Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005994g0010 Nicotiana tabacum HOM05D017485 ORTHO05D020287 2.4e-139 498.8 249 100.0
Nitab4.5_0002467g0070 Nicotiana tabacum HOM05D017485 ORTHO05D020287 1.3e-121 439.9 252 88.5
PGSC0003DMG404024620 Solanum tuberosum HOM05D017485 ORTHO05D020287 7.1e-83 311.2 261 65.5
Peaxi162Scf00017g03281 Petunia axillaris HOM05D017485 ORTHO05D020287 2.3e-81 306.2 237 70.0
CAN.G982.40 Capsicum annuum HOM05D017485 ORTHO05D020287 7.3e-80 301.2 262 65.6
Solyc03g114750.3 Solanum lycopersicum HOM05D017485 ORTHO05D020287 1.4e-78 297.0 260 64.6
Sopen03g033830 Solanum pennellii HOM05D017485 ORTHO05D020287 1.7e-68 263.5 236 64.4
Dinv38641 Davidia involucrata HOM05D003025 ORTHO05D003305 8.0e-18 95.1 320 30.6
QL10p020762 Quercus lobata HOM05D011573 ORTHO05D003305 4.8e-15 85.9 256 31.2
MD06G1205800 Malus domestica HOM05D003025 ORTHO05D003305 2.0e-13 80.5 265 30.9
Glyma.06G206200 Glycine max HOM05D011573 ORTHO05D014451 1.3e-12 77.8 268 26.9
RcHm_v2.0_Chr7g0183741 Rosa chinensis HOM05D003025 ORTHO05D003305 1.3e-12 77.8 285 27.7
Prupe.5G210100 Prunus persica HOM05D003025 ORTHO05D003305 5.0e-12 75.9 275 30.9
Sabra15G0078800 Salix brachista HOM05D003025 ORTHO05D003305 6.5e-12 75.5 271 27.3
Thecc.03G108500 Theobroma cacao HOM05D003025 ORTHO05D003305 4.2e-11 72.8 289 27.7
Potri.015G048400 Populus trichocarpa HOM05D003025 ORTHO05D003305 1.2e-10 71.2 278 26.6
Glyma.04G158900 Glycine max HOM05D011573 ORTHO05D014451 1.6e-10 70.9 268 25.4
Ciclev10021731m.g Citrus clementina HOM05D003025 ORTHO05D003305 1.0e-09 68.2 267 29.2
GSVIVG01008155001 Vitis vinifera HOM05D003025 ORTHO05D003305 1.0e-09 68.2 322 26.1
Cc04_g08270 Coffea canephora HOM05D003025 ORTHO05D003305 1.4e-09 67.8 51 62.7
Duzib205G1035 Durio zibethinus HOM05D003025 ORTHO05D003305 1.8e-09 67.4 288 27.1
ClCG06G015430 Citrullus lanatus HOM05D025218 ORTHO05D025068 2.3e-09 67.0 297 28.6
arahy.Tifrunner.gnm1.ann1.H5DBWR Arachis hypogaea HOM05D011573 ORTHO05D014451 4.0e-09 66.2 264 25.8
Phvul.009G203900 Phaseolus vulgaris HOM05D011573 ORTHO05D014451 1.2e-08 64.7 270 26.7
Actinidia19904 Actinidia chinensis HOM05D003025 ORTHO05D003305 1.5e-08 64.3 285 26.7
Gohir.A07G058700 Gossypium hirsutum HOM05D003025 ORTHO05D003305 3.3e-08 63.2 245 27.8
Sed0026748 Sechium edule HOM05D025218 ORTHO05D025068 4.4e-08 62.8 291 24.7
Hma1.2p1_0060F.1_g032730 Hydrangea macrophylla HOM05D003025 ORTHO05D003305 7.5e-08 62.0 50 58.0
Gorai.001G067100 Gossypium raimondii HOM05D003025 ORTHO05D003305 9.7e-08 61.6 244 25.4
Gohir.D07G063600 Gossypium hirsutum HOM05D003025 ORTHO05D003305 1.7e-07 60.8 244 25.4
MD13G1056500 Malus domestica HOM05D003025 ORTHO05D003305 2.2e-07 60.5 57 54.4
CiPaw.16G080200 Carya illinoinensis HOM05D003025 ORTHO05D003305 2.8e-07 60.1 232 26.7
Actinidia07767 Actinidia chinensis HOM05D003025 ORTHO05D003305 3.7e-07 59.7 57 50.9
Gohir.D13G085500 Gossypium hirsutum HOM05D003025 ORTHO05D003305 6.3e-07 58.9 50 56.0
Gorai.013G097400 Gossypium raimondii HOM05D003025 ORTHO05D003305 6.3e-07 58.9 50 56.0
PSO017G6048 Papaver somniferum HOM05D003025 ORTHO05D003305 6.3e-07 58.9 307 24.1
PSO063G1603 Papaver somniferum HOM05D003025 ORTHO05D003305 8.2e-07 58.5 50 58.0
MD16G1055400 Malus domestica HOM05D003025 ORTHO05D003305 1.1e-06 58.2 50 56.0
PSO782G5508 Papaver somniferum HOM05D003025 ORTHO05D003305 1.1e-06 58.2 89 40.4
MD14G1216700 Malus domestica HOM05D003025 ORTHO05D003305 1.4e-06 57.8 261 28.4
VMungo1309G0453 Vigna mungo HOM05D011573 ORTHO05D014451 1.4e-06 57.8 274 24.8
CSS0030291 Camellia sinensis var. sinensis HOM05D003025 ORTHO05D003305 1.8e-06 57.4 238 29.4
Gohir.A13G088100 Gossypium hirsutum HOM05D003025 ORTHO05D003305 1.8e-06 57.4 50 54.0
Medtr2g461480 Medicago truncatula HOM05D011573 ORTHO05D014451 1.8e-06 57.4 262 25.2
CDE10G0686 Ceratophyllum demersum HOM05D003025 ORTHO05D003305 3.1e-06 56.6 85 42.4
MBI15_g31908_MAGBIO Magnolia biondii HOM05D003025 ORTHO05D003305 3.1e-06 56.6 62 46.8
CiPaw.05G121600 Carya illinoinensis HOM05D003025 ORTHO05D003305 4.1e-06 56.2 61 49.2
CiPaw.06G095000 Carya illinoinensis HOM05D003025 ORTHO05D003305 5.3e-06 55.8 64 45.3
Glyma.01G064900 Glycine max HOM05D003025 ORTHO05D003305 5.3e-06 55.8 48 58.3
Sed0001557 Sechium edule HOM05D003025 ORTHO05D003305 5.3e-06 55.8 47 57.4
arahy.Tifrunner.gnm1.ann1.8UFH9N Arachis hypogaea HOM05D003025 ORTHO05D003305 7.0e-06 55.5 47 59.6
Duzib248G1661 Durio zibethinus HOM05D003025 ORTHO05D003305 7.0e-06 55.5 47 55.3
Duzib251G0179 Durio zibethinus HOM05D003025 ORTHO05D003305 7.0e-06 55.5 47 55.3
FAN13G2721 Fragaria x ananassa HOM05D003025 ORTHO05D003305 7.0e-06 55.5 50 54.0
FAN18G0971 Fragaria x ananassa HOM05D003025 ORTHO05D003305 7.0e-06 55.5 50 54.0
Potri.010G138100 Populus trichocarpa HOM05D003025 ORTHO05D003305 7.0e-06 55.5 47 57.4
CANSAT64G2528 Cannabis sativa HOM05D003025 ORTHO05D003305 9.1e-06 55.1 47 57.4
CANSAT80G0192 Cannabis sativa HOM05D003025 ORTHO05D003305 9.1e-06 55.1 279 25.8
CsaV3_6G033910 Cucumis sativus L. HOM05D003025 ORTHO05D003305 9.1e-06 55.1 82 41.5
Nn4g23540 Nelumbo nucifera HOM05D003025 ORTHO05D003305 9.1e-06 55.1 49 55.1
Phvul.003G038300 Phaseolus vulgaris HOM05D003025 ORTHO05D003305 9.1e-06 55.1 48 58.3
HPP92_015551 Vanilla planifolia HOM05D003025 ORTHO05D003305 9.1e-06 55.1 48 56.2
VMungo1215G0401 Vigna mungo HOM05D003025 ORTHO05D003305 9.1e-06 55.1 48 58.3


User provided reference genes

Program Settings