Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0006001g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.1e-87 324.7 166 100.0
Nitab4.5_0000584g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 7.0e-71 270.8 171 83.6
Nitab4.5_0002279g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-69 266.9 180 79.4
Nitab4.5_0000036g0400 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.6e-69 263.8 171 82.5
Nitab4.5_0000890g0220 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-68 263.1 171 81.3
Nitab4.5_0003887g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-67 259.6 178 77.5
Nitab4.5_0003911g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-66 256.5 180 78.3
Nitab4.5_0014828g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.8e-66 254.2 171 81.3
Nitab4.5_0013596g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.4e-65 251.9 168 79.8
Nitab4.5_0000425g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.9e-64 248.1 171 78.4
Nitab4.5_0000829g0130 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.2e-63 243.8 164 79.3
Nitab4.5_0007303g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.7e-62 242.3 171 78.4
Nitab4.5_0002297g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-60 235.7 147 83.0
Nitab4.5_0000786g0280 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.8e-59 232.3 171 74.3
Nitab4.5_0001173g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-57 226.9 136 87.5
Nitab4.5_0006698g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.0e-57 226.1 171 73.7
Nitab4.5_0002806g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.4e-57 224.9 152 79.6
Nitab4.5_0000228g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-56 223.4 140 80.7
Nitab4.5_0003408g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.1e-51 206.1 165 70.3
Nitab4.5_0000730g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-50 203.8 132 81.1
Nitab4.5_0001863g0150 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.2e-49 200.3 139 77.0
Nitab4.5_0001094g0180 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.8e-48 195.3 167 67.1
Nitab4.5_0002944g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-47 193.7 141 74.5
Nitab4.5_0000697g0250 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.9e-45 185.3 139 74.1
Nitab4.5_0001047g0120 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.6e-45 184.5 148 66.9
Nitab4.5_0012202g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.3e-39 164.1 97 84.5
Nitab4.5_0004899g0060 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.3e-37 159.5 104 78.8
Nitab4.5_0000584g0070 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.7e-32 143.3 107 73.8
Nitab4.5_0000008g0780 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.4e-32 141.0 116 67.2
Nitab4.5_0017446g0010 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-30 135.2 92 77.2
Nitab4.5_0000377g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.3e-27 127.1 77 80.5
Nitab4.5_0007137g0050 Nicotiana tabacum HOM05D006864 ORTHO05D284446 1.4e-23 113.6 139 51.1
Nitab4.5_0002870g0050 Nicotiana tabacum HOM05D006864 ORTHO05D286406 2.5e-23 112.8 97 61.9
Nitab4.5_0000021g0990 Nicotiana tabacum HOM05D006864 ORTHO05D282769 4.6e-22 108.6 141 51.1
Nitab4.5_0009921g0050 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-20 101.7 142 39.4
Solyc10g052716.1 Solanum lycopersicum HOM05D000017 ORTHO05D002765 8.2e-19 97.8 141 36.9
Sopen10g023510 Solanum pennellii HOM05D000017 ORTHO05D000013 1.1e-18 97.4 141 36.2
Nitab4.5_0000924g0030 Nicotiana tabacum HOM05D006864 ORTHO05D285280 1.2e-17 94.0 81 69.1
Nitab4.5_0002695g0020 Nicotiana tabacum HOM05D006864 ORTHO05D285932 2.0e-17 93.2 88 56.8
Nitab4.5_0001062g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-15 86.3 91 46.2
Nitab4.5_0006009g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.6e-14 82.0 106 42.5
Nitab4.5_0000231g0410 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.5e-12 76.3 151 33.8
Nitab4.5_0002951g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.7e-12 75.1 108 39.8
Nitab4.5_0001212g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.7e-11 73.6 150 37.3
Nitab4.5_0006248g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 8.2e-11 71.2 96 38.5
Nitab4.5_0005474g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.1e-10 70.9 97 44.3
Nitab4.5_0004728g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.4e-10 70.5 97 39.2
Nitab4.5_0003586g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 3.1e-10 69.3 112 37.5
Nitab4.5_0007069g0020 Nicotiana tabacum HOM05D008401 ORTHO05D002765 5.3e-10 68.6 95 41.1
Nitab4.5_0007029g0020 Nicotiana tabacum HOM05D007248 ORTHO05D002765 6.9e-10 68.2 113 32.7
Nitab4.5_0012915g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.9e-10 68.2 95 41.1
Nitab4.5_0000832g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.1e-10 67.8 164 32.3
Nitab4.5_0001591g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.1e-10 67.8 95 41.1
Nitab4.5_0001947g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 9.1e-10 67.8 173 32.9
Nitab4.5_0004770g0070 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-09 67.4 95 40.0
Nitab4.5_0011275g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-09 67.4 95 40.0
Nitab4.5_0027852g0010 Nicotiana tabacum HOM05D008401 ORTHO05D002765 1.2e-09 67.4 95 40.0
Nitab4.5_0001968g0150 Nicotiana tabacum HOM05D007248 ORTHO05D002765 1.5e-09 67.0 131 30.5
Nitab4.5_0005249g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.0 125 37.6
Nitab4.5_0008359g0020 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.0 97 35.1
Nitab4.5_0010096g0090 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.5e-09 67.0 98 39.8
Nitab4.5_0002951g0110 Nicotiana tabacum HOM05D006864 ORTHO05D284982 2.0e-09 66.6 110 40.9
Nitab4.5_0001816g0240 Nicotiana tabacum HOM05D007248 ORTHO05D002765 4.5e-09 65.5 95 35.8
DCAR_015925 Daucus carota HOM05D006864 ORTHO05D002765 5.9e-09 65.1 150 28.0
Nitab4.5_0006936g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 5.9e-09 65.1 144 34.0
Nitab4.5_0003674g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.0e-08 64.3 160 28.1
Nitab4.5_0012894g0030 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.0e-08 64.3 101 37.6
PGSC0003DMG400009287 Solanum tuberosum HOM05D006864 ORTHO05D002765 1.0e-08 64.3 95 35.8
Nitab4.5_0000103g0330 Nicotiana tabacum HOM05D006864 ORTHO05D000013 2.2e-08 63.2 42 76.2
Nitab4.5_0002430g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 2.2e-08 63.2 92 41.3
Nitab4.5_0004295g0040 Nicotiana tabacum HOM05D006864 ORTHO05D002765 2.2e-08 63.2 98 39.8
Sopen09g015530 Solanum pennellii HOM05D006864 ORTHO05D002765 2.9e-08 62.8 95 33.7
Nitab4.5_0000034g0050 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-08 62.4 142 31.0
Nitab4.5_0003966g0040 Nicotiana tabacum HOM05D008401 ORTHO05D002765 3.8e-08 62.4 95 37.9
Nitab4.5_0020188g0010 Nicotiana tabacum HOM05D007248 ORTHO05D002765 5.0e-08 62.0 95 32.6
Peaxi162Scf00106g02222 Petunia axillaris HOM05D006864 ORTHO05D002765 5.0e-08 62.0 131 29.0
Peaxi162Scf00184g00211 Petunia axillaris HOM05D006864 ORTHO05D002765 5.0e-08 62.0 131 29.0
Nitab4.5_0007360g0070 Nicotiana tabacum HOM05D006864 ORTHO05D002765 6.5e-08 61.6 54 64.8
Nitab4.5_0005376g0100 Nicotiana tabacum HOM05D006864 ORTHO05D002765 8.5e-08 61.2 111 36.0
Peaxi162Scf00164g01221 Petunia axillaris HOM05D006864 ORTHO05D002765 1.1e-07 60.8 131 28.2
Nitab4.5_0005199g0100 Nicotiana tabacum HOM05D006864 ORTHO05D000013 1.4e-07 60.5 97 38.1
SGA_v2.0_scaffold1G00045 Striga asiatica HOM05D010396 ORTHO05D002765 1.4e-07 60.5 94 33.0
Nitab4.5_0011890g0030 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.2e-07 59.3 94 35.1
Nitab4.5_0000403g0060 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.2e-07 58.9 156 32.1
Nitab4.5_0002534g0090 Nicotiana tabacum HOM05D008401 ORTHO05D002765 4.2e-07 58.9 95 40.0
Nitab4.5_0004697g0110 Nicotiana tabacum HOM05D006864 ORTHO05D000013 4.2e-07 58.9 60 50.0
Nitab4.5_0004824g0030 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.2e-07 58.9 97 38.1
Nitab4.5_0003288g0080 Nicotiana tabacum HOM05D008401 ORTHO05D002765 9.4e-07 57.8 74 43.2
SGA_v2.0_scaffold10G05133 Striga asiatica HOM05D015252 ORTHO05D002765 9.4e-07 57.8 97 28.9
Sopen06g004080 Solanum pennellii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 113 38.1
Sopen09g012340 Solanum pennellii HOM05D006864 ORTHO05D000013 1.2e-06 57.4 94 39.4
Nitab4.5_0000374g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-06 57.0 75 37.3
Nitab4.5_0004038g0080 Nicotiana tabacum HOM05D006864 ORTHO05D002765 1.6e-06 57.0 135 29.6
Sopen01g037270 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 113 38.1
Sopen04g019350 Solanum pennellii HOM05D006864 ORTHO05D000013 1.6e-06 57.0 113 38.1
Sopen11g029160 Solanum pennellii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 113 38.1
Nitab4.5_0002373g0160 Nicotiana tabacum HOM05D007248 ORTHO05D002765 3.6e-06 55.8 91 35.2
Sopen03g030620 Solanum pennellii HOM05D000017 ORTHO05D000013 3.6e-06 55.8 113 38.1
Nitab4.5_0000138g0190 Nicotiana tabacum HOM05D006864 ORTHO05D002765 4.7e-06 55.5 77 39.0
Nitab4.5_0001614g0160 Nicotiana tabacum HOM05D008401 ORTHO05D002765 6.1e-06 55.1 156 29.5
CANSAT25G1145 Cannabis sativa HOM05D000017 ORTHO05D000013 7.9e-06 54.7 95 28.4


User provided reference genes

Program Settings