Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005924g0020 Nicotiana tabacum HOM05D005874 ORTHO05D007206 4.7e-194 681.0 348 100.0
CAN.G56.14 Capsicum annuum HOM05D005874 ORTHO05D007206 5.7e-139 498.0 348 75.9
Solyc08g029200.3 Solanum lycopersicum HOM05D005874 ORTHO05D007206 6.1e-133 478.0 348 73.0
Sopen08g010120 Solanum pennellii HOM05D005874 ORTHO05D007206 6.7e-132 474.6 348 72.7
GSVIVG01022009001 Vitis vinifera HOM05D005874 ORTHO05D007206 4.0e-116 422.2 349 64.2
QL03p002925 Quercus lobata HOM05D005874 ORTHO05D007206 1.7e-114 416.8 347 62.8
QL03p003516 Quercus lobata HOM05D005874 ORTHO05D007206 2.8e-114 416.0 347 62.5
MSTRG.10544 Avicennia marina HOM05D005874 ORTHO05D007206 6.3e-114 414.8 346 62.4
CSS0017417 Camellia sinensis var. sinensis HOM05D005874 ORTHO05D007206 1.1e-113 414.1 372 61.6
Hma1.2p1_0071F.1_g037960 Hydrangea macrophylla HOM05D005874 ORTHO05D007206 1.8e-113 413.3 348 62.6
CiPaw.07G012300 Carya illinoinensis HOM05D005874 ORTHO05D007206 3.1e-113 412.5 348 62.6
Migut.L01513 Erythranthe guttata HOM05D005874 ORTHO05D007206 5.4e-113 411.8 346 63.0
MELO3C014079.2 Cucumis melo HOM05D005874 ORTHO05D007206 7.0e-113 411.4 348 61.2
CsaV3_3G003940 Cucumis sativus L. HOM05D005874 ORTHO05D007206 9.2e-113 411.0 348 61.2
ECA232G3849 Erigeron canadensis HOM05D005874 ORTHO05D007206 9.2e-113 411.0 348 61.2
Actinidia05739 Actinidia chinensis HOM05D005874 ORTHO05D007206 1.6e-112 410.2 346 63.6
Actinidia30901 Actinidia chinensis HOM05D005874 ORTHO05D007206 3.5e-112 409.1 348 63.8
arahy.Tifrunner.gnm1.ann1.QVQE66 Arachis hypogaea HOM05D005874 ORTHO05D007206 2.5e-110 402.9 348 60.6
Cfa006515 Carpinus fangiana HOM05D005874 ORTHO05D007206 2.5e-110 402.9 346 60.7
Glyma.19G239400 Glycine max HOM05D005874 ORTHO05D007206 4.3e-110 402.1 346 60.7
Phvul.006G096000 Phaseolus vulgaris HOM05D005874 ORTHO05D007206 4.3e-110 402.1 344 61.0
Cc02_g32810 Coffea canephora HOM05D005874 ORTHO05D007206 5.6e-110 401.7 345 62.0
arahy.Tifrunner.gnm1.ann1.MWM6LR Arachis hypogaea HOM05D005874 ORTHO05D007206 7.3e-110 401.4 348 60.3
Dinv22927 Davidia involucrata HOM05D005874 ORTHO05D007206 7.3e-110 401.4 348 62.9
Prupe.6G333100 Prunus persica HOM05D005874 ORTHO05D007206 9.5e-110 401.0 349 59.6
TAR362G0076 Trochodendron aralioides HOM05D005874 ORTHO05D007206 6.1e-109 398.3 347 60.2
Glyma.03G242000 Glycine max HOM05D005874 ORTHO05D007206 1.8e-108 396.7 346 60.1
Sc06g0003460 Simmondsia chinensis HOM05D005874 ORTHO05D007206 1.2e-107 394.0 347 59.9
TWI36G0483 Tripterygium wilfordii HOM05D005874 ORTHO05D007206 1.5e-107 393.7 348 58.3
Psat3g009240 Pisum sativum HOM05D005874 ORTHO05D007206 3.4e-107 392.5 348 59.8
Eucgr.B02032 Eucalyptus grandis HOM05D005874 ORTHO05D007206 4.4e-107 392.1 346 58.7
HanXRQChr09g0254601 Helianthus annuus HOM05D005874 ORTHO05D007206 9.8e-107 391.0 352 59.1
Oeu052135.1 Olea europaea HOM05D005874 ORTHO05D007206 1.7e-106 390.2 348 60.1
PSO832G1738 Papaver somniferum HOM05D005874 ORTHO05D007206 1.7e-106 390.2 345 60.0
Peaxi162Scf00071g00714 Petunia axillaris HOM05D005874 ORTHO05D007206 1.7e-106 390.2 348 62.9
Medtr7g114080 Medicago truncatula HOM05D005874 ORTHO05D007206 3.7e-106 389.0 347 59.4
TPR.G21789 Trifolium pratense HOM05D005874 ORTHO05D007206 3.7e-106 389.0 348 58.0
VMungo0540G0326 Vigna mungo HOM05D005874 ORTHO05D007206 3.7e-106 389.0 332 60.5
MD12G1227400 Malus domestica HOM05D005874 ORTHO05D007206 8.3e-106 387.9 347 58.2
FvH4_6g04920 Fragaria vesca HOM05D005874 ORTHO05D007206 1.1e-105 387.5 349 57.6
Lsat_1_v5_gn_4_139320 Lactuca sativa HOM05D005874 ORTHO05D007206 1.4e-105 387.1 347 58.5
Lalb_Chr15g0077001 Lupinus albus HOM05D005874 ORTHO05D007206 1.8e-105 386.7 344 59.0
Thecc.05G296800 Theobroma cacao HOM05D005874 ORTHO05D007206 2.4e-105 386.3 349 58.7
RcHm_v2.0_Chr3g0453421 Rosa chinensis HOM05D005874 ORTHO05D007206 4.1e-105 385.6 349 57.6
FAN05G2497 Fragaria x ananassa HOM05D005874 ORTHO05D007206 5.4e-105 385.2 349 57.3
FAN05G4189 Fragaria x ananassa HOM05D005874 ORTHO05D007206 7.0e-105 384.8 349 57.3
Lj1g0003731 Lotus japonicus HOM05D005874 ORTHO05D007206 9.2e-105 384.4 346 59.2
MD04G1213200 Malus domestica HOM05D005874 ORTHO05D007206 1.6e-104 383.6 349 56.4
Rhsim07G0178000 Rhododendron simsii HOM05D005874 ORTHO05D007206 4.6e-104 382.1 348 59.8
Ciclev10001418m.g Citrus clementina HOM05D005874 ORTHO05D007206 5.9e-104 381.7 349 59.0
CANSAT54G0668 Cannabis sativa HOM05D005874 ORTHO05D007206 3.0e-103 379.4 350 58.0
Aqoxy5G00596 Aquilegia oxysepala HOM05D005874 ORTHO05D007206 3.9e-103 379.0 343 57.4
FAN09G3845 Fragaria x ananassa HOM05D005874 ORTHO05D007206 6.6e-103 378.3 349 57.0
Ah.04g159940 Amaranthus hybridus HOM05D005874 ORTHO05D007206 7.3e-102 374.8 347 57.6
Gohir.D13G178100 Gossypium hirsutum HOM05D005874 ORTHO05D007206 7.3e-102 374.8 349 56.2
Gorai.013G203400 Gossypium raimondii HOM05D005874 ORTHO05D007206 6.2e-101 371.7 349 55.9
Cpa.g.sc84.114 Carica papaya HOM05D005874 ORTHO05D007206 1.2e-99 367.5 348 57.5
FAN14G1317 Fragaria x ananassa HOM05D005874 ORTHO05D007206 1.3e-98 364.0 349 55.6
THA.LOC104818669 Tarenaya hassleriana HOM05D005874 ORTHO05D007206 1.7e-98 363.6 350 58.0
vmacro05048 Vaccinium macrocarpon HOM05D005874 ORTHO05D007206 1.7e-98 363.6 395 52.2
DCAR_001932 Daucus carota HOM05D005638 ORTHO05D006913 6.4e-98 361.7 325 58.5
Atru.chr2.537 Acer truncatum HOM05D005874 ORTHO05D007206 1.1e-97 360.9 318 58.8
HPP92_003153 Vanilla planifolia HOM05D005874 ORTHO05D007206 1.2e-96 357.5 344 52.9
Nn4g26084 Nelumbo nucifera HOM05D005874 ORTHO05D007206 2.0e-96 356.7 319 58.9
BraA09t36161Z Brassica rapa HOM05D005874 ORTHO05D007206 7.8e-96 354.8 346 54.9
BcaC04g23685 Brassica carinata HOM05D005874 ORTHO05D007206 1.0e-95 354.4 346 54.9
C09p05680 Brassica napus HOM05D005874 ORTHO05D007206 3.9e-95 352.4 346 54.6
BolC9t53497H Brassica oleracea HOM05D005874 ORTHO05D007206 3.9e-95 352.4 346 54.6
unitig_578.g16415 Utricularia gibba HOM05D005874 ORTHO05D007206 3.9e-95 352.4 331 55.9
A09p05220 Brassica napus HOM05D005874 ORTHO05D007206 5.0e-95 352.1 346 54.6
Os03g0363900 Oryza sativa ssp. japonica HOM05D005874 ORTHO05D007206 5.6e-94 348.6 345 53.6
Aa31LG5G15480 Aethionema arabicum HOM05D005874 ORTHO05D007206 2.1e-93 346.7 340 55.9
Sp2g20520 Schrenkiella parvula HOM05D005874 ORTHO05D007206 4.0e-92 342.4 348 52.3
PSO210G2121 Papaver somniferum HOM05D005874 ORTHO05D007206 8.9e-92 341.3 305 58.7
Duzib128G0205 Durio zibethinus HOM05D005874 ORTHO05D007206 5.8e-91 338.6 318 56.9
Thhalv10004370m.g Eutrema salsugineum HOM05D005874 ORTHO05D007206 6.4e-90 335.1 348 51.7
Lj9A677G37 Lonicera japonica HOM05D005874 ORTHO05D007206 8.3e-90 334.7 349 55.0
ATR0487G009 Amborella trichopoda HOM05D005874 ORTHO05D007206 1.1e-89 334.3 351 52.7
BcaC04g23688 Brassica carinata HOM05D005874 ORTHO05D007206 1.4e-89 334.0 345 52.5
CDE12G0821 Ceratophyllum demersum HOM05D005874 ORTHO05D007206 3.2e-89 332.8 343 51.3
CARHR185900 Cardamine hirsuta HOM05D005874 ORTHO05D007206 4.1e-89 332.4 348 50.3
THA.LOC104802814 Tarenaya hassleriana HOM05D005874 ORTHO05D007206 5.4e-89 332.0 346 54.0
Carub.0003s0419 Capsella rubella HOM05D005874 ORTHO05D007206 7.1e-89 331.6 346 53.8
AT3G04970 Arabidopsis thaliana HOM05D005874 ORTHO05D007206 4.6e-88 328.9 342 53.8
Thhalv10020879m.g Eutrema salsugineum HOM05D005874 ORTHO05D007206 1.0e-87 327.8 343 53.6
AL3G15310 Arabidopsis lyrata HOM05D005874 ORTHO05D007206 1.7e-87 327.0 343 53.6
COL.COLO4_13564 Corchorus olitorius HOM05D005874 ORTHO05D007206 1.7e-87 327.0 297 59.3
CARHR079280 Cardamine hirsuta HOM05D005874 ORTHO05D007206 4.3e-86 322.4 349 51.9
PGR031G1977 Punica granatum HOM05D005874 ORTHO05D007206 4.7e-85 318.9 350 50.9
BcaC05g29976 Brassica carinata HOM05D005874 ORTHO05D007206 6.2e-85 318.5 336 52.7
A05p42610 Brassica napus HOM05D005874 ORTHO05D007206 1.8e-84 317.0 345 52.8
BraA05t22992Z Brassica rapa HOM05D005874 ORTHO05D007206 3.1e-84 316.2 345 52.8
C05p62300 Brassica napus HOM05D005874 ORTHO05D007206 6.8e-84 315.1 336 52.7
BolC5t34886H Brassica oleracea HOM05D005874 ORTHO05D007206 2.6e-83 313.2 336 52.4
Sabra05G0040000 Salix brachista HOM05D005874 ORTHO05D007206 6.4e-82 308.5 423 45.9
Hund07023 Selenicereus undatus HOM05D005874 ORTHO05D007206 4.1e-81 305.8 349 48.4
BcaB04g19660 Brassica carinata HOM05D005874 ORTHO05D007206 3.5e-80 302.8 327 50.5
EL10Ac4g09284 Beta vulgaris HOM05D005874 ORTHO05D007206 7.8e-80 301.6 317 51.1
Zm00001eb394310 Zea mays HOM05D005874 ORTHO05D007206 3.9e-79 299.3 346 46.8
BcaB04g19663 Brassica carinata HOM05D005874 ORTHO05D007206 8.6e-79 298.1 346 50.3
Dinv40230 Davidia involucrata HOM05D005874 ORTHO05D007206 2.1e-77 293.5 256 61.7
SEGI_36862 Sequoiadendron giganteum HOM05D005874 ORTHO05D007206 2.1e-77 293.5 356 44.1
Gohir.A13G172200 Gossypium hirsutum HOM05D005874 ORTHO05D007206 8.1e-77 291.6 349 47.0
SGA_v2.0_scaffold21G09411 Striga asiatica HOM05D005874 ORTHO05D007206 9.3e-73 278.1 319 50.8
Aa31LG11G9040 Aethionema arabicum HOM05D005874 ORTHO05D007206 2.7e-72 276.6 256 58.6
Haze_04267 Corylus avellana HOM05D005874 ORTHO05D007206 5.6e-70 268.9 346 48.0
Sp3g03790 Schrenkiella parvula HOM05D005874 ORTHO05D007206 3.4e-67 259.6 288 50.0
AUR62000904 Chenopodium quinoa HOM05D005874 ORTHO05D007206 1.3e-61 241.1 190 64.2
Mapoly0004s0142 Marchantia polymorpha HOM05D005874 ORTHO05D007206 3.0e-55 219.9 356 35.7
Manes.08G125000 Manihot esculenta HOM05D005874 ORTHO05D007206 5.1e-55 219.2 216 55.6
Sed0024795 Sechium edule HOM05D005083 ORTHO05D006310 8.7e-55 218.4 213 54.9
Potri.005G041000 Populus trichocarpa HOM05D005874 ORTHO05D007206 5.3e-52 209.1 212 53.8
AUR62005071 Chenopodium quinoa HOM05D005874 ORTHO05D007206 2.0e-51 207.2 161 64.6
QL03p003187 Quercus lobata HOM05D005874 ORTHO05D007206 3.8e-50 203.0 290 42.4
Lj9A680G39 Lonicera japonica HOM05D005874 ORTHO05D007206 1.9e-49 200.7 213 54.9
Ca_09385_v3 Cicer arietinum L. HOM05D005874 ORTHO05D007206 1.6e-48 197.6 143 69.9
Atru.chr2.564 Acer truncatum HOM05D005874 ORTHO05D007206 4.1e-44 183.0 250 46.0
Pp3c9_17640 Physcomitrium patens HOM05D005874 ORTHO05D007206 6.5e-42 175.6 343 32.7
Duzib192G0855 Durio zibethinus HOM05D005874 ORTHO05D007206 5.5e-41 172.6 154 57.1
Duzib192G0784 Durio zibethinus HOM05D005874 ORTHO05D007206 7.2e-41 172.2 158 55.1
FAN14G2574 Fragaria x ananassa HOM05D005874 ORTHO05D007206 1.2e-40 171.4 129 65.1
Duzib192G0912 Durio zibethinus HOM05D005874 ORTHO05D007206 3.6e-40 169.9 153 56.9
SMO356G0262 Selaginella moellendorffii HOM05D005874 ORTHO05D007206 1.4e-33 147.9 256 34.8
CBR_g48996 Chara braunii HOM05D000019 ORTHO05D001702 1.1e-30 138.3 282 31.6
Duzib192G0979 Durio zibethinus HOM05D005874 ORTHO05D007206 9.7e-22 108.6 89 64.0
Nitab4.5_0000176g0140 Nicotiana tabacum HOM05D005874 ORTHO05D007206 9.7e-22 108.6 52 98.1
AagrBONN_evm.TU.Sc2ySwM_362.837 Anthoceros agrestis HOM05D005874 ORTHO05D007206 1.5e-17 94.7 165 33.3
Gorai.004G244300 Gossypium raimondii HOM05D005874 ORTHO05D007206 1.3e-13 81.6 56 71.4
Duzib177G0334 Durio zibethinus HOM05D000092 ORTHO05D000042 7.0e-12 75.9 131 36.6
Cre02.g090100 Chlamydomonas reinhardtii HOM05D005874 ORTHO05D007206 2.7e-08 63.9 267 21.0
MCO05G448 Micromonas commoda HOM05D005874 ORTHO05D007206 8.0e-08 62.4 262 24.8
PRCOL_00005730 Prasinoderma coloniale HOM05D005874 ORTHO05D007206 8.0e-08 62.4 354 24.6


User provided reference genes

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