Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005918g0020 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.3e-178 629.8 355 100.0
Nitab4.5_0000255g0240 Nicotiana tabacum HOM05D007444 ORTHO05D009359 1.3e-138 496.9 356 82.6
PGSC0003DMG400004847 Solanum tuberosum HOM05D007444 ORTHO05D009359 1.3e-101 374.0 320 74.7
Sopen06g022180 Solanum pennellii HOM05D007444 ORTHO05D009359 2.4e-100 369.8 320 73.4
CAN.G825.32 Capsicum annuum HOM05D007444 ORTHO05D009359 6.7e-95 351.7 268 72.0
Peaxi162Scf00207g00133 Petunia axillaris HOM05D007444 ORTHO05D009359 2.3e-79 300.1 194 72.7
Lj9A520T86 Lonicera japonica HOM05D007444 ORTHO05D009359 5.7e-70 268.9 271 51.7
Actinidia09035 Actinidia chinensis HOM05D007444 ORTHO05D009359 2.0e-67 260.4 256 50.0
Solyc06g062700.3 Solanum lycopersicum HOM05D007444 ORTHO05D009359 3.8e-66 256.1 156 81.4
Oeu039953.1 Olea europaea HOM05D007444 ORTHO05D009359 5.5e-65 252.3 326 48.8
CSS0030092 Camellia sinensis var. sinensis HOM05D007444 ORTHO05D009359 3.0e-63 246.5 262 50.8
vmacro17027 Vaccinium macrocarpon HOM05D007444 ORTHO05D009359 5.7e-62 242.3 258 51.2
Cc04_g01830 Coffea canephora HOM05D007444 ORTHO05D009359 3.7e-61 239.6 302 49.7
Ah.08g216430 Amaranthus hybridus HOM05D007444 ORTHO05D009359 1.0e-58 231.5 263 52.9
FAN09G3948 Fragaria x ananassa HOM05D007444 ORTHO05D009359 3.9e-58 229.6 303 46.5
FvH4_6g33680 Fragaria vesca HOM05D007444 ORTHO05D009359 6.6e-58 228.8 256 51.2
Prupe.3G047900 Prunus persica HOM05D007444 ORTHO05D009359 6.6e-58 228.8 272 47.8
Hund20831 Selenicereus undatus HOM05D007444 ORTHO05D009359 6.6e-58 228.8 275 46.2
FAN14G4700 Fragaria x ananassa HOM05D007444 ORTHO05D009359 1.9e-57 227.3 295 47.8
Migut.D00964 Erythranthe guttata HOM05D007444 ORTHO05D009359 7.3e-57 225.3 312 48.7
TAR383G0129 Trochodendron aralioides HOM05D007444 ORTHO05D009359 9.5e-57 224.9 322 42.2
DCAR_022704 Daucus carota HOM05D007444 ORTHO05D009359 1.0e-55 221.5 294 49.0
RcHm_v2.0_Chr2g0143591 Rosa chinensis HOM05D007444 ORTHO05D009359 2.3e-55 220.3 256 48.0
MD09G1191700 Malus domestica HOM05D007444 ORTHO05D009359 4.0e-55 219.5 255 44.3
Eucgr.F03140 Eucalyptus grandis HOM05D007444 ORTHO05D009359 8.9e-55 218.4 303 44.9
MSTRG.4771 Avicennia marina HOM05D007444 ORTHO05D009359 2.0e-54 217.2 302 44.4
Sed0011511 Sechium edule HOM05D007444 ORTHO05D009359 7.5e-54 215.3 303 45.9
Duzib235G0092 Durio zibethinus HOM05D007444 ORTHO05D009359 1.7e-53 214.2 267 45.3
CiPaw.02G139200 Carya illinoinensis HOM05D007444 ORTHO05D009359 2.2e-53 213.8 260 46.2
SGA_v2.0_scaffold68G22914 Striga asiatica HOM05D007444 ORTHO05D009359 3.7e-53 213.0 304 45.7
QL05p011652 Quercus lobata HOM05D007444 ORTHO05D009359 8.3e-53 211.8 276 49.3
AUR62009843 Chenopodium quinoa HOM05D007444 ORTHO05D009359 5.4e-52 209.1 277 43.0
Aqoxy7G01186 Aquilegia oxysepala HOM05D007444 ORTHO05D009359 9.2e-52 208.4 259 44.8
GSVIVG01016873001 Vitis vinifera HOM05D007444 ORTHO05D009359 1.2e-51 208.0 249 42.2
PSO017G2704 Papaver somniferum HOM05D007444 ORTHO05D009359 1.6e-51 207.6 310 45.2
Ciclev10026127m.g Citrus clementina HOM05D007444 ORTHO05D009359 2.7e-51 206.8 329 44.4
SalBow7G2527 Salvia bowleyana HOM05D007444 ORTHO05D009359 1.0e-50 204.9 295 48.1
Sc12g0010310 Simmondsia chinensis HOM05D007444 ORTHO05D009359 1.0e-50 204.9 296 46.3
Lsat_1_v5_gn_1_35640 Lactuca sativa HOM05D007444 ORTHO05D009359 3.0e-50 203.4 324 45.1
EL10Ac7g16359 Beta vulgaris HOM05D007444 ORTHO05D009359 3.9e-50 203.0 262 46.2
Haze_15975 Corylus avellana HOM05D007444 ORTHO05D009359 8.6e-50 201.8 309 45.6
QL05p011272 Quercus lobata HOM05D007444 ORTHO05D009359 8.6e-50 201.8 276 46.7
Ca_01210_v3 Cicer arietinum L. HOM05D007444 ORTHO05D009359 1.5e-49 201.1 274 41.2
Psat5g292040 Pisum sativum HOM05D007444 ORTHO05D009359 2.5e-49 200.3 264 40.9
Medtr2g099820 Medicago truncatula HOM05D007444 ORTHO05D009359 9.5e-49 198.4 250 44.0
PSO478G1587 Papaver somniferum HOM05D007444 ORTHO05D009359 1.2e-48 198.0 315 46.7
TPR.G6573 Trifolium pratense HOM05D007444 ORTHO05D009359 2.8e-48 196.8 259 43.2
Gohir.D06G198800 Gossypium hirsutum HOM05D007444 ORTHO05D009359 8.1e-48 195.3 261 46.4
Glyma.15G024900 Glycine max HOM05D007444 ORTHO05D009359 8.9e-47 191.8 266 41.7
Phvul.005G158200 Phaseolus vulgaris HOM05D007444 ORTHO05D009359 1.2e-46 191.4 260 42.7
AL3G25850 Arabidopsis lyrata HOM05D007444 ORTHO05D009359 1.5e-46 191.0 301 40.5
AUR62038156 Chenopodium quinoa HOM05D007444 ORTHO05D009359 1.5e-46 191.0 187 50.3
THA.LOC104815643 Tarenaya hassleriana HOM05D007444 ORTHO05D009359 2.6e-46 190.3 309 40.8
Aa31LG8G960 Aethionema arabicum HOM05D007444 ORTHO05D009359 7.5e-46 188.7 242 45.0
Gorai.010G231700 Gossypium raimondii HOM05D007444 ORTHO05D009359 7.5e-46 188.7 261 45.2
Manes.11G025100 Manihot esculenta HOM05D007444 ORTHO05D009359 1.7e-45 187.6 261 46.0
Lalb_Chr14g0372751 Lupinus albus HOM05D007444 ORTHO05D009359 1.9e-44 184.1 281 39.5
AT3G13780 Arabidopsis thaliana HOM05D007444 ORTHO05D009359 1.6e-43 181.0 253 45.1
Dinv37906 Davidia involucrata HOM05D007444 ORTHO05D009359 2.7e-43 180.3 162 56.2
Sp3g11980 Schrenkiella parvula HOM05D007444 ORTHO05D009359 6.0e-43 179.1 307 44.0
Gohir.A06G190400 Gossypium hirsutum HOM05D007444 ORTHO05D009359 1.0e-42 178.3 266 43.2
TWI36G0277 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.0e-42 178.3 265 45.3
TWI36G1725 Tripterygium wilfordii HOM05D007444 ORTHO05D009359 1.0e-42 178.3 265 45.3
Cfa003571 Carpinus fangiana HOM05D007444 ORTHO05D009359 1.7e-42 177.6 299 42.5
Carub.0003s1330 Capsella rubella HOM05D007444 ORTHO05D009359 6.6e-42 175.6 254 46.5
CsaV3_3G043760 Cucumis sativus L. HOM05D007444 ORTHO05D009359 1.1e-41 174.9 302 39.1
BcaB06g25436 Brassica carinata HOM05D007444 ORTHO05D009359 1.9e-41 174.1 307 42.3
CARHR088510 Cardamine hirsuta HOM05D007444 ORTHO05D009359 1.9e-41 174.1 255 45.5
ClCG07G013830 Citrullus lanatus HOM05D007444 ORTHO05D009359 3.3e-41 173.3 320 38.1
C05p54050 Brassica napus HOM05D007444 ORTHO05D009359 5.6e-41 172.6 309 46.0
BolC5t34070H Brassica oleracea HOM05D007444 ORTHO05D009359 5.6e-41 172.6 309 46.0
COL.COLO4_30661 Corchorus olitorius HOM05D007444 ORTHO05D009359 7.3e-41 172.2 200 42.5
Potri.001G196700 Populus trichocarpa HOM05D007444 ORTHO05D009359 3.6e-40 169.9 306 37.3
BraA05t22371Z Brassica rapa HOM05D007444 ORTHO05D009359 1.1e-39 168.3 294 41.8
MELO3C013088.2 Cucumis melo HOM05D007444 ORTHO05D009359 1.1e-39 168.3 302 42.1
CANSAT56G0761 Cannabis sativa HOM05D007444 ORTHO05D009359 1.5e-38 164.5 273 42.9
QL05p010974 Quercus lobata HOM05D007444 ORTHO05D009359 1.5e-38 164.5 200 45.0
A05p35640 Brassica napus HOM05D007444 ORTHO05D009359 2.0e-38 164.1 188 44.1
Thhalv10021210m.g Eutrema salsugineum HOM05D007444 ORTHO05D009359 2.6e-38 163.7 305 41.6
CDE05G3416 Ceratophyllum demersum HOM05D007444 ORTHO05D009359 8.3e-37 158.7 308 35.1
Lj3g0023369 Lotus japonicus HOM05D007444 ORTHO05D009359 4.1e-36 156.4 276 36.6
Sabra01G0143200 Salix brachista HOM05D007444 ORTHO05D009359 7.1e-36 155.6 232 40.9
arahy.Tifrunner.gnm1.ann1.F397YD Arachis hypogaea HOM05D007444 ORTHO05D009359 3.5e-35 153.3 278 41.4
MBI01_g20340_MAGBIO Magnolia biondii HOM05D007444 ORTHO05D009359 7.8e-35 152.1 317 34.4
arahy.Tifrunner.gnm1.ann1.ZV36U3 Arachis hypogaea HOM05D007444 ORTHO05D009359 1.3e-34 151.4 278 41.7
HanXRQChr02g0031731 Helianthus annuus HOM05D007444 ORTHO05D009359 1.3e-34 151.4 295 42.0
PGR119G0376 Punica granatum HOM05D007444 ORTHO05D009359 5.1e-34 149.4 271 39.9
Rhsim12G0206600 Rhododendron simsii HOM05D007444 ORTHO05D009359 3.6e-32 143.3 159 49.1
HPP92_005228 Vanilla planifolia HOM05D007444 ORTHO05D009359 1.1e-28 131.7 326 32.2
Hma1.2p1_0496F.1_g165930 Hydrangea macrophylla HOM05D007444 ORTHO05D009359 1.5e-25 121.3 104 54.8
Zm00001eb277400 Zea mays HOM05D007444 ORTHO05D009359 1.5e-22 111.3 335 32.2
Cpa.g.sc25.50 Carica papaya HOM05D007444 ORTHO05D009359 9.9e-22 108.6 195 34.9
ECA247G2926 Erigeron canadensis HOM05D000045 ORTHO05D000067 3.2e-20 103.6 222 44.1
SEGI_13370 Sequoiadendron giganteum HOM05D007444 ORTHO05D009359 2.4e-15 87.4 241 29.9
ATR0109G024 Amborella trichopoda HOM05D007444 ORTHO05D009359 1.9e-12 77.8 135 35.6
Pp3c14_13390 Physcomitrium patens HOM05D007444 ORTHO05D009359 1.8e-10 71.2 112 34.8
QL05p011362 Quercus lobata HOM05D007444 ORTHO05D009359 1.5e-09 68.2 98 55.1
Os06g0565300 Oryza sativa ssp. japonica HOM05D007444 ORTHO05D009359 1.4e-07 61.6 78 43.6


User provided reference genes

Program Settings