Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005967g0020 Nicotiana tabacum HOM05D006993 ORTHO05D008336 4.5e-90 334.7 186 100.0
Nitab4.5_0009028g0040 Nicotiana tabacum HOM05D006993 ORTHO05D008336 7.4e-77 290.8 224 77.7
Peaxi162Scf12724g00016 Petunia axillaris HOM05D006993 ORTHO05D008336 1.5e-58 229.9 218 69.3
Solyc09g018890.3 Solanum lycopersicum HOM05D006993 ORTHO05D008336 9.4e-56 220.7 212 63.7
CAN.G3.14 Capsicum annuum HOM05D006993 ORTHO05D008336 1.6e-55 219.9 212 67.0
Sopen09g012650 Solanum pennellii HOM05D006993 ORTHO05D008336 3.9e-54 215.3 212 64.6
PGSC0003DMG400020288 Solanum tuberosum HOM05D006993 ORTHO05D008336 5.7e-53 211.5 212 66.5
Oeu013422.3 Olea europaea HOM05D006993 ORTHO05D008336 9.4e-48 194.1 213 54.9
Oeu049571.1 Olea europaea HOM05D006993 ORTHO05D008336 8.8e-46 187.6 212 59.9
CSS0002802 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.3e-41 173.7 220 57.7
Manes.13G058300 Manihot esculenta HOM05D006993 ORTHO05D008336 1.7e-41 173.3 213 52.1
MSTRG.18520 Avicennia marina HOM05D006993 ORTHO05D008336 6.5e-41 171.4 213 52.6
MD00G1144800 Malus domestica HOM05D006993 ORTHO05D008336 8.5e-41 171.0 165 61.2
GSVIVG01006115001 Vitis vinifera HOM05D006993 ORTHO05D008336 1.9e-40 169.9 163 60.7
Potri.014G172800 Populus trichocarpa HOM05D006993 ORTHO05D008336 4.2e-40 168.7 216 50.5
Sabra14G0132300 Salix brachista HOM05D006993 ORTHO05D008336 7.2e-40 167.9 216 50.5
Actinidia23138 Actinidia chinensis HOM05D006993 ORTHO05D008336 1.2e-39 167.2 214 52.8
CSS0028614 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 1.2e-39 167.2 220 57.3
FvH4_5g27060 Fragaria vesca HOM05D006993 ORTHO05D008336 1.6e-39 166.8 164 59.8
FAN08G3673 Fragaria x ananassa HOM05D006993 ORTHO05D008336 1.6e-39 166.8 164 59.8
QL09p044784 Quercus lobata HOM05D006993 ORTHO05D008336 1.6e-39 166.8 197 52.8
CANSAT11G1969 Cannabis sativa HOM05D006993 ORTHO05D008336 4.7e-39 165.2 216 49.1
Migut.D00756 Erythranthe guttata HOM05D006993 ORTHO05D008336 4.0e-38 162.2 210 50.0
Lalb_Chr17g0342261 Lupinus albus HOM05D006993 ORTHO05D008336 4.0e-38 162.2 205 52.2
Prupe.5G011000 Prunus persica HOM05D006993 ORTHO05D008336 8.8e-38 161.0 164 58.5
Gohir.A11G146100 Gossypium hirsutum HOM05D006993 ORTHO05D008336 1.2e-37 160.6 223 48.9
Gorai.007G162900 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.2e-37 160.6 223 48.9
TPR.G5057 Trifolium pratense HOM05D006993 ORTHO05D008336 3.3e-37 159.1 212 50.0
TAR626G0971 Trochodendron aralioides HOM05D006993 ORTHO05D008336 3.3e-37 159.1 165 57.6
Lsat_1_v5_gn_9_15700 Lactuca sativa HOM05D006993 ORTHO05D008336 2.8e-36 156.0 218 50.5
FAN18G3928 Fragaria x ananassa HOM05D006993 ORTHO05D008336 3.7e-36 155.6 167 56.9
CSS0020795 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 4.8e-36 155.2 210 51.4
Medtr8g028100 Medicago truncatula HOM05D006993 ORTHO05D008336 4.8e-36 155.2 210 51.0
Thecc.01G203600 Theobroma cacao HOM05D006993 ORTHO05D008336 4.8e-36 155.2 235 47.7
TWI18G0796 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 4.8e-36 155.2 218 53.2
Atru.chr6.3467 Acer truncatum HOM05D006993 ORTHO05D008336 6.3e-36 154.8 212 52.8
Cc01_g15720 Coffea canephora HOM05D006993 ORTHO05D008336 6.3e-36 154.8 221 52.5
ATR0751G064 Amborella trichopoda HOM05D006993 ORTHO05D008336 1.1e-35 154.1 162 54.9
Ciclev10016771m.g Citrus clementina HOM05D006993 ORTHO05D008336 1.4e-35 153.7 209 52.6
CSS0001652 Camellia sinensis var. sinensis HOM05D006993 ORTHO05D008336 2.4e-35 152.9 210 51.9
COL.COLO4_19719 Corchorus olitorius HOM05D006993 ORTHO05D008336 5.3e-35 151.8 232 50.0
vmacro02850 Vaccinium macrocarpon HOM05D006993 ORTHO05D008336 7.0e-35 151.4 215 48.4
arahy.Tifrunner.gnm1.ann1.RC1IE0 Arachis hypogaea HOM05D006993 ORTHO05D008336 9.1e-35 151.0 215 51.6
Lj3g0006688 Lotus japonicus HOM05D006993 ORTHO05D008336 9.1e-35 151.0 162 61.1
Duzib211G0651 Durio zibethinus HOM05D006993 ORTHO05D008336 2.0e-34 149.8 176 52.3
Cpa.g.sc8.8 Carica papaya HOM05D006993 ORTHO05D008336 3.5e-34 149.1 209 51.2
Sed0005772 Sechium edule HOM05D006993 ORTHO05D008336 4.5e-34 148.7 165 52.7
FAN04G3061 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.7e-34 147.9 164 61.6
FAN13G2105 Fragaria x ananassa HOM05D006993 ORTHO05D008336 7.7e-34 147.9 164 62.2
Duzib138G1606 Durio zibethinus HOM05D006993 ORTHO05D008336 1.0e-33 147.5 226 46.5
Aqoxy4G02329 Aquilegia oxysepala HOM05D006993 ORTHO05D008336 2.2e-33 146.4 167 57.5
MD15G1141400 Malus domestica HOM05D006993 ORTHO05D008336 2.2e-33 146.4 133 61.7
ECA247G3631 Erigeron canadensis HOM05D006993 ORTHO05D008336 2.9e-33 146.0 208 46.6
CDE03G0427 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 3.8e-33 145.6 164 54.9
Gohir.D07G168900 Gossypium hirsutum HOM05D006993 ORTHO05D008336 5.0e-33 145.2 209 47.4
Lj2A1109T68 Lonicera japonica HOM05D006993 ORTHO05D008336 5.0e-33 145.2 220 52.3
Potri.002G217400 Populus trichocarpa HOM05D006993 ORTHO05D008336 5.0e-33 145.2 193 50.3
CsaV3_5G035360 Cucumis sativus L. HOM05D006993 ORTHO05D008336 6.5e-33 144.8 156 52.6
DCAR_018599 Daucus carota HOM05D000190 ORTHO05D008336 6.5e-33 144.8 166 59.0
AT2G04039 Arabidopsis thaliana HOM05D006993 ORTHO05D008336 8.5e-33 144.4 159 54.7
CiPaw.13G058900 Carya illinoinensis HOM05D006993 ORTHO05D008336 8.5e-33 144.4 217 49.3
MELO3C012348.2 Cucumis melo HOM05D006993 ORTHO05D008336 1.1e-32 144.1 156 53.2
CDE06G2320 Ceratophyllum demersum HOM05D006993 ORTHO05D008336 1.5e-32 143.7 174 51.1
AUR62028621 Chenopodium quinoa HOM05D006993 ORTHO05D008336 1.5e-32 143.7 159 57.2
Ca_23580_v3 Cicer arietinum L. HOM05D006993 ORTHO05D008336 1.5e-32 143.7 111 65.8
Thhalv10002670m.g Eutrema salsugineum HOM05D006993 ORTHO05D008336 1.5e-32 143.7 153 53.6
HanXRQChr08g0230791 Helianthus annuus HOM05D006993 ORTHO05D008336 1.5e-32 143.7 220 45.5
PSO675G6922 Papaver somniferum HOM05D006993 ORTHO05D008336 1.5e-32 143.7 156 52.6
Rhsim13G0056200 Rhododendron simsii HOM05D006570 ORTHO05D008193 1.5e-32 143.7 153 64.7
Nn1g08444 Nelumbo nucifera HOM05D006993 ORTHO05D008336 2.5e-32 142.9 164 60.4
BcaC06g35821 Brassica carinata HOM05D006993 ORTHO05D008336 3.2e-32 142.5 153 55.6
A07p06910 Brassica napus HOM05D006993 ORTHO05D008336 3.2e-32 142.5 154 56.5
BolC7t41517H Brassica oleracea HOM05D006993 ORTHO05D008336 3.2e-32 142.5 153 55.6
BraA07t28482Z Brassica rapa HOM05D006993 ORTHO05D008336 3.2e-32 142.5 154 56.5
Eucgr.H00675 Eucalyptus grandis HOM05D006993 ORTHO05D008336 3.2e-32 142.5 213 52.1
RcHm_v2.0_Chr7g0218061 Rosa chinensis HOM05D006993 ORTHO05D008336 7.2e-32 141.4 164 61.0
AL3G41710 Arabidopsis lyrata HOM05D006993 ORTHO05D008336 9.4e-32 141.0 158 53.2
VMungo0331G1491 Vigna mungo HOM05D006993 ORTHO05D008336 9.4e-32 141.0 210 51.0
C07p10500 Brassica napus HOM05D006993 ORTHO05D008336 1.2e-31 140.6 153 54.9
arahy.Tifrunner.gnm1.ann1.6DX8AG Arachis hypogaea HOM05D006993 ORTHO05D008336 1.6e-31 140.2 78 83.3
Cfa010616 Carpinus fangiana HOM05D006993 ORTHO05D008336 2.7e-31 139.4 157 58.6
MBI15_g35689_MAGBIO Magnolia biondii HOM05D006993 ORTHO05D008336 2.7e-31 139.4 164 59.1
AUR62008046 Chenopodium quinoa HOM05D006993 ORTHO05D008336 6.1e-31 138.3 156 58.3
PSO541G2665 Papaver somniferum HOM05D006993 ORTHO05D008336 8.0e-31 137.9 166 48.8
Glyma.07G059600 Glycine max HOM05D006993 ORTHO05D008336 3.0e-30 136.0 212 52.4
Aa31sc249G30 Aethionema arabicum HOM05D006993 ORTHO05D008336 5.2e-30 135.2 212 46.7
Phvul.010G110000 Phaseolus vulgaris HOM05D006993 ORTHO05D008336 5.2e-30 135.2 208 51.4
Carub.0003s2586 Capsella rubella HOM05D006993 ORTHO05D008336 8.8e-30 134.4 79 81.0
CARHR101970 Cardamine hirsuta HOM05D006993 ORTHO05D008336 8.8e-30 134.4 117 62.4
PGR083G2302 Punica granatum HOM05D006993 ORTHO05D008336 8.8e-30 134.4 76 85.5
Sp3g23040 Schrenkiella parvula HOM05D006993 ORTHO05D008336 1.2e-29 134.0 79 81.0
Gorai.N000700 Gossypium raimondii HOM05D006993 ORTHO05D008336 1.5e-29 133.7 79 82.3
EL10Ac5g10566 Beta vulgaris HOM05D006993 ORTHO05D008336 2.6e-29 132.9 159 56.6
BcaB06g26751 Brassica carinata HOM05D006993 ORTHO05D008336 5.7e-29 131.7 155 60.6
SalBow2G0576 Salvia bowleyana HOM05D006993 ORTHO05D008336 5.7e-29 131.7 148 57.4
Glyma.16G028500 Glycine max HOM05D006993 ORTHO05D008336 1.7e-28 130.2 211 50.7
Duzib133G0497 Durio zibethinus HOM05D006993 ORTHO05D008336 3.7e-28 129.0 75 82.7
Ah.11g050660 Amaranthus hybridus HOM05D006993 ORTHO05D008336 1.8e-27 126.7 229 44.5
SalBow2G2967 Salvia bowleyana HOM05D006993 ORTHO05D008336 4.1e-27 125.6 215 43.7
unitig_736.g22974 Utricularia gibba HOM05D006993 ORTHO05D008336 1.6e-26 123.6 167 47.3
SalBow6G6587 Salvia bowleyana HOM05D006993 ORTHO05D008336 1.1e-24 117.5 205 42.0
Zm00001eb327210 Zea mays HOM05D006993 ORTHO05D008336 1.6e-23 113.6 156 50.6
Zm00001eb108910 Zea mays HOM05D006993 ORTHO05D008336 2.8e-23 112.8 210 38.1
Gohir.A07G162350 Gossypium hirsutum HOM05D006993 ORTHO05D008336 6.1e-23 111.7 231 39.0
ClCG05G021810 Citrullus lanatus HOM05D006993 ORTHO05D008336 1.8e-22 110.2 126 50.8
Os07g0607800 Oryza sativa ssp. japonica HOM05D006993 ORTHO05D008336 1.8e-22 110.2 75 68.0
SMO111G0038 Selaginella moellendorffii HOM05D006993 ORTHO05D008336 2.2e-20 103.2 72 66.7
TWI36G0749 Tripterygium wilfordii HOM05D006993 ORTHO05D008336 2.8e-20 102.8 117 53.8
AagrBONN_evm.TU.Sc2ySwM_344.1609 Anthoceros agrestis HOM05D006993 ORTHO05D008336 5.9e-18 95.1 75 57.3
Mapoly0043s0057 Marchantia polymorpha HOM05D006993 ORTHO05D008336 1.0e-17 94.4 75 61.3
CBR_g51823 Chara braunii HOM05D006993 ORTHO05D008336 8.0e-15 84.7 71 57.7
Pp3c2_17900 Physcomitrium patens HOM05D006993 ORTHO05D008336 1.0e-14 84.3 76 53.9
Psat4g158880 Pisum sativum HOM05D006993 ORTHO05D008336 1.3e-09 67.4 162 35.2


User provided reference genes

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