Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.2e-79 299.7 145 100.0
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.6e-65 250.8 148 85.1
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.3e-57 226.5 126 84.9
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.7e-57 226.1 127 85.8
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 6.6e-57 224.2 149 75.2
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 6.6e-57 224.2 127 85.0
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 1.5e-56 223.0 126 84.1
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 1.5e-56 223.0 125 86.4
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 1.9e-56 222.6 125 86.4
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 1.9e-56 222.6 125 86.4
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 9.5e-56 220.3 127 78.7
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 1.6e-55 219.5 133 78.2
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 2.8e-55 218.8 126 81.7
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 3.6e-55 218.4 126 81.0
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 1.1e-54 216.9 150 72.7
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.0e-53 212.6 148 72.3
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 3.4e-53 211.8 130 77.7
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 5.8e-53 211.1 147 70.1
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 7.6e-53 210.7 118 83.1
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 3.8e-52 208.4 136 72.8
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 4.9e-52 208.0 128 75.8
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 1.4e-51 206.5 128 75.8
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 2.4e-51 205.7 128 75.8
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 3.2e-51 205.3 127 76.4
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.1e-51 204.9 147 69.4
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 4.1e-51 204.9 128 74.2
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 4.1e-51 204.9 127 76.4
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 1.2e-50 203.4 139 70.5
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.6e-50 203.0 118 79.7
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 2.7e-50 202.2 127 74.8
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 4.6e-50 201.4 126 73.8
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 4.6e-50 201.4 128 74.2
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.3e-49 199.9 131 72.5
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 2.3e-49 199.1 140 69.3
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 2.3e-49 199.1 147 65.3
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 3.0e-49 198.7 130 73.1
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 3.0e-49 198.7 130 73.8
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 3.0e-49 198.7 130 73.8
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 3.0e-49 198.7 128 71.1
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 5.1e-49 198.0 126 72.2
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 8.7e-49 197.2 130 71.5
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.5e-48 196.4 127 72.4
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.5e-48 195.7 130 72.3
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 2.5e-48 195.7 146 67.1
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 3.3e-48 195.3 128 71.1
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 3.3e-48 195.3 118 75.4
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.6e-48 193.7 128 70.3
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 1.6e-47 193.0 131 70.2
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 8.1e-47 190.7 132 66.7
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 8.1e-47 190.7 133 66.9
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 8.1e-47 190.7 150 64.7
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 1.1e-46 190.3 138 68.1
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 1.4e-46 189.9 119 71.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 2.4e-46 189.1 130 68.5
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 4.0e-46 188.3 116 73.3
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 5.2e-46 188.0 149 61.7
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 9.0e-46 187.2 120 73.3
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 1.2e-45 186.8 100 86.0
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 2.0e-45 186.0 126 67.5
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 2.6e-45 185.7 128 69.5
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 4.4e-45 184.9 120 72.5
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 7.6e-45 184.1 137 65.7
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 1.3e-44 183.3 118 72.0
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 2.2e-44 182.6 133 66.9
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 2.9e-44 182.2 112 72.3
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 2.9e-44 182.2 126 65.9
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 4.9e-44 181.4 119 70.6
Dinv41416 Davidia involucrata HOM05D005630 ORTHO05D006979 1.9e-43 179.5 125 68.8
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.9e-43 179.5 167 56.3
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 5.4e-43 177.9 147 60.5
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 5.4e-43 177.9 136 61.8
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 3.5e-42 175.3 134 61.2
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 7.8e-42 174.1 140 61.4
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 7.8e-42 174.1 118 66.9
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 1.3e-41 173.3 134 63.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 173.3 134 63.4
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 1.3e-41 173.3 134 63.4
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 1.3e-41 173.3 134 63.4
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 1.3e-41 173.3 118 67.8
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.3e-41 173.3 118 69.5
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 1.7e-41 172.9 132 62.1
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 1.7e-41 172.9 117 70.1
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 1.7e-41 172.9 147 59.2
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 2.3e-41 172.6 133 63.2
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 2.3e-41 172.6 131 64.1
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 3.9e-41 171.8 140 60.7
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 3.9e-41 171.8 135 61.5
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 5.1e-41 171.4 168 51.8
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 5.1e-41 171.4 117 69.2
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 5.1e-41 171.4 118 68.6
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 1.1e-40 170.2 134 61.2
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 1.9e-40 169.5 132 60.6
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 1.9e-40 169.5 104 75.0
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 1.9e-40 169.5 104 75.0
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 2.5e-40 169.1 134 61.2
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 2.5e-40 169.1 129 62.0
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 4.3e-40 168.3 139 58.3
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 5.6e-40 167.9 135 59.3
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 9.6e-40 167.2 140 58.6
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 9.6e-40 167.2 132 60.6
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 1.3e-39 166.8 139 58.3
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 1.3e-39 166.8 139 59.0
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 1.3e-39 166.8 146 56.8
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 1.6e-39 166.4 131 61.1
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 2.8e-39 165.6 129 60.5
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 3.6e-39 165.2 118 66.1
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 6.2e-39 164.5 122 63.9
Thecc.10G171800 Theobroma cacao HOM05D005630 ORTHO05D006979 5.3e-38 161.4 111 68.5
unitig_48.g30288 Utricularia gibba HOM05D005630 ORTHO05D006979 9.9e-37 157.1 104 68.3
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 6.4e-36 154.5 133 57.9
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 8.4e-36 154.1 135 57.0
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 8.4e-36 154.1 98 69.4
Ah.01g003710 Amaranthus hybridus HOM05D005630 ORTHO05D006979 9.3e-35 150.6 113 64.6
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 9.3e-35 150.6 122 61.5
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 9.6e-32 140.6 84 76.2
Pp3c3_21570 Physcomitrium patens HOM05D005630 ORTHO05D006979 2.4e-27 125.9 97 53.6
Eucgr.B02192 Eucalyptus grandis HOM05D005630 ORTHO05D006979 4.2e-27 125.2 83 67.5
AagrBONN_evm.TU.Sc2ySwM_117.2919 Anthoceros agrestis HOM05D005630 ORTHO05D006979 2.3e-25 119.4 101 53.5
Mapoly0179s0002 Marchantia polymorpha HOM05D005630 ORTHO05D006979 4.3e-24 115.2 97 53.6
SMO146G0230 Selaginella moellendorffii HOM05D005630 ORTHO05D006979 2.1e-23 112.8 101 49.5
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 1.5e-21 106.7 61 78.7
CBR_g37184 Chara braunii HOM05D005630 ORTHO05D006979 3.4e-21 105.5 122 45.9
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 1.1e-19 100.5 61 72.1
Cpa.g.sc20.36 Carica papaya HOM05D005630 ORTHO05D006979 3.2e-19 99.0 88 56.8
Eucgr.L01073 Eucalyptus grandis HOM05D005630 ORTHO05D006979 9.3e-19 97.4 68 66.2
Nn2g11495 Nelumbo nucifera HOM05D005630 ORTHO05D006979 2.1e-18 96.3 64 67.2
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.3e-17 92.8 61 67.2
ATR1096G006 Amborella trichopoda HOM05D005630 ORTHO05D006979 6.7e-17 91.3 67 65.7
MBI07_g26347_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 1.5e-16 90.1 69 60.9
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 9.7e-16 87.4 61 63.9
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 1.6e-15 86.7 85 49.4
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 1.2e-13 80.5 57 66.7
SalBow1G6627 Salvia bowleyana HOM05D005630 ORTHO05D006979 5.0e-12 75.1 52 67.3
MCO04G088 Micromonas commoda HOM05D005630 ORTHO05D006979 3.6e-10 68.9 116 29.3
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 4.6e-10 68.6 49 63.3
AUR62039003 Chenopodium quinoa HOM05D005630 ORTHO05D006979 2.3e-09 66.2 48 56.2
Cre12.g558000 Chlamydomonas reinhardtii HOM05D005630 ORTHO05D006979 3.9e-09 65.5 96 35.4
Medtr5g037160 Medicago truncatula HOM05D005630 ORTHO05D000782 2.2e-07 59.7 34 73.5


User provided reference genes

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