Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005971g0010 Nicotiana tabacum HOM05D000358 ORTHO05D009346 3.7e-94 348.2 179 100.0
Nitab4.5_0004318g0030 Nicotiana tabacum HOM05D000358 ORTHO05D009346 6.8e-88 327.4 180 94.4
Sopen09g027050 Solanum pennellii HOM05D000358 ORTHO05D009346 9.0e-72 273.9 181 82.3
Solyc09g065300.4 Solanum lycopersicum HOM05D000358 ORTHO05D009346 8.7e-67 257.3 212 70.3
Peaxi162Scf00641g00315 Petunia axillaris HOM05D000358 ORTHO05D009346 1.7e-62 243.0 179 74.9
PGSC0003DMG400019331 Solanum tuberosum HOM05D000358 ORTHO05D009346 2.1e-60 236.1 153 84.3
Dinv32921 Davidia involucrata HOM05D000358 ORTHO05D002525 3.9e-51 205.3 167 64.7
CSS0040373 Camellia sinensis var. sinensis HOM05D000358 ORTHO05D009346 1.3e-49 200.3 180 61.1
GSVIVG01001163001 Vitis vinifera HOM05D000358 ORTHO05D009346 2.9e-46 189.1 168 59.5
Glyma.03G155200 Glycine max HOM05D000358 ORTHO05D009346 8.5e-46 187.6 170 57.1
Cpa.g.sc52.51 Carica papaya HOM05D000358 ORTHO05D009346 1.4e-45 186.8 145 66.2
TAR636G2394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 2.5e-45 186.0 153 62.1
FvH4_2g23371 Fragaria vesca HOM05D000358 ORTHO05D009346 4.2e-45 185.3 165 58.2
TAR375G0394 Trochodendron aralioides HOM05D000358 ORTHO05D009346 4.2e-45 185.3 150 62.7
RcHm_v2.0_Chr6g0290831 Rosa chinensis HOM05D000358 ORTHO05D009346 5.5e-45 184.9 151 62.3
MSTRG.12558 Avicennia marina HOM05D000358 ORTHO05D009346 9.4e-45 184.1 182 58.2
CANSAT25G1780 Cannabis sativa HOM05D000358 ORTHO05D009346 1.2e-44 183.7 143 65.7
Atru.chr5.1460 Acer truncatum HOM05D000358 ORTHO05D009346 1.6e-44 183.3 173 57.2
Sabra05G0160900 Salix brachista HOM05D000358 ORTHO05D009346 1.6e-44 183.3 138 65.2
TWI14G1410 Tripterygium wilfordii HOM05D000358 ORTHO05D009346 3.6e-44 182.2 130 67.7
Phvul.001G152500 Phaseolus vulgaris HOM05D000358 ORTHO05D009346 1.0e-43 180.6 135 65.2
Manes.05G077400 Manihot esculenta HOM05D000358 ORTHO05D009346 1.4e-43 180.3 164 59.1
arahy.Tifrunner.gnm1.ann1.1D6AAZ Arachis hypogaea HOM05D000358 ORTHO05D009346 2.3e-43 179.5 119 68.1
arahy.Tifrunner.gnm1.ann1.M7C8NM Arachis hypogaea HOM05D000358 ORTHO05D009346 2.3e-43 179.5 119 68.1
Lj1g0011093 Lotus japonicus HOM05D000358 ORTHO05D009346 2.3e-43 179.5 130 65.4
MBI04_g20822_MAGBIO Magnolia biondii HOM05D000358 ORTHO05D009346 5.1e-43 178.3 153 56.9
Prupe.8G239600 Prunus persica HOM05D000358 ORTHO05D009346 6.7e-43 177.9 171 56.7
AUR62028609 Chenopodium quinoa HOM05D000358 ORTHO05D009346 1.1e-42 177.2 174 58.6
Migut.N02045 Erythranthe guttata HOM05D000358 ORTHO05D009346 1.1e-42 177.2 117 70.1
Hund09500 Selenicereus undatus HOM05D000358 ORTHO05D009346 1.1e-42 177.2 173 54.9
Thecc.01G276900 Theobroma cacao HOM05D000358 ORTHO05D009346 1.1e-42 177.2 174 56.9
Cc01_g19380 Coffea canephora HOM05D000358 ORTHO05D009346 1.5e-42 176.8 150 63.3
Lj1A47T39 Lonicera japonica HOM05D000358 ORTHO05D009346 1.5e-42 176.8 176 54.5
SGA_v2.0_scaffold81G26022 Striga asiatica HOM05D000358 ORTHO05D009346 2.0e-42 176.4 136 63.2
MD11G1284000 Malus domestica HOM05D000358 ORTHO05D009346 3.3e-42 175.6 174 55.2
EL10Ac5g10557 Beta vulgaris HOM05D000358 ORTHO05D009346 4.3e-42 175.3 174 55.7
ECA247G2961 Erigeron canadensis HOM05D000358 ORTHO05D009346 4.3e-42 175.3 124 66.9
Sp6g02670 Schrenkiella parvula HOM05D000358 ORTHO05D009346 7.4e-42 174.5 131 62.6
HanXRQChr15g0466741 Helianthus annuus HOM05D000358 ORTHO05D009346 9.7e-42 174.1 169 55.6
Carub.0006s3438 Capsella rubella HOM05D000358 ORTHO05D009346 1.7e-41 173.3 161 57.1
Duzib133G0337 Durio zibethinus HOM05D000358 ORTHO05D009346 2.2e-41 172.9 118 70.3
Rhsim13G0026100 Rhododendron simsii HOM05D000358 ORTHO05D009346 2.8e-41 172.6 105 74.3
Thhalv10029025m.g Eutrema salsugineum HOM05D000358 ORTHO05D009346 3.7e-41 172.2 130 62.3
PGR044G2401 Punica granatum HOM05D000358 ORTHO05D009346 3.7e-41 172.2 131 59.5
CARHR251060 Cardamine hirsuta HOM05D000358 ORTHO05D009346 4.8e-41 171.8 128 64.1
AL6G50280 Arabidopsis lyrata HOM05D000358 ORTHO05D009346 8.2e-41 171.0 130 63.1
Lsat_1_v5_gn_9_3480 Lactuca sativa HOM05D000358 ORTHO05D009346 8.2e-41 171.0 126 65.9
Aqoxy2G03373 Aquilegia oxysepala HOM05D000358 ORTHO05D009346 1.1e-40 170.6 154 53.2
SalBow6G4489 Salvia bowleyana HOM05D000358 ORTHO05D009346 1.1e-40 170.6 173 53.2
BcaC03g16171 Brassica carinata HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.0
C02p39090 Brassica napus HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.0
BolC2t09919H Brassica oleracea HOM05D000358 ORTHO05D009346 1.4e-40 170.2 127 63.0
CiPaw.07G090600 Carya illinoinensis HOM05D000358 ORTHO05D009346 1.4e-40 170.2 165 55.8
Sed0015724 Sechium edule HOM05D000358 ORTHO05D009346 1.4e-40 170.2 172 53.5
BcaB05g23661 Brassica carinata HOM05D000358 ORTHO05D009346 2.4e-40 169.5 127 62.2
A02p24950 Brassica napus HOM05D000358 ORTHO05D009346 2.4e-40 169.5 127 63.0
BraA02t07485Z Brassica rapa HOM05D000358 ORTHO05D009346 2.4e-40 169.5 127 63.0
CsaV3_6G037210 Cucumis sativus L. HOM05D000358 ORTHO05D009346 2.4e-40 169.5 150 58.0
Actinidia09124 Actinidia chinensis HOM05D000358 ORTHO05D009346 3.1e-40 169.1 105 72.4
AT4G02725 Arabidopsis thaliana HOM05D000358 ORTHO05D009346 3.1e-40 169.1 143 62.2
PSO761G0166 Papaver somniferum HOM05D000358 ORTHO05D009346 3.1e-40 169.1 158 56.3
Ciclev10022514m.g Citrus clementina HOM05D000358 ORTHO05D009346 4.1e-40 168.7 176 54.0
Gorai.007G137700 Gossypium raimondii HOM05D000358 ORTHO05D009346 4.1e-40 168.7 171 56.1
Eucgr.K03368 Eucalyptus grandis HOM05D000358 ORTHO05D009346 6.9e-40 167.9 159 54.1
PSO210G0760 Papaver somniferum HOM05D000358 ORTHO05D009346 9.1e-40 167.5 142 59.2
BolC9t53153H Brassica oleracea HOM05D000358 ORTHO05D009346 1.2e-39 167.2 151 55.6
Gohir.D11G128700 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.2e-39 167.2 171 56.7
BcaC04g24011 Brassica carinata HOM05D000358 ORTHO05D009346 1.5e-39 166.8 151 55.6
Gohir.A11G123500 Gossypium hirsutum HOM05D000358 ORTHO05D009346 1.5e-39 166.8 148 60.8
Potri.005G210700 Populus trichocarpa HOM05D000358 ORTHO05D009346 1.5e-39 166.8 130 64.6
A09p02150 Brassica napus HOM05D000358 ORTHO05D009346 2.6e-39 166.0 159 52.2
BraA09t35864Z Brassica rapa HOM05D000358 ORTHO05D009346 3.4e-39 165.6 159 51.6
TPR.G35683 Trifolium pratense HOM05D000358 ORTHO05D009346 3.4e-39 165.6 131 61.8
THA.LOC104801239 Tarenaya hassleriana HOM05D000358 ORTHO05D009346 4.5e-39 165.2 109 65.1
Zm00001eb054110 Zea mays HOM05D000358 ORTHO05D009346 5.9e-39 164.9 109 68.8
Medtr7g095090 Medicago truncatula HOM05D000358 ORTHO05D009346 1.7e-38 163.3 165 53.9
Os03g0701300 Oryza sativa ssp. japonica HOM05D000358 ORTHO05D009346 7.2e-37 157.9 100 74.0
vmacro02584 Vaccinium macrocarpon HOM05D000358 ORTHO05D009346 2.7e-36 156.0 159 57.2
C09p02250 Brassica napus HOM05D000358 ORTHO05D009346 2.0e-34 149.8 183 44.3
HPP92_009591 Vanilla planifolia HOM05D002842 ORTHO05D003177 2.0e-34 149.8 165 49.1
Aa31LG5G2370 Aethionema arabicum HOM05D000358 ORTHO05D009346 9.7e-34 147.5 130 55.4
COL.COLO4_09074 Corchorus olitorius HOM05D000358 ORTHO05D009346 1.3e-33 147.1 190 48.4
VMungo1383G1528 Vigna mungo HOM05D000358 ORTHO05D009346 2.2e-33 146.4 165 50.3
Hma1.2p1_0822F.1_g224410 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 2.8e-33 146.0 91 73.6
Hma1.2p1_0822F.1_g224420 Hydrangea macrophylla HOM05D000358 ORTHO05D009346 8.2e-33 144.4 89 74.2
Lalb_Chr01g0020121 Lupinus albus HOM05D000358 ORTHO05D009346 1.2e-31 140.6 98 63.3
Pp3c26_14500 Physcomitrium patens HOM05D000358 ORTHO05D009346 3.8e-30 135.6 118 50.8
Sc17g0001440 Simmondsia chinensis HOM05D000358 ORTHO05D009346 6.5e-30 134.8 118 61.0
SMO340G0322 Selaginella moellendorffii HOM05D000104 ORTHO05D004059 9.4e-29 131.0 111 54.1
Mapoly0004s0031 Marchantia polymorpha HOM05D000358 ORTHO05D009346 1.2e-28 130.6 105 55.2
SMO180G0003 Selaginella moellendorffii HOM05D000358 ORTHO05D009346 1.6e-28 130.2 94 58.5
ATR0332G065 Amborella trichopoda HOM05D000358 ORTHO05D009346 3.6e-28 129.0 115 55.7
Psat3g063840 Pisum sativum HOM05D000358 ORTHO05D009346 1.8e-27 126.7 113 56.6
Atru.BG.13.p Acer truncatum HOM05D000358 ORTHO05D009346 2.3e-27 126.3 97 61.9
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 6.7e-27 124.8 96 61.5
Haze_04693 Corylus avellana HOM05D000358 ORTHO05D009346 6.7e-27 124.8 127 53.5
ClCG07G000330 Citrullus lanatus HOM05D000358 ORTHO05D009346 1.2e-23 114.0 138 48.6
AagrBONN_evm.TU.Sc2ySwM_362.2722 Anthoceros agrestis HOM05D000358 ORTHO05D009346 1.5e-21 107.1 95 55.8
Eucgr.L00778 Eucalyptus grandis HOM05D000358 ORTHO05D009346 1.2e-20 104.0 72 62.5
unitig_899.g15068 Utricularia gibba HOM05D000454 ORTHO05D000591 5.2e-19 98.6 75 58.7
Oeu029468.1 Olea europaea HOM05D000358 ORTHO05D009346 9.1e-16 87.8 101 53.5
Eucgr.C01960 Eucalyptus grandis HOM05D000358 ORTHO05D009346 5.0e-14 82.0 59 59.3
Ah.11g050550 Amaranthus hybridus HOM05D000358 ORTHO05D009346 1.2e-12 77.4 180 36.7
QL12p021343 Quercus lobata HOM05D000358 ORTHO05D009346 2.1e-12 76.6 91 54.9
Nn1g02275 Nelumbo nucifera HOM05D000358 ORTHO05D009346 3.6e-12 75.9 91 49.5
MELO3C014393.2 Cucumis melo HOM05D000358 ORTHO05D009346 7.5e-10 68.2 95 48.4
FAN20G1711 Fragaria x ananassa HOM05D000358 ORTHO05D009346 1.8e-08 63.5 123 35.0


User provided reference genes

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