Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005997g0030 Nicotiana tabacum HOM05D006667 ORTHO05D008387 1.2e-138 497.3 413 100.0
Nitab4.5_0004979g0060 Nicotiana tabacum HOM05D006667 ORTHO05D008387 5.5e-133 478.4 413 96.1
Peaxi162Scf00681g00319 Petunia axillaris HOM05D006667 ORTHO05D008387 9.8e-122 441.0 419 87.4
PGSC0003DMG400011513 Solanum tuberosum HOM05D006667 ORTHO05D008387 8.3e-121 438.0 410 87.3
Solyc04g008980.3 Solanum lycopersicum HOM05D006667 ORTHO05D008387 7.8e-119 431.4 410 90.2
Sopen04g004160 Solanum pennellii HOM05D006667 ORTHO05D008387 3.9e-118 429.1 410 90.2
CAN.G274.16 Capsicum annuum HOM05D006667 ORTHO05D008387 8.6e-110 401.4 400 88.5
Actinidia04346 Actinidia chinensis HOM05D006667 ORTHO05D008387 2.5e-101 373.2 408 76.7
Dinv07500 Davidia involucrata HOM05D006667 ORTHO05D008387 2.5e-101 373.2 412 80.6
Migut.L00803 Erythranthe guttata HOM05D006667 ORTHO05D008387 2.3e-99 366.7 404 80.4
Rhsim12G0089400 Rhododendron simsii HOM05D006667 ORTHO05D008387 1.1e-96 357.8 406 74.6
Prupe.1G349400 Prunus persica HOM05D006667 ORTHO05D008387 7.1e-96 355.1 404 75.2
QL03p045401 Quercus lobata HOM05D006667 ORTHO05D008387 2.3e-94 350.1 405 78.3
Hund24389 Selenicereus undatus HOM05D006667 ORTHO05D008387 6.6e-94 348.6 407 79.6
THA.LOC104819372 Tarenaya hassleriana HOM05D006667 ORTHO05D008387 1.1e-93 347.8 408 79.9
FvH4_4g37160 Fragaria vesca HOM05D006667 ORTHO05D008387 7.3e-93 345.1 404 75.5
FAN12G3199 Fragaria x ananassa HOM05D006667 ORTHO05D008387 1.6e-92 344.0 404 75.2
Thhalv10004329m.g Eutrema salsugineum HOM05D006667 ORTHO05D008387 4.7e-92 342.4 407 79.4
BraA06t26360Z Brassica rapa HOM05D006667 ORTHO05D008387 6.2e-92 342.0 407 78.1
RcHm_v2.0_Chr4g0446961 Rosa chinensis HOM05D006667 ORTHO05D008387 1.1e-91 341.3 408 74.5
TAR622G0133 Trochodendron aralioides HOM05D006667 ORTHO05D008387 1.8e-91 340.5 404 74.3
AL6G34600 Arabidopsis lyrata HOM05D006667 ORTHO05D008387 4.0e-91 339.3 407 78.4
SalBow2G2931 Salvia bowleyana HOM05D006667 ORTHO05D008387 4.0e-91 339.3 400 76.0
VMungo0720G1985 Vigna mungo HOM05D006667 ORTHO05D008387 5.2e-91 339.0 411 74.2
Lj6A708T61 Lonicera japonica HOM05D006667 ORTHO05D008387 6.8e-91 338.6 407 73.2
Lj6A713T75 Lonicera japonica HOM05D006667 ORTHO05D008387 6.8e-91 338.6 407 73.2
CSS0023228 Camellia sinensis var. sinensis HOM05D006667 ORTHO05D008387 1.2e-90 337.8 407 75.9
Sed0022119 Sechium edule HOM05D006667 ORTHO05D008387 2.0e-90 337.0 404 79.0
Psat6g234200 Pisum sativum HOM05D006667 ORTHO05D008387 4.4e-90 335.9 405 73.8
Sed0011343 Sechium edule HOM05D006667 ORTHO05D008387 5.8e-90 335.5 404 78.7
Medtr1g114610 Medicago truncatula HOM05D006667 ORTHO05D008387 2.2e-89 333.6 408 74.3
BcaC03g18029 Brassica carinata HOM05D006667 ORTHO05D008387 4.9e-89 332.4 407 73.5
CsaV3_5G029020 Cucumis sativus L. HOM05D006667 ORTHO05D008387 4.9e-89 332.4 410 73.9
ClCG02G014160 Citrullus lanatus HOM05D006667 ORTHO05D008387 6.4e-89 332.0 404 78.5
C02p60910 Brassica napus HOM05D006667 ORTHO05D008387 8.4e-89 331.6 406 73.6
A02p41020 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-88 331.3 406 74.4
MELO3C011757.2 Cucumis melo HOM05D006667 ORTHO05D008387 2.4e-88 330.1 413 72.6
Carub.0006s2112 Capsella rubella HOM05D006667 ORTHO05D008387 9.3e-88 328.2 407 78.4
Hma1.2p1_0044F.1_g026320 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 9.3e-88 328.2 402 77.6
EL10Ac9g22983 Beta vulgaris HOM05D006667 ORTHO05D008387 1.6e-87 327.4 406 77.6
BraA02t09050Z Brassica rapa HOM05D006667 ORTHO05D008387 3.5e-87 326.2 406 74.4
Sabra05G0073100 Salix brachista HOM05D006667 ORTHO05D008387 3.0e-86 323.2 399 72.4
Thecc.02G154400 Theobroma cacao HOM05D006667 ORTHO05D008387 3.0e-86 323.2 413 77.2
Aqoxy3G04313 Aquilegia oxysepala HOM05D006667 ORTHO05D008387 3.9e-86 322.8 398 68.8
Gorai.008G147100 Gossypium raimondii HOM05D006667 ORTHO05D008387 3.9e-86 322.8 410 75.6
DCAR_002607 Daucus carota HOM05D006667 ORTHO05D008387 1.9e-85 320.5 410 71.0
Gohir.D12G135900 Gossypium hirsutum HOM05D006667 ORTHO05D008387 1.9e-85 320.5 404 76.2
Aa31LG11G2790 Aethionema arabicum HOM05D006667 ORTHO05D008387 7.3e-85 318.5 407 72.2
arahy.Tifrunner.gnm1.ann1.IH6UK4 Arachis hypogaea HOM05D006667 ORTHO05D008387 7.3e-85 318.5 413 71.7
CARHR190200 Cardamine hirsuta HOM05D006667 ORTHO05D008387 9.6e-85 318.2 407 72.5
MBI06_g27487_MAGBIO Magnolia biondii HOM05D006667 ORTHO05D008387 6.2e-84 315.5 402 75.6
C07p44230 Brassica napus HOM05D006667 ORTHO05D008387 1.1e-83 314.7 407 72.2
Lj5g0023243 Lotus japonicus HOM05D006667 ORTHO05D008387 1.1e-83 314.7 404 72.0
Manes.04G162700 Manihot esculenta HOM05D006667 ORTHO05D008387 1.4e-83 314.3 401 77.1
Glyma.20G102500 Glycine max HOM05D006667 ORTHO05D008387 2.4e-83 313.5 406 76.6
AT5G23340 Arabidopsis thaliana HOM05D006667 ORTHO05D008387 4.0e-83 312.8 407 75.9
A06p34280 Brassica napus HOM05D006667 ORTHO05D008387 4.0e-83 312.8 407 75.4
CiPaw.05G172300 Carya illinoinensis HOM05D006667 ORTHO05D008387 4.0e-83 312.8 406 73.9
PGR142G2507 Punica granatum HOM05D006667 ORTHO05D008387 5.3e-83 312.4 398 77.9
BcaB07g29860 Brassica carinata HOM05D006667 ORTHO05D008387 6.9e-83 312.0 406 78.1
BolC7t44948H Brassica oleracea HOM05D006667 ORTHO05D008387 6.9e-83 312.0 407 75.4
Cpa.g.sc60.94 Carica papaya HOM05D006667 ORTHO05D008387 9.9e-82 308.1 399 73.7
Glyma.10G286600 Glycine max HOM05D006667 ORTHO05D008387 2.2e-81 307.0 407 72.7
Lalb_Chr02g0143651 Lupinus albus HOM05D006667 ORTHO05D008387 2.2e-81 307.0 410 70.0
Potri.005G088800 Populus trichocarpa HOM05D006667 ORTHO05D008387 2.9e-81 306.6 405 69.4
unitig_749.g13342 Utricularia gibba HOM05D006667 ORTHO05D008387 2.9e-81 306.6 401 69.6
Sc10g0006700 Simmondsia chinensis HOM05D006667 ORTHO05D008387 6.4e-81 305.4 398 70.1
arahy.Tifrunner.gnm1.ann1.F8B6JQ Arachis hypogaea HOM05D006667 ORTHO05D008387 1.9e-80 303.9 399 72.4
MSTRG.8092 Avicennia marina HOM05D006667 ORTHO05D008387 7.1e-80 302.0 403 72.5
Ciclev10033734m.g Citrus clementina HOM05D006667 ORTHO05D008387 3.5e-79 299.7 406 67.7
TWI74G1436 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 3.5e-79 299.7 402 73.9
Hma1.2p1_0044F.1_g026310 Hydrangea macrophylla HOM05D006667 ORTHO05D008387 3.9e-78 296.2 432 58.6
CANSAT78G2402 Cannabis sativa HOM05D006667 ORTHO05D008387 8.7e-78 295.0 404 70.0
Sabra07G0063900 Salix brachista HOM05D006667 ORTHO05D008387 1.1e-77 294.7 465 55.9
TPR.G4129 Trifolium pratense HOM05D006667 ORTHO05D008387 1.1e-75 288.1 406 71.2
Sp2g23820 Schrenkiella parvula HOM05D006667 ORTHO05D008387 5.3e-75 285.8 407 68.8
SGA_v2.0_scaffold80G25957 Striga asiatica HOM05D006667 ORTHO05D008387 3.4e-74 283.1 410 69.5
AUR62032948 Chenopodium quinoa HOM05D006667 ORTHO05D008387 1.4e-72 277.7 411 67.2
Atru.chr11.1242 Acer truncatum HOM05D006667 ORTHO05D008387 2.1e-71 273.9 407 67.3
Cfa008778 Carpinus fangiana HOM05D006667 ORTHO05D008387 2.7e-71 273.5 413 64.2
CDE04G2906 Ceratophyllum demersum HOM05D006667 ORTHO05D008387 1.0e-70 271.6 405 72.6
vmacro15997 Vaccinium macrocarpon HOM05D006667 ORTHO05D008387 3.0e-70 270.0 536 49.8
Ca_11261_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 3.3e-69 266.5 407 67.8
ECA246G5028 Erigeron canadensis HOM05D002605 ORTHO05D002842 4.0e-67 259.6 396 73.2
Lsat_1_v5_gn_3_34481 Lactuca sativa HOM05D006667 ORTHO05D008387 6.9e-67 258.8 399 73.2
Zm00001eb185570 Zea mays HOM05D006667 ORTHO05D008387 9.0e-67 258.5 401 60.1
PSO017G3027 Papaver somniferum HOM05D006667 ORTHO05D008387 1.1e-64 251.5 407 71.3
COL.COLO4_33111 Corchorus olitorius HOM05D006667 ORTHO05D008387 1.9e-64 250.8 403 70.5
HanXRQChr17g0541041 Helianthus annuus HOM05D006667 ORTHO05D008387 2.1e-63 247.3 403 72.0
Oeu027930.1 Olea europaea HOM05D006667 ORTHO05D008387 2.1e-63 247.3 403 71.0
Eucgr.G02589 Eucalyptus grandis HOM05D006667 ORTHO05D008387 1.8e-62 244.2 405 67.9
Ah.03g147880 Amaranthus hybridus HOM05D006667 ORTHO05D008387 3.0e-62 243.4 418 55.3
Haze_11790 Corylus avellana HOM05D006667 ORTHO05D008387 4.5e-58 229.6 408 63.5
TWI53G1716 Tripterygium wilfordii HOM05D006667 ORTHO05D008387 1.9e-56 224.2 402 68.4
AUR62017733 Chenopodium quinoa HOM05D006667 ORTHO05D008387 4.8e-52 209.5 423 53.2
Nn3g18579 Nelumbo nucifera HOM05D006667 ORTHO05D008387 1.4e-51 208.0 404 69.3
HanXRQChr06g0171711 Helianthus annuus HOM05D006667 ORTHO05D008387 3.1e-51 206.8 392 69.1
Gohir.A12G132300 Gossypium hirsutum HOM05D006667 ORTHO05D008387 5.5e-48 196.1 180 66.7
Phvul.007G014200 Phaseolus vulgaris HOM05D006667 ORTHO05D008387 3.9e-46 189.9 180 65.0
PSO170G5099 Papaver somniferum HOM05D006667 ORTHO05D008387 1.7e-44 184.5 407 65.4
SEGI_01489 Sequoiadendron giganteum HOM05D006667 ORTHO05D008387 2.2e-44 184.1 399 64.2
Os02g0636400 Oryza sativa ssp. japonica HOM05D006667 ORTHO05D008387 1.8e-43 181.0 176 54.0
arahy.Tifrunner.gnm1.ann1.6XP1A8 Arachis hypogaea HOM05D006667 ORTHO05D008387 3.0e-38 163.7 108 69.4
arahy.Tifrunner.gnm1.ann1.RI7T4X Arachis hypogaea HOM05D006667 ORTHO05D008387 3.0e-38 163.7 108 69.4
arahy.Tifrunner.gnm1.ann1.ALJ85P Arachis hypogaea HOM05D006667 ORTHO05D008387 1.6e-34 151.4 96 76.0
ATR0618G066 Amborella trichopoda HOM05D006667 ORTHO05D008387 2.0e-34 151.0 398 61.8
Dinv17648 Davidia involucrata HOM05D006667 ORTHO05D008387 2.9e-33 147.1 153 58.2
arahy.Tifrunner.gnm1.ann1.L6WSTP Arachis hypogaea HOM05D006667 ORTHO05D008387 1.9e-32 144.4 99 73.7
HPP92_025485 Vanilla planifolia HOM05D006667 ORTHO05D008387 7.2e-32 142.5 111 62.2
Ca_11262_v3 Cicer arietinum L. HOM05D006667 ORTHO05D008387 1.6e-31 141.4 180 44.4
SMO116G0353 Selaginella moellendorffii HOM05D006667 ORTHO05D008387 9.7e-29 132.1 392 59.9
Potri.007G075600 Populus trichocarpa HOM05D006667 ORTHO05D008387 1.8e-27 127.9 399 37.8
Medtr7g010500 Medicago truncatula HOM05D006667 ORTHO05D008387 1.7e-17 94.7 70 64.3
BcaC04g21805 Brassica carinata HOM05D006667 ORTHO05D008387 1.7e-12 78.2 81 75.3
Nitab4.5_0003794g0040 Nicotiana tabacum HOM05D002813 ORTHO05D003203 1.6e-07 61.6 141 27.0
Sopen08g020490 Solanum pennellii HOM05D002813 ORTHO05D003203 2.1e-07 61.2 141 27.0
C09p27300 Brassica napus HOM05D006667 ORTHO05D008387 4.7e-07 60.1 106 57.5
ECA236G1847 Erigeron canadensis HOM05D005998 ORTHO05D007664 4.7e-07 60.1 157 29.9
PGSC0003DMG400002228 Solanum tuberosum HOM05D002813 ORTHO05D003203 4.7e-07 60.1 141 26.2
C06p28130 Brassica napus HOM05D006667 ORTHO05D008387 1.4e-06 58.5 88 58.0
BolC6t37979H Brassica oleracea HOM05D006667 ORTHO05D008387 1.4e-06 58.5 88 61.4
Haze_04113 Corylus avellana HOM05D002125 ORTHO05D002105 2.3e-06 57.8 101 30.7
Nitab4.5_0004209g0030 Nicotiana tabacum HOM05D001818 ORTHO05D001780 2.3e-06 57.8 148 27.7
BolC6t38487H Brassica oleracea HOM05D006667 ORTHO05D008387 3.0e-06 57.4 88 64.8
BcaB01g06117 Brassica carinata HOM05D002125 ORTHO05D002105 5.2e-06 56.6 110 30.0
A03p00120 Brassica napus HOM05D002125 ORTHO05D002105 5.2e-06 56.6 110 30.0
BolC3t12601H Brassica oleracea HOM05D002125 ORTHO05D002105 5.2e-06 56.6 110 30.0
BraA03t09402Z Brassica rapa HOM05D002125 ORTHO05D002105 5.2e-06 56.6 110 30.0
Pp3c10_8230 Physcomitrium patens HOM05D006667 ORTHO05D008387 6.8e-06 56.2 58 51.7
Ah.08g209960 Amaranthus hybridus HOM05D002125 ORTHO05D002105 8.9e-06 55.8 178 27.0
Sabra17G0048300 Salix brachista HOM05D005998 ORTHO05D007664 8.9e-06 55.8 140 32.1


User provided reference genes

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