6.0e-29 131.7 129 55.8
GSVIVG01012423001 Vitis vinifera HOM05D007159 ORTHO05D009068 1.7e-28 130.2 74 83.8
GSVIVG01012347001 Vitis vinifera HOM05D007159 ORTHO05D009068 3.9e-28 129.0 85 74.1
AUR62041642 Chenopodium quinoa HOM05D007159 ORTHO05D009068 6.6e-28 128.3 115 55.7
MELO3C034053.2 Cucumis melo HOM05D007159 ORTHO05D009068 1.5e-27 127.1 92 67.4
Oeu058665.1 Olea europaea HOM05D007159 ORTHO05D009068 1.5e-27 127.1 71 83.1
Sed0014969 Sechium edule HOM05D007159 ORTHO05D009068 1.5e-27 127.1 101 62.4
Aa31sc19G60 Aethionema arabicum HOM05D007159 ORTHO05D009068 2.3e-25 119.8 74 75.7
GSVIVG01012437001 Vitis vinifera HOM05D007159 ORTHO05D009068 2.2e-23 113.2 127 48.0
unitig_749.g13795 Utricularia gibba HOM05D007159 ORTHO05D009068 4.9e-23 112.1 74 74.3
FAN09G0838 Fragaria x ananassa HOM05D007159 ORTHO05D009068 1.1e-19 100.9 130 43.1
QL04p022306 Quercus lobata HOM05D007159 ORTHO05D009068 9.6e-19 97.8 84 59.5
Atru.chr12.1193 Acer truncatum HOM05D007159 ORTHO05D009068 2.4e-17 93.2 49 91.8
PRCOL_00002415 Prasinoderma coloniale HOM05D007159 ORTHO05D009068 3.8e-15 85.9 120 40.0
Sed0016161 Sechium edule HOM05D007159 ORTHO05D009068 6.4e-15 85.1 61 65.6
Glyma.06G312500 Glycine max HOM05D007159 ORTHO05D009068 1.4e-14 84.0 64 64.1
CANSAT78G1490 Cannabis sativa HOM05D007159 ORTHO05D009068 7.1e-14 81.6 119 42.9
Haze_02958 Corylus avellana HOM05D007159 ORTHO05D009068 7.8e-13 78.2 40 92.5
MCO13G186 Micromonas commoda HOM05D007159 ORTHO05D009068 1.9e-11 73.6 111 39.6
Os04g0600100 Oryza sativa ssp. japonica HOM05D009116 ORTHO05D011299 2.1e-10 70.1 121 33.1
COL.COLO4_34141 Corchorus olitorius HOM05D009116 ORTHO05D011299 2.4e-09 66.6 143 29.4
QL04p022221 Quercus lobata HOM05D000002 ORTHO05D000001 4.0e-09 65.9 98 46.9
MSTRG.26944 Avicennia marina HOM05D009116 ORTHO05D011299 5.3e-09 65.5 117 31.6
Nitab4.5_0000115g0230 Nicotiana tabacum HOM05D009116 ORTHO05D011299 5.3e-09 65.5 137 32.1
Ciclev10012634m.g Citrus clementina HOM05D009116 ORTHO05D011299 6.9e-09 65.1 106 31.1
Nitab4.5_0003012g0090 Nicotiana tabacum HOM05D009116 ORTHO05D011299 1.2e-08 64.3 117 34.2
Migut.F00112 Erythranthe guttata HOM05D009116 ORTHO05D011299 1.5e-08 63.9 114 31.6
Oeu038114.2 Olea europaea HOM05D002675 ORTHO05D003322 2.0e-08 63.5 128 30.5
unitig_52.g17699 Utricularia gibba HOM05D009116 ORTHO05D011299 2.0e-08 63.5 111 31.5
Mapoly0065s0044 Marchantia polymorpha HOM05D009116 ORTHO05D011299 2.6e-08 63.2 141 33.3
Rhsim03G0219300 Rhododendron simsii HOM05D009116 ORTHO05D011299 4.5e-08 62.4 121 29.8
Eucgr.H00677 Eucalyptus grandis HOM05D009116 ORTHO05D011299 5.8e-08 62.0 108 32.4
PGSC0003DMG400027028 Solanum tuberosum HOM05D009116 ORTHO05D011299 9.9e-08 61.2 115 32.2
CAN.G65.136 Capsicum annuum HOM05D009116 ORTHO05D011299 1.3e-07 60.8 115 31.3
Hund27206 Selenicereus undatus HOM05D009116 ORTHO05D011299 1.3e-07 60.8 108 31.5
EL10Ac1g00288 Beta vulgaris HOM05D009116 ORTHO05D011299 1.7e-07 60.5 117 31.6
Solyc06g072930.4 Solanum lycopersicum HOM05D009116 ORTHO05D011299 2.2e-07 60.1 115 31.3
Sopen06g029290 Solanum pennellii HOM05D009116 ORTHO05D011299 2.2e-07 60.1 115 31.3
PGR031G3920 Punica granatum HOM05D009116 ORTHO05D011299 2.9e-07 59.7 117 30.8
AagrBONN_evm.TU.Sc2ySwM_368.2113 Anthoceros agrestis HOM05D009116 ORTHO05D011299 6.4e-07 58.5 115 32.2
CDE02G3635 Ceratophyllum demersum HOM05D009116 ORTHO05D011299 6.4e-07 58.5 112 33.0
Pp3c5_14710 Physcomitrium patens HOM05D009116 ORTHO05D011299 6.4e-07 58.5 121 27.3
CBR_g20118 Chara braunii HOM05D009116 ORTHO05D011299 1.4e-06 57.4 115 31.3
Nn1g02040 Nelumbo nucifera HOM05D009116 ORTHO05D011299 3.2e-06 56.2 82 35.4
Pp3c2_11540 Physcomitrium patens HOM05D009116 ORTHO05D011299 9.3e-06 54.7 125 29.6


User provided reference genes

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