Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005942g0050 Nicotiana tabacum HOM05D000015 ORTHO05D018412 1.4e-36 155.6 70 100.0
Nitab4.5_0005942g0020 Nicotiana tabacum HOM05D000015 ORTHO05D000734 3.0e-15 84.7 51 72.5
Nitab4.5_0000724g0020 Nicotiana tabacum HOM05D000015 ORTHO05D000734 2.2e-13 78.6 55 65.5
Peaxi162Scf00626g00111 Petunia axillaris HOM05D000015 ORTHO05D018412 4.1e-12 74.3 58 62.1
CAN.G1030.19 Capsicum annuum HOM05D000015 ORTHO05D000734 1.7e-10 68.9 58 55.2
Nitab4.5_0002780g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000734 1.7e-10 68.9 49 65.3
Peaxi162Scf00503g00216 Petunia axillaris HOM05D000015 ORTHO05D000734 3.8e-10 67.8 58 56.9
Peaxi162Scf00626g00012 Petunia axillaris HOM05D000015 ORTHO05D000734 8.5e-10 66.6 62 53.2
Solyc04g078740.2 Solanum lycopersicum HOM05D000015 ORTHO05D000734 1.5e-09 65.9 58 51.7
Sopen04g032340 Solanum pennellii HOM05D000015 ORTHO05D000734 1.5e-09 65.9 58 51.7
PGSC0003DMG400007958 Solanum tuberosum HOM05D000015 ORTHO05D000734 1.5e-09 65.9 58 51.7
CAN.G1194.8 Capsicum annuum HOM05D000015 ORTHO05D000734 9.4e-09 63.2 53 52.8
Peaxi162Scf01073g00010 Petunia axillaris HOM05D000015 ORTHO05D000734 9.4e-09 63.2 53 52.8
Nitab4.5_0011049g0010 Nicotiana tabacum HOM05D000015 ORTHO05D000734 1.2e-08 62.8 53 52.8
Lj4C61G3 Lonicera japonica HOM05D000015 ORTHO05D000734 1.6e-08 62.4 56 53.6
Peaxi162Scf00626g00110 Petunia axillaris HOM05D000015 ORTHO05D018412 1.6e-08 62.4 61 50.8
Solyc12g088780.1 Solanum lycopersicum HOM05D000015 ORTHO05D018412 1.6e-08 62.4 54 55.6
Nitab4.5_0001845g0040 Nicotiana tabacum HOM05D000015 ORTHO05D000734 2.7e-08 61.6 53 52.8
CAN.G1194.6 Capsicum annuum HOM05D000015 ORTHO05D000734 3.6e-08 61.2 53 52.8
Nitab4.5_0001580g0120 Nicotiana tabacum HOM05D000015 ORTHO05D000734 3.6e-08 61.2 53 52.8
Solyc12g088760.1 Solanum lycopersicum HOM05D000015 ORTHO05D000734 3.6e-08 61.2 53 50.9
Sopen12g030670 Solanum pennellii HOM05D000015 ORTHO05D000734 3.6e-08 61.2 53 50.9
Dinv35941 Davidia involucrata HOM05D000015 ORTHO05D000734 4.7e-08 60.8 60 53.3
PGSC0003DMG400015411 Solanum tuberosum HOM05D000015 ORTHO05D000734 4.7e-08 60.8 53 49.1
PGSC0003DMG400015410 Solanum tuberosum HOM05D000015 ORTHO05D000734 8.0e-08 60.1 53 49.1
RcHm_v2.0_Chr2g0105881 Rosa chinensis HOM05D000015 ORTHO05D000734 1.0e-07 59.7 53 50.9
Eucgr.F00206 Eucalyptus grandis HOM05D000015 ORTHO05D000734 4.0e-07 57.8 53 52.8
Eucgr.F00208 Eucalyptus grandis HOM05D000015 ORTHO05D000734 4.0e-07 57.8 58 48.3
CSS0022223 Camellia sinensis var. sinensis HOM05D000015 ORTHO05D000734 5.2e-07 57.4 50 56.0
Eucgr.F00212 Eucalyptus grandis HOM05D000015 ORTHO05D000734 5.2e-07 57.4 67 43.3
DCAR_019441 Daucus carota HOM05D000015 ORTHO05D000734 8.8e-07 56.6 58 44.8
MSTRG.25080 Avicennia marina HOM05D000015 ORTHO05D000734 1.2e-06 56.2 51 56.9
Eucgr.F00207 Eucalyptus grandis HOM05D000015 ORTHO05D000734 1.2e-06 56.2 54 50.0
Actinidia23292 Actinidia chinensis HOM05D000015 ORTHO05D000734 1.5e-06 55.8 55 52.7
CAN.G1194.7 Capsicum annuum HOM05D000015 ORTHO05D000734 1.5e-06 55.8 53 49.1
Eucgr.H05125 Eucalyptus grandis HOM05D000015 ORTHO05D000734 2.6e-06 55.1 54 50.0
Nn1g04813 Nelumbo nucifera HOM05D000015 ORTHO05D000734 3.3e-06 54.7 53 47.2
Sabra14G0018200 Salix brachista HOM05D000015 ORTHO05D000734 3.3e-06 54.7 60 46.7
TAR381G1639 Trochodendron aralioides HOM05D000015 ORTHO05D000734 3.3e-06 54.7 58 48.3
Aqoxy6G01294 Aquilegia oxysepala HOM05D000015 ORTHO05D000734 5.7e-06 53.9 55 41.8
Prupe.7G131900 Prunus persica HOM05D000015 ORTHO05D000734 5.7e-06 53.9 48 54.2
Manes.13G123200 Manihot esculenta HOM05D000015 ORTHO05D000734 7.5e-06 53.5 59 52.5
TAR625G0214 Trochodendron aralioides HOM05D000015 ORTHO05D000734 9.7e-06 53.1 41 61.0


User provided reference genes

Program Settings