Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006053g0030 Nicotiana tabacum HOM05D007702 ORTHO05D009736 2.6e-125 452.2 250 100.0
Nitab4.5_0010634g0010 Nicotiana tabacum HOM05D007702 ORTHO05D009736 5.4e-99 364.8 232 88.8
Sopen01g045260 Solanum pennellii HOM05D007702 ORTHO05D009736 1.1e-67 260.8 245 62.4
PGSC0003DMG400018255 Solanum tuberosum HOM05D007702 ORTHO05D009736 2.1e-66 256.5 239 62.3
Solyc01g102860.2 Solanum lycopersicum HOM05D007702 ORTHO05D009736 3.9e-65 252.3 226 64.2
Peaxi162Scf00051g00198 Petunia axillaris HOM05D007702 ORTHO05D009736 2.5e-59 233.0 238 59.7
CAN.G2401.1 Capsicum annuum HOM05D000005 ORTHO05D000012 6.9e-54 214.9 121 82.6
Cc03_g07590 Coffea canephora HOM05D007702 ORTHO05D009736 2.9e-52 209.5 256 50.0
MBI07_g12934_MAGBIO Magnolia biondii HOM05D007702 ORTHO05D009736 2.9e-52 209.5 146 67.8
CDE05G1247 Ceratophyllum demersum HOM05D007702 ORTHO05D009736 2.5e-51 206.5 133 73.7
Haze_08173 Corylus avellana HOM05D007702 ORTHO05D009736 3.2e-51 206.1 228 50.4
PGR042G2668 Punica granatum HOM05D007702 ORTHO05D009736 4.2e-51 205.7 153 66.0
TAR383G0542 Trochodendron aralioides HOM05D007702 ORTHO05D009736 5.5e-51 205.3 166 62.7
CiPaw.11G097300 Carya illinoinensis HOM05D007702 ORTHO05D009736 7.2e-51 204.9 150 68.7
Aqoxy7G02739 Aquilegia oxysepala HOM05D007702 ORTHO05D009736 2.7e-50 203.0 227 50.2
AUR62001339 Chenopodium quinoa HOM05D007702 ORTHO05D009736 2.7e-50 203.0 224 51.3
Actinidia21887 Actinidia chinensis HOM05D007702 ORTHO05D009736 1.0e-49 201.1 123 77.2
MD09G1165300 Malus domestica HOM05D007702 ORTHO05D009736 1.8e-49 200.3 129 73.6
Ah.08g217790 Amaranthus hybridus HOM05D007702 ORTHO05D009736 3.0e-49 199.5 121 73.6
Ciclev10032212m.g Citrus clementina HOM05D007702 ORTHO05D009736 3.0e-49 199.5 130 73.1
EL10Ac7g18156 Beta vulgaris HOM05D007702 ORTHO05D009736 3.9e-49 199.1 226 50.0
Cfa012496 Carpinus fangiana HOM05D007702 ORTHO05D009736 5.1e-49 198.7 231 49.4
CANSAT54G2309 Cannabis sativa HOM05D007702 ORTHO05D009736 8.7e-49 198.0 139 69.1
DCAR_007958 Daucus carota HOM05D007702 ORTHO05D009736 1.1e-48 197.6 230 47.8
Nn2g12749 Nelumbo nucifera HOM05D007702 ORTHO05D009736 1.1e-48 197.6 119 77.3
CANSAT54G1387 Cannabis sativa HOM05D007702 ORTHO05D009736 1.9e-48 196.8 139 68.3
Prupe.3G023000 Prunus persica HOM05D007702 ORTHO05D009736 2.5e-48 196.4 237 48.1
Ca_00991_v3 Cicer arietinum L. HOM05D007702 ORTHO05D009736 5.7e-48 195.3 141 66.7
AUR62025666 Chenopodium quinoa HOM05D007702 ORTHO05D009736 7.4e-48 194.9 219 50.2
CSS0020400 Camellia sinensis var. sinensis HOM05D007702 ORTHO05D009736 9.7e-48 194.5 130 70.8
Medtr2g101430 Medicago truncatula HOM05D007702 ORTHO05D009736 1.3e-47 194.1 254 53.9
Thecc.06G057000 Theobroma cacao HOM05D007702 ORTHO05D009736 4.8e-47 192.2 158 61.4
TPR.G39495 Trifolium pratense HOM05D007702 ORTHO05D009736 8.2e-47 191.4 133 72.2
arahy.Tifrunner.gnm1.ann1.TT2UX9 Arachis hypogaea HOM05D007702 ORTHO05D009736 1.1e-46 191.0 154 57.8
Eucgr.J03180 Eucalyptus grandis HOM05D007702 ORTHO05D009736 1.8e-46 190.3 149 62.4
Manes.06G177600 Manihot esculenta HOM05D007702 ORTHO05D009736 1.8e-46 190.3 220 49.1
Sabra08G0002400 Salix brachista HOM05D007702 ORTHO05D009736 3.1e-46 189.5 238 47.5
Sc12g0011180 Simmondsia chinensis HOM05D007715 ORTHO05D009760 5.3e-46 188.7 223 46.6
Migut.I01200 Erythranthe guttata HOM05D007702 ORTHO05D009736 6.9e-46 188.3 129 70.5
RcHm_v2.0_Chr2g0149381 Rosa chinensis HOM05D007702 ORTHO05D009736 9.1e-46 188.0 215 53.5
Potri.008G004800 Populus trichocarpa HOM05D007702 ORTHO05D009736 5.9e-45 185.3 236 50.4
Duzib235G0870 Durio zibethinus HOM05D007702 ORTHO05D009736 7.7e-45 184.9 229 47.6
FvH4_6g36940 Fragaria vesca HOM05D007702 ORTHO05D009736 7.7e-45 184.9 115 75.7
FAN14G5785 Fragaria x ananassa HOM05D007715 ORTHO05D009760 7.7e-45 184.9 115 75.7
CsaV3_7G033690 Cucumis sativus L. HOM05D007702 ORTHO05D009736 1.0e-44 184.5 231 48.9
Gohir.D10G002100 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.0e-44 184.5 254 42.9
BcaB07g33554 Brassica carinata HOM05D007702 ORTHO05D009736 1.3e-44 184.1 238 44.1
MELO3C024282.2 Cucumis melo HOM05D007702 ORTHO05D009736 1.3e-44 184.1 139 63.3
Gohir.A10G002000 Gossypium hirsutum HOM05D007702 ORTHO05D009736 1.3e-44 184.1 254 45.3
Gorai.011G002500 Gossypium raimondii HOM05D007702 ORTHO05D009736 1.7e-44 183.7 147 60.5
Cpa.g.sc155.12 Carica papaya HOM05D007702 ORTHO05D009736 2.2e-44 183.3 233 47.2
FAN02G3529 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.9e-44 183.0 115 74.8
FAN05G4144 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.9e-44 183.0 115 73.9
BcaC08g43279 Brassica carinata HOM05D007702 ORTHO05D009736 8.5e-44 181.4 124 69.4
C06p06290 Brassica napus HOM05D007702 ORTHO05D009736 8.5e-44 181.4 124 69.4
BolC6t35738H Brassica oleracea HOM05D007702 ORTHO05D009736 8.5e-44 181.4 124 69.4
Psat5g305320 Pisum sativum HOM05D007702 ORTHO05D009736 8.5e-44 181.4 116 75.0
AT1G51080 Arabidopsis thaliana HOM05D007702 ORTHO05D009736 1.1e-43 181.0 129 69.0
A06p02690 Brassica napus HOM05D007702 ORTHO05D009736 1.1e-43 181.0 124 68.5
ClCG09G001650 Citrullus lanatus HOM05D007702 ORTHO05D009736 1.4e-43 180.6 132 64.4
Sp1g37800 Schrenkiella parvula HOM05D007702 ORTHO05D009736 1.4e-43 180.6 152 59.2
Thhalv10012117m.g Eutrema salsugineum HOM05D007702 ORTHO05D009736 1.9e-43 180.3 153 60.1
CARHR041100 Cardamine hirsuta HOM05D007702 ORTHO05D009736 3.2e-43 179.5 129 67.4
AL1G58880 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 5.5e-43 178.7 129 68.2
Carub.0001s3998 Capsella rubella HOM05D007702 ORTHO05D009736 7.2e-43 178.3 129 66.7
Atru.chr1.2666 Acer truncatum HOM05D007702 ORTHO05D009736 2.7e-42 176.4 125 64.8
BraA06t23478Z Brassica rapa HOM05D007702 ORTHO05D009736 2.7e-42 176.4 237 44.7
Aa31LG10G3400 Aethionema arabicum HOM05D007702 ORTHO05D009736 3.6e-42 176.0 223 52.5
Oeu049633.1 Olea europaea HOM05D007702 ORTHO05D009736 4.6e-42 175.6 210 51.4
SGA_v2.0_scaffold71G23985 Striga asiatica HOM05D007702 ORTHO05D009736 6.1e-42 175.3 121 66.9
unitig_748.g7485 Utricularia gibba HOM05D007702 ORTHO05D009736 3.0e-41 172.9 119 71.4
THA.LOC104817895 Tarenaya hassleriana HOM05D007702 ORTHO05D009736 1.1e-40 171.0 229 46.7
QL12p001257 Quercus lobata HOM05D007702 ORTHO05D009736 5.7e-40 168.7 210 48.1
COL.COLO4_31154 Corchorus olitorius HOM05D007702 ORTHO05D009736 6.3e-39 165.2 230 45.2
Lsat_1_v5_gn_1_39381 Lactuca sativa HOM05D007702 ORTHO05D009736 8.2e-39 164.9 122 62.3
PSO144G0036 Papaver somniferum HOM05D007702 ORTHO05D009736 1.4e-38 164.1 108 74.1
ATR1126G014 Amborella trichopoda HOM05D007702 ORTHO05D009736 4.5e-37 159.1 140 58.6
GSVIVG01029550001 Vitis vinifera HOM05D007702 ORTHO05D009736 1.0e-36 157.9 224 46.9
PSO423G0097 Papaver somniferum HOM05D007702 ORTHO05D009736 2.5e-35 153.3 121 64.5
SalBow6G4959 Salvia bowleyana HOM05D007702 ORTHO05D009736 1.0e-33 147.9 102 68.6
ECA236G1927 Erigeron canadensis HOM05D007702 ORTHO05D009736 1.8e-33 147.1 126 56.3
Os03g0138900 Oryza sativa ssp. japonica HOM05D007702 ORTHO05D009736 9.7e-32 141.4 116 57.8
vmacro18744 Vaccinium macrocarpon HOM05D007702 ORTHO05D009736 1.7e-31 140.6 120 53.3
Aa31LG6G10000 Aethionema arabicum HOM05D007702 ORTHO05D009736 4.1e-30 136.0 114 57.0
Rhsim08G0250300 Rhododendron simsii HOM05D007702 ORTHO05D009736 1.2e-29 134.4 124 53.2
Pp3c5_18880 Physcomitrium patens HOM05D007702 ORTHO05D009736 3.5e-29 132.9 134 47.8
Mapoly0020s0094 Marchantia polymorpha HOM05D007702 ORTHO05D009736 1.3e-28 131.0 130 47.7
Gorai.011G091300 Gossypium raimondii HOM05D007702 ORTHO05D009736 1.1e-27 127.9 100 62.0
FAN09G0474 Fragaria x ananassa HOM05D007715 ORTHO05D009760 2.3e-25 120.2 84 66.7
AagrBONN_evm.TU.Sc2ySwM_228.5746 Anthoceros agrestis HOM05D007702 ORTHO05D009736 3.0e-25 119.8 166 41.6
Aa31LG3G5120 Aethionema arabicum HOM05D007702 ORTHO05D009736 5.2e-25 119.0 107 55.1
EL10Ac3g06847 Beta vulgaris HOM05D000495 ORTHO05D009736 1.2e-24 117.9 110 57.3
SEGI_14624 Sequoiadendron giganteum HOM05D007702 ORTHO05D009736 2.2e-23 113.6 128 46.1
Zm00001eb230260 Zea mays HOM05D007702 ORTHO05D009736 1.0e-20 104.8 118 47.5
FAN10G3703 Fragaria x ananassa HOM05D007702 ORTHO05D009736 3.6e-10 69.7 49 63.3
FAN07G0391 Fragaria x ananassa HOM05D007702 ORTHO05D009736 4.7e-10 69.3 44 68.2
Dinv37777 Davidia involucrata HOM05D000532 ORTHO05D002745 1.2e-08 64.7 165 40.0
Actinidia21654 Actinidia chinensis HOM05D007715 ORTHO05D009760 9.8e-08 61.6 30 86.7
AL3G14490 Arabidopsis lyrata HOM05D007702 ORTHO05D009736 1.3e-07 61.2 51 56.9
FAN02G1843 Fragaria x ananassa HOM05D007702 ORTHO05D009736 6.3e-07 58.9 44 61.4


User provided reference genes

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