Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006063g0030 Nicotiana tabacum HOM05D006190 ORTHO05D008260 0.0e+00 1186.0 586 100.0
Sopen05g026250 Solanum pennellii HOM05D006190 ORTHO05D008260 3.6e-287 991.1 558 87.8
Solyc05g042120.4 Solanum lycopersicum HOM05D006190 ORTHO05D008260 4.7e-271 937.6 521 88.7
Nitab4.5_0000019g0350 Nicotiana tabacum HOM05D006190 ORTHO05D008260 1.6e-266 922.5 580 82.6
CSS0039152 Camellia sinensis var. sinensis HOM05D006190 ORTHO05D008260 2.5e-248 862.1 571 73.2
Dinv39750 Davidia involucrata HOM05D006190 ORTHO05D008260 5.8e-245 850.9 568 72.7
Peaxi162Scf00100g01525 Petunia axillaris HOM05D006190 ORTHO05D008260 1.4e-243 846.3 521 81.6
MD17G1106200 Malus domestica HOM05D006190 ORTHO05D008260 3.9e-241 838.2 569 71.7
Prupe.3G210000 Prunus persica HOM05D006190 ORTHO05D008260 1.5e-240 836.3 569 71.5
Gohir.A07G082100 Gossypium hirsutum HOM05D006190 ORTHO05D008260 2.5e-240 835.5 568 72.4
Rhsim04G0034400 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.3e-240 834.7 564 71.8
Gohir.D07G088600 Gossypium hirsutum HOM05D006190 ORTHO05D008260 5.6e-240 834.3 568 72.0
Gorai.001G095000 Gossypium raimondii HOM05D006190 ORTHO05D008260 3.7e-239 831.6 568 72.0
vmacro12161 Vaccinium macrocarpon HOM05D006190 ORTHO05D008260 6.2e-239 830.9 565 72.0
Lj1A781G46 Lonicera japonica HOM05D006190 ORTHO05D008260 8.1e-239 830.5 559 71.9
Ciclev10017756m.g Citrus clementina HOM05D006190 ORTHO05D008260 5.3e-238 827.8 567 71.8
Actinidia09748 Actinidia chinensis HOM05D006190 ORTHO05D008260 1.7e-236 822.8 569 71.0
Thecc.01G182400 Theobroma cacao HOM05D006190 ORTHO05D008260 4.9e-236 821.2 567 70.9
Rhsim06G0167400 Rhododendron simsii HOM05D006190 ORTHO05D008260 1.4e-235 819.7 564 71.1
Potri.002G224300 Populus trichocarpa HOM05D006190 ORTHO05D008260 1.2e-234 816.6 572 69.9
FAN14G2650 Fragaria x ananassa HOM05D006190 ORTHO05D008260 6.0e-234 814.3 576 68.6
FAN02G1605 Fragaria x ananassa HOM05D006190 ORTHO05D008260 3.0e-233 812.0 588 67.5
Manes.13G065900 Manihot esculenta HOM05D006190 ORTHO05D008260 5.1e-233 811.2 572 71.0
GSVIVG01030506001 Vitis vinifera HOM05D006190 ORTHO05D008260 1.9e-232 809.3 567 69.1
RcHm_v2.0_Chr2g0158021 Rosa chinensis HOM05D006190 ORTHO05D008260 1.3e-231 806.6 570 68.8
Sed0027843 Sechium edule HOM05D006190 ORTHO05D008260 6.3e-231 804.3 570 68.4
TWI36G1256 Tripterygium wilfordii HOM05D006190 ORTHO05D008260 1.4e-230 803.1 567 69.7
MSTRG.8117 Avicennia marina HOM05D006190 ORTHO05D008260 1.2e-229 800.0 564 71.1
MD09G1114700 Malus domestica HOM05D006190 ORTHO05D008260 3.4e-229 798.5 629 63.9
Migut.F01671 Erythranthe guttata HOM05D006190 ORTHO05D008260 5.9e-229 797.7 562 70.6
CsaV3_6G037760 Cucumis sativus L. HOM05D006190 ORTHO05D008260 5.0e-228 794.7 570 68.4
DCAR_019742 Daucus carota HOM05D006190 ORTHO05D008260 6.5e-228 794.3 568 68.1
Atru.chr6.3259 Acer truncatum HOM05D006190 ORTHO05D008260 1.4e-227 793.1 571 68.7
Cfa014317 Carpinus fangiana HOM05D006190 ORTHO05D008260 1.9e-227 792.7 531 72.9
Sabra02G0171700 Salix brachista HOM05D006190 ORTHO05D008260 3.2e-227 792.0 595 66.7
ClCG09G011200 Citrullus lanatus HOM05D006190 ORTHO05D008260 4.2e-227 791.6 570 68.1
FAN05G0691 Fragaria x ananassa HOM05D006190 ORTHO05D008260 5.5e-227 791.2 627 63.2
PGR083G2874 Punica granatum HOM05D006190 ORTHO05D008260 4.6e-226 788.1 568 68.5
HanXRQChr03g0075981 Helianthus annuus HOM05D006190 ORTHO05D008260 2.4e-222 775.8 569 67.7
FvH4_6g42100 Fragaria vesca HOM05D006190 ORTHO05D008260 5.3e-222 774.6 551 68.4
THA.LOC104800883 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 4.5e-221 771.5 567 67.0
THA.LOC104798591 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 7.7e-221 770.8 570 66.8
ECA240G2645 Erigeron canadensis HOM05D006190 ORTHO05D008260 2.9e-220 768.8 561 66.7
Nn1g07299 Nelumbo nucifera HOM05D006190 ORTHO05D008260 2.9e-220 768.8 569 67.0
EL10Ac8g20037 Beta vulgaris HOM05D006190 ORTHO05D008260 5.0e-220 768.1 567 66.3
Sc06g0009680 Simmondsia chinensis HOM05D006190 ORTHO05D008260 3.9e-217 758.4 571 65.0
Rhsim04G0027600 Rhododendron simsii HOM05D006190 ORTHO05D008260 2.6e-216 755.7 565 67.4
Sp4g13810 Schrenkiella parvula HOM05D006190 ORTHO05D008260 1.3e-215 753.4 566 65.5
Thhalv10016459m.g Eutrema salsugineum HOM05D006190 ORTHO05D008260 1.4e-214 750.0 567 64.7
BcaC02g11229 Brassica carinata HOM05D006190 ORTHO05D008260 1.2e-213 746.9 567 64.2
AL4G26570 Arabidopsis lyrata HOM05D006190 ORTHO05D008260 1.5e-213 746.5 567 65.1
AT2G31340 Arabidopsis thaliana HOM05D006190 ORTHO05D008260 2.2e-212 742.7 567 64.9
arahy.Tifrunner.gnm1.ann1.5R2QIE Arachis hypogaea HOM05D006190 ORTHO05D008260 2.9e-212 742.3 569 64.1
Carub.0004s1265 Capsella rubella HOM05D006190 ORTHO05D008260 5.0e-212 741.5 567 64.6
arahy.Tifrunner.gnm1.ann1.BBUS42 Arachis hypogaea HOM05D006190 ORTHO05D008260 2.7e-210 735.7 569 63.8
Lalb_Chr04g0264321 Lupinus albus HOM05D006190 ORTHO05D008260 7.9e-210 734.2 567 65.3
SGA_v2.0_scaffold13G06447 Striga asiatica HOM05D006190 ORTHO05D008260 1.3e-207 726.9 527 68.5
Phvul.006G013000 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.4e-206 723.4 569 64.7
Glyma.20G058400 Glycine max HOM05D006190 ORTHO05D008260 1.6e-205 719.9 566 63.8
Haze_12765 Corylus avellana HOM05D006190 ORTHO05D008260 2.0e-205 719.5 574 64.5
Aa31LG5G5620 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.3e-204 716.8 546 65.4
Phvul.011G111400 Phaseolus vulgaris HOM05D006190 ORTHO05D008260 1.7e-204 716.5 569 64.1
Lsat_1_v5_gn_9_105860 Lactuca sativa HOM05D006190 ORTHO05D008260 2.6e-200 702.6 509 66.8
BcaB02g10385 Brassica carinata HOM05D006190 ORTHO05D008260 4.4e-200 701.8 545 64.0
Hund00609 Selenicereus undatus HOM05D006190 ORTHO05D008260 1.1e-198 697.2 564 61.7
MELO3C014435.2 Cucumis melo HOM05D006190 ORTHO05D008260 1.4e-198 696.8 595 60.7
Medtr3g080550 Medicago truncatula HOM05D006190 ORTHO05D008260 5.3e-198 694.9 567 60.8
Aqoxy3G00055 Aquilegia oxysepala HOM05D006190 ORTHO05D008260 1.2e-197 693.7 572 60.5
PSO675G0778 Papaver somniferum HOM05D006190 ORTHO05D008260 2.7e-197 692.6 572 61.2
PSO541G5374 Papaver somniferum HOM05D006190 ORTHO05D008260 3.5e-197 692.2 572 61.4
Eucgr.A01784 Eucalyptus grandis HOM05D006190 ORTHO05D008260 5.9e-197 691.4 557 63.2
Lj6g0020329 Lotus japonicus HOM05D006190 ORTHO05D008260 2.1e-194 682.9 567 61.7
Ca_16289_v3 Cicer arietinum L. HOM05D006190 ORTHO05D008260 4.7e-194 681.8 530 63.8
Rhsim04G0033900 Rhododendron simsii HOM05D006190 ORTHO05D008260 4.4e-192 675.2 481 69.9
QL08p030638 Quercus lobata HOM05D006190 ORTHO05D008260 3.0e-185 652.5 493 66.5
CiPaw.03G155000 Carya illinoinensis HOM05D006190 ORTHO05D008260 5.9e-181 638.3 462 68.4
HPP92_020505 Vanilla planifolia HOM05D006190 ORTHO05D008260 1.0e-180 637.5 567 56.3
COL.COLO4_21885 Corchorus olitorius HOM05D006190 ORTHO05D008260 2.9e-180 636.0 461 68.3
MBI19_g03678_MAGBIO Magnolia biondii HOM05D006190 ORTHO05D008260 1.5e-179 633.6 542 60.0
unitig_46.g18456 Utricularia gibba HOM05D006190 ORTHO05D008260 2.3e-177 626.3 589 57.0
Cpa.g.sc132.24 Carica papaya HOM05D006190 ORTHO05D008260 2.2e-175 619.8 685 51.5
Ah.06g190910 Amaranthus hybridus HOM05D006190 ORTHO05D008260 1.6e-173 613.6 563 55.8
Eucgr.K00752 Eucalyptus grandis HOM05D006190 ORTHO05D008260 1.0e-172 610.9 461 66.4
Os09g0296400 Oryza sativa ssp. japonica HOM05D006190 ORTHO05D008260 1.3e-167 594.0 568 53.5
AUR62006846 Chenopodium quinoa HOM05D006190 ORTHO05D008260 2.3e-164 583.2 531 56.7
AUR62000500 Chenopodium quinoa HOM05D006190 ORTHO05D008260 2.5e-163 579.7 531 56.7
ATR0736G101 Amborella trichopoda HOM05D006190 ORTHO05D008260 8.3e-159 564.7 588 50.3
Lsat_1_v5_gn_2_93981 Lactuca sativa HOM05D006190 ORTHO05D008260 1.1e-155 554.3 486 59.3
Zm00001eb309080 Zea mays HOM05D006190 ORTHO05D008260 1.1e-150 537.7 533 51.2
TPR.G342 Trifolium pratense HOM05D006190 ORTHO05D008260 7.6e-136 488.4 410 61.0
Oeu015050.1 Olea europaea HOM05D006190 ORTHO05D008260 7.6e-128 461.8 313 71.9
CAN.G795.2 Capsicum annuum HOM05D006190 ORTHO05D008260 2.1e-125 453.8 252 87.3
A05p14270 Brassica napus HOM05D006190 ORTHO05D008260 1.8e-116 424.1 332 63.3
Psat5g111200 Pisum sativum HOM05D006190 ORTHO05D008260 2.8e-114 416.8 306 65.0
TAR020G0003 Trochodendron aralioides HOM05D006190 ORTHO05D008260 2.6e-112 410.2 318 64.8
VMungo1127G1525 Vigna mungo HOM05D006190 ORTHO05D008260 1.3e-108 397.9 759 35.2
Pp3c23_22000 Physcomitrium patens HOM05D006190 ORTHO05D008260 2.0e-104 384.0 616 37.3
CDE07G0814 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 1.0e-100 371.7 290 60.0
SHI10054 Sapria himalayana HOM05D006190 ORTHO05D000001 3.4e-96 356.7 326 55.5
Sopen11g022430 Solanum pennellii HOM05D006190 ORTHO05D008260 3.6e-93 346.7 198 86.9
CARHR124960 Cardamine hirsuta HOM05D006190 ORTHO05D008260 1.7e-90 337.8 269 64.7
Mapoly0014s0084 Marchantia polymorpha HOM05D006190 ORTHO05D008260 1.1e-89 335.1 597 32.3
FAN18G3300 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.2e-88 331.6 250 66.0
Aa31sc34G90 Aethionema arabicum HOM05D006190 ORTHO05D008260 1.7e-87 327.8 265 60.8
Psat5g111240 Pisum sativum HOM05D006190 ORTHO05D008260 3.3e-83 313.5 273 57.9
TPR.G18389 Trifolium pratense HOM05D006190 ORTHO05D008260 9.4e-78 295.4 204 66.7
SEGI_33791 Sequoiadendron giganteum HOM05D006190 ORTHO05D008260 5.7e-75 286.2 230 59.6
Oeu015049.1 Olea europaea HOM05D006190 ORTHO05D008260 1.7e-63 248.1 153 79.7
SHI10056 Sapria himalayana HOM05D006190 ORTHO05D008260 1.1e-62 245.4 167 64.1
THA.LOC104822845 Tarenaya hassleriana HOM05D006190 ORTHO05D008260 1.2e-61 241.9 140 77.9
C04p19010 Brassica napus HOM05D006190 ORTHO05D008260 1.3e-58 231.9 180 61.7
CBR_g25881 Chara braunii HOM05D006190 ORTHO05D008260 3.4e-51 207.2 318 38.1
BcaC01g05972 Brassica carinata HOM05D006190 ORTHO05D008260 1.7e-42 178.3 182 53.3
TPR.G36458 Trifolium pratense HOM05D006190 ORTHO05D008260 5.4e-41 173.3 172 52.3
Sabra14G0120600 Salix brachista HOM05D006190 ORTHO05D008260 2.4e-36 157.9 176 52.8
QL08p030629 Quercus lobata HOM05D006190 ORTHO05D027094 2.6e-35 154.5 82 86.6
FAN10G3459 Fragaria x ananassa HOM05D006190 ORTHO05D008260 1.4e-33 148.7 144 54.9
Lsat_1_v5_gn_5_72540 Lactuca sativa HOM05D006190 ORTHO05D008260 3.5e-32 144.1 94 67.0
C03p20570 Brassica napus HOM05D006190 ORTHO05D008260 4.0e-28 130.6 150 49.3
Hund15364 Selenicereus undatus HOM05D006190 ORTHO05D027094 2.9e-18 97.8 50 86.0
BcaC01g05961 Brassica carinata HOM05D006190 ORTHO05D008260 5.6e-14 83.6 86 54.7
CDE04G2645 Ceratophyllum demersum HOM05D006190 ORTHO05D008260 2.0e-11 75.1 117 35.9
Lsat_1_v5_gn_1_125520 Lactuca sativa HOM05D006190 ORTHO05D008260 7.6e-11 73.2 64 56.2
BcaC02g11231 Brassica carinata HOM05D006190 ORTHO05D027094 1.3e-10 72.4 57 61.4
BcaB01g04050 Brassica carinata HOM05D006190 ORTHO05D008260 5.6e-06 57.0 63 52.4


User provided reference genes

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