Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 6.1e-55 217.2 109 100.0
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 4.2e-32 141.4 105 79.0
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 1.9e-24 115.9 80 77.5
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 1.9e-24 115.9 80 77.5
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 2.8e-23 112.1 79 75.9
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 3.6e-23 111.7 78 70.5
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 4.7e-23 111.3 81 72.8
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 5.2e-22 107.8 83 74.7
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 6.8e-22 107.5 80 71.2
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.6e-21 105.5 88 68.2
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 1.3e-20 103.2 80 71.2
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 1.7e-20 102.8 85 68.2
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 1.7e-20 102.8 78 74.4
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 2.2e-20 102.4 84 71.4
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 2.8e-20 102.1 83 71.1
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 4.9e-20 101.3 82 72.0
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 4.9e-20 101.3 92 64.1
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 6.3e-20 100.9 89 66.3
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 6.3e-20 100.9 82 67.1
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 8.3e-20 100.5 81 67.9
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 8.3e-20 100.5 81 69.1
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 1.1e-19 100.1 80 68.8
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 1.4e-19 99.8 81 71.6
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 2.4e-19 99.0 80 68.8
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 4.1e-19 98.2 78 71.8
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.1e-19 98.2 81 66.7
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 5.4e-19 97.8 105 57.1
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 5.4e-19 97.8 79 70.9
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.4e-19 97.8 76 67.1
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 5.4e-19 97.8 80 67.5
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 9.2e-19 97.1 86 66.3
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 1.2e-18 96.7 84 67.9
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 1.2e-18 96.7 98 57.1
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.6e-18 96.3 81 69.1
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.6e-18 96.3 85 64.7
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 2.0e-18 95.9 81 67.9
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 2.0e-18 95.9 90 62.2
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 2.7e-18 95.5 80 67.5
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 2.7e-18 95.5 80 65.0
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 2.7e-18 95.5 82 67.1
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 4.5e-18 94.7 80 70.0
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.5e-18 94.7 85 63.5
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 4.5e-18 94.7 80 70.0
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 5.9e-18 94.4 82 65.9
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 5.9e-18 94.4 79 64.6
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 5.9e-18 94.4 79 64.6
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 7.8e-18 94.0 87 60.9
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 1.0e-17 93.6 82 65.9
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 1.0e-17 93.6 78 66.7
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 2.3e-17 92.4 76 67.1
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 2.3e-17 92.4 85 61.2
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 2.9e-17 92.0 87 60.9
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 2.9e-17 92.0 80 62.5
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 2.9e-17 92.0 72 68.1
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 3.8e-17 91.7 78 64.1
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 5.0e-17 91.3 79 67.1
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 6.6e-17 90.9 85 63.5
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 6.6e-17 90.9 78 64.1
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 8.6e-17 90.5 83 65.1
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.5e-16 89.7 90 55.6
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 1.9e-16 89.4 73 64.4
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 4.3e-16 88.2 79 62.0
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 7.3e-16 87.4 84 61.9
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 7.3e-16 87.4 87 60.9
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 9.5e-16 87.0 85 60.0
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 9.5e-16 87.0 80 62.5
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 9.5e-16 87.0 78 67.9
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 1.2e-15 86.7 87 60.9
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 2.1e-15 85.9 81 61.7
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.1e-15 85.9 79 60.8
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 2.1e-15 85.9 81 61.7
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 2.8e-15 85.5 87 59.8
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 3.6e-15 85.1 87 58.6
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 3.6e-15 85.1 76 64.5
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.6e-15 85.1 58 77.6
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 3.6e-15 85.1 79 63.3
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 3.6e-15 85.1 79 60.8
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 4.7e-15 84.7 78 64.1
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 6.1e-15 84.3 51 84.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 8.0e-15 84.0 81 60.5
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 1.0e-14 83.6 79 62.0
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.4e-14 83.2 84 61.9
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 1.4e-14 83.2 84 61.9
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 1.4e-14 83.2 43 93.0
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 1.4e-14 83.2 43 93.0
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 1.4e-14 83.2 87 57.5
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 3.0e-14 82.0 81 60.5
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 3.0e-14 82.0 74 60.8
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 5.2e-14 81.3 81 58.0
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 6.8e-14 80.9 76 61.8
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 6.8e-14 80.9 85 55.3
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.2e-13 80.1 80 56.2
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 1.5e-13 79.7 80 55.0
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 1.5e-13 79.7 76 57.9
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 2.0e-13 79.3 80 57.5
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 3.4e-13 78.6 80 56.2
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 4.4e-13 78.2 81 55.6
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 4.4e-13 78.2 83 55.4
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 4.4e-13 78.2 83 55.4
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 5.8e-13 77.8 66 62.1
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 7.5e-13 77.4 76 56.6
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 9.8e-13 77.0 73 61.6
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 1.3e-12 76.6 65 63.1
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 3.7e-12 75.1 78 55.1
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 1.1e-11 73.6 80 55.0
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 1.4e-11 73.2 67 59.7
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.4e-11 73.2 80 55.0
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 1.6e-10 69.7 82 51.2
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 5.0e-09 64.7 42 83.3
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.3e-08 62.0 42 81.0
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 3.3e-08 62.0 42 81.0


User provided reference genes

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