Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005918g0010 Nicotiana tabacum HOM05D006233 ORTHO05D007247 7.2e-78 293.9 154 100.0
Nitab4.5_0000255g0250 Nicotiana tabacum HOM05D006233 ORTHO05D007247 1.5e-70 269.6 145 97.9
Sopen06g022210 Solanum pennellii HOM05D006233 ORTHO05D007247 1.2e-61 240.0 145 89.0
PGSC0003DMG400004851 Solanum tuberosum HOM05D006233 ORTHO05D007247 3.0e-60 235.3 145 86.9
Solyc06g062760.3 Solanum lycopersicum HOM05D006233 ORTHO05D007247 1.2e-59 233.4 146 87.0
Peaxi162Scf00207g01343 Petunia axillaris HOM05D006233 ORTHO05D007247 1.4e-57 226.5 147 83.7
Cc04_g01780 Coffea canephora HOM05D006233 ORTHO05D007247 3.5e-40 168.7 146 67.8
Dinv04018 Davidia involucrata HOM05D006233 ORTHO05D007247 3.5e-40 168.7 143 66.4
MSTRG.9502 Avicennia marina HOM05D006233 ORTHO05D007247 3.9e-39 165.2 150 64.0
Thecc.06G113700 Theobroma cacao HOM05D006233 ORTHO05D007247 5.1e-39 164.9 147 68.0
Cpa.g.sc25.68 Carica papaya HOM05D006233 ORTHO05D007247 1.1e-38 163.7 148 64.2
Dinv37902 Davidia involucrata HOM05D006233 ORTHO05D007247 1.2e-37 160.2 140 65.7
MD17G1173900 Malus domestica HOM05D006233 ORTHO05D007247 2.1e-37 159.5 145 62.1
Migut.D00962 Erythranthe guttata HOM05D006233 ORTHO05D007247 4.7e-37 158.3 159 59.7
SGA_v2.0_scaffold4G02044 Striga asiatica HOM05D006233 ORTHO05D007247 4.7e-37 158.3 149 63.1
TWI63G1789 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 8.1e-37 157.5 145 64.8
Gohir.A06G191200 Gossypium hirsutum HOM05D006233 ORTHO05D007247 5.2e-36 154.8 146 65.8
Actinidia26050 Actinidia chinensis HOM05D006233 ORTHO05D007247 6.8e-36 154.5 146 61.0
Prupe.3G047000 Prunus persica HOM05D006233 ORTHO05D007247 6.8e-36 154.5 148 61.5
COL.COLO4_38606 Corchorus olitorius HOM05D006233 ORTHO05D007247 1.5e-35 153.3 145 65.5
MD09G1191200 Malus domestica HOM05D006233 ORTHO05D007247 2.0e-35 152.9 146 61.0
Atru.chr1.3781 Acer truncatum HOM05D006233 ORTHO05D007247 2.6e-35 152.5 142 64.1
CANSAT56G1839 Cannabis sativa HOM05D006233 ORTHO05D007247 2.6e-35 152.5 148 60.8
Actinidia39105 Actinidia chinensis HOM05D006233 ORTHO05D007247 3.4e-35 152.1 149 60.4
Gohir.D06G199600 Gossypium hirsutum HOM05D006233 ORTHO05D007247 5.8e-35 151.4 145 63.4
Gorai.010G232600 Gossypium raimondii HOM05D006233 ORTHO05D007247 7.6e-35 151.0 145 63.4
HanXRQChr10g0312401 Helianthus annuus HOM05D006233 ORTHO05D007247 1.7e-34 149.8 147 61.9
FAN05G2224 Fragaria x ananassa HOM05D006233 ORTHO05D007247 2.9e-34 149.1 148 57.4
Lj5A43T71 Lonicera japonica HOM05D006233 ORTHO05D007247 4.9e-34 148.3 159 60.4
Manes.11G024800 Manihot esculenta HOM05D006233 ORTHO05D007247 4.9e-34 148.3 147 61.9
TWI38G0279 Tripterygium wilfordii HOM05D006233 ORTHO05D007247 4.9e-34 148.3 145 62.1
FvH4_6g33800 Fragaria vesca HOM05D006233 ORTHO05D007247 1.1e-33 147.1 148 56.8
FAN14G4045 Fragaria x ananassa HOM05D006233 ORTHO05D007247 1.1e-33 147.1 148 56.8
Cfa003566 Carpinus fangiana HOM05D006233 ORTHO05D007247 2.4e-33 146.0 149 60.4
arahy.Tifrunner.gnm1.ann1.LDN3BT Arachis hypogaea HOM05D006233 ORTHO05D007247 3.2e-33 145.6 141 57.4
FAN09G3309 Fragaria x ananassa HOM05D006233 ORTHO05D007247 7.1e-33 144.4 148 56.1
Manes.04G140700 Manihot esculenta HOM05D006233 ORTHO05D007247 9.2e-33 144.1 147 59.2
CiPaw.02G138900 Carya illinoinensis HOM05D006233 ORTHO05D007247 1.6e-32 143.3 147 61.2
Eucgr.F03142 Eucalyptus grandis HOM05D006233 ORTHO05D007247 1.6e-32 143.3 146 61.0
RcHm_v2.0_Chr2g0143671 Rosa chinensis HOM05D006233 ORTHO05D007247 2.7e-32 142.5 148 57.4
Nn6g35511 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.0e-31 140.6 145 58.6
AL3G26050 Arabidopsis lyrata HOM05D006233 ORTHO05D007247 1.7e-31 139.8 149 55.7
Hma1.2p1_1128F.1_g259780 Hydrangea macrophylla HOM05D006233 ORTHO05D007247 1.7e-31 139.8 150 57.3
ECA234G2580 Erigeron canadensis HOM05D006233 ORTHO05D007247 3.0e-31 139.0 152 57.9
CiPaw.01G223500 Carya illinoinensis HOM05D006233 ORTHO05D007247 3.9e-31 138.7 152 57.9
GSVIVG01016799001 Vitis vinifera HOM05D006233 ORTHO05D007247 3.9e-31 138.7 149 58.4
AT3G13882 Arabidopsis thaliana HOM05D006233 ORTHO05D007247 6.6e-31 137.9 149 55.0
Aa31LG8G1060 Aethionema arabicum HOM05D006233 ORTHO05D007247 1.1e-30 137.1 154 54.5
Aqoxy7G01184 Aquilegia oxysepala HOM05D006233 ORTHO05D007247 1.1e-30 137.1 146 55.5
Haze_15979 Corylus avellana HOM05D006233 ORTHO05D007247 1.5e-30 136.7 171 51.5
Medtr8g017420 Medicago truncatula HOM05D006233 ORTHO05D007247 1.5e-30 136.7 142 56.3
Carub.0003s1344 Capsella rubella HOM05D006233 ORTHO05D007247 2.5e-30 136.0 149 54.4
Ca_23330_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 2.5e-30 136.0 143 57.3
PSO210G1065 Papaver somniferum HOM05D006233 ORTHO05D007247 3.3e-30 135.6 146 55.5
CsaV3_3G043640 Cucumis sativus L. HOM05D006233 ORTHO05D007247 4.3e-30 135.2 159 54.7
Ciclev10026736m.g Citrus clementina HOM05D006233 ORTHO05D007247 5.6e-30 134.8 144 58.3
PSO210G5036 Papaver somniferum HOM05D006233 ORTHO05D007247 5.6e-30 134.8 142 54.9
MELO3C013069.2 Cucumis melo HOM05D006233 ORTHO05D007247 9.6e-30 134.0 148 56.1
Sed0001061 Sechium edule HOM05D006233 ORTHO05D007247 1.6e-29 133.3 157 56.1
BcaB06g25428 Brassica carinata HOM05D006233 ORTHO05D007247 2.8e-29 132.5 149 54.4
CARHR088680 Cardamine hirsuta HOM05D006233 ORTHO05D007247 2.8e-29 132.5 150 53.3
Sp3g12110 Schrenkiella parvula HOM05D006233 ORTHO05D007247 2.8e-29 132.5 149 52.3
BcaB04g18809 Brassica carinata HOM05D006233 ORTHO05D007247 3.6e-29 132.1 148 53.4
Potri.003G041100 Populus trichocarpa HOM05D006233 ORTHO05D007247 4.7e-29 131.7 143 57.3
Hund20828 Selenicereus undatus HOM05D006233 ORTHO05D007247 6.2e-29 131.3 168 50.6
BcaC05g29149 Brassica carinata HOM05D006233 ORTHO05D007247 2.4e-28 129.4 153 52.3
C05p53920 Brassica napus HOM05D006233 ORTHO05D007247 2.4e-28 129.4 153 52.3
Lj5A42T58 Lonicera japonica HOM05D006233 ORTHO05D007247 2.4e-28 129.4 98 72.4
Thhalv10021711m.g Eutrema salsugineum HOM05D006233 ORTHO05D007247 3.1e-28 129.0 149 54.4
A03p38490 Brassica napus HOM05D006233 ORTHO05D007247 4.0e-28 128.6 149 53.0
BolC3t16928H Brassica oleracea HOM05D006233 ORTHO05D007247 4.0e-28 128.6 149 53.0
CDE03G0127 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 6.8e-28 127.9 143 52.4
C03p46650 Brassica napus HOM05D006233 ORTHO05D007247 1.2e-27 127.1 149 52.3
Phvul.010G137600 Phaseolus vulgaris HOM05D006233 ORTHO05D007247 1.2e-27 127.1 142 56.3
Psat4g187760 Pisum sativum HOM05D006233 ORTHO05D007247 1.2e-27 127.1 134 55.2
TPR.G3185 Trifolium pratense HOM05D006233 ORTHO05D007247 1.2e-27 127.1 143 55.2
Lalb_Chr25g0280771 Lupinus albus HOM05D006233 ORTHO05D007247 1.5e-27 126.7 142 55.6
MBI04_g36913_MAGBIO Magnolia biondii HOM05D006233 ORTHO05D007247 1.5e-27 126.7 144 54.2
BcaC01g03969 Brassica carinata HOM05D006233 ORTHO05D007247 2.0e-27 126.3 149 52.3
ClCG07G013950 Citrullus lanatus HOM05D006233 ORTHO05D007247 2.0e-27 126.3 153 54.2
PGR119G1625 Punica granatum HOM05D006233 ORTHO05D007247 3.4e-27 125.6 150 52.7
AUR62009846 Chenopodium quinoa HOM05D006233 ORTHO05D007247 4.4e-27 125.2 156 49.4
EL10Ac7g16362 Beta vulgaris HOM05D006233 ORTHO05D007247 5.8e-27 124.8 162 48.1
HanXRQChr04g0094941 Helianthus annuus HOM05D006233 ORTHO05D007247 7.6e-27 124.4 143 56.6
Lj5g0016703 Lotus japonicus HOM05D006233 ORTHO05D007247 9.9e-27 124.0 150 52.0
Actinidia32155 Actinidia chinensis HOM05D006233 ORTHO05D007247 1.3e-26 123.6 155 53.5
VMungo0331G0931 Vigna mungo HOM05D006233 ORTHO05D007247 1.3e-26 123.6 142 56.3
AUR62038159 Chenopodium quinoa HOM05D006233 ORTHO05D007247 3.8e-26 122.1 161 46.6
BraA03t12999Z Brassica rapa HOM05D006233 ORTHO05D007247 6.4e-26 121.3 153 52.3
BraA03t13001Z Brassica rapa HOM05D006233 ORTHO05D007247 6.4e-26 121.3 150 52.0
THA.LOC104822640 Tarenaya hassleriana HOM05D006233 ORTHO05D007247 6.4e-26 121.3 174 48.9
Duzib192G0098 Durio zibethinus HOM05D006233 ORTHO05D007247 5.4e-25 118.2 124 57.3
Glyma.08G191600 Glycine max HOM05D006233 ORTHO05D007247 2.1e-24 116.3 137 54.7
Lsat_1_v5_gn_5_135041 Lactuca sativa HOM05D006233 ORTHO05D007247 6.0e-24 114.8 119 56.3
Glyma.07G008600 Glycine max HOM05D006233 ORTHO05D007247 1.3e-23 113.6 138 55.8
Rhsim08G0234900 Rhododendron simsii HOM05D006233 ORTHO05D007247 3.0e-23 112.5 129 48.1
SGA_v2.0_scaffold68G22913 Striga asiatica HOM05D006233 ORTHO05D007247 3.9e-23 112.1 125 53.6
FAN21G3416 Fragaria x ananassa HOM05D006233 ORTHO05D007247 3.3e-22 109.0 126 50.0
BolC5t34058H Brassica oleracea HOM05D006233 ORTHO05D007247 4.3e-22 108.6 155 45.8
arahy.Tifrunner.gnm1.ann1.9P6A99 Arachis hypogaea HOM05D006233 ORTHO05D007247 7.3e-22 107.8 117 48.7
Nn8g38812 Nelumbo nucifera HOM05D006233 ORTHO05D007247 1.3e-21 107.1 131 51.1
Zm00001eb160070 Zea mays HOM05D006233 ORTHO05D007247 2.4e-20 102.8 146 46.6
unitig_8.g4463 Utricularia gibba HOM05D006233 ORTHO05D007247 1.5e-19 100.1 120 50.0
ATR0789G010 Amborella trichopoda HOM05D006233 ORTHO05D007247 2.0e-19 99.8 78 66.7
Os01g0571200 Oryza sativa ssp. japonica HOM05D006233 ORTHO05D007247 2.6e-19 99.4 150 47.3
FAN11G2894 Fragaria x ananassa HOM05D000283 ORTHO05D007247 1.1e-17 94.0 111 48.6
CDE06G1672 Ceratophyllum demersum HOM05D006233 ORTHO05D007247 7.3e-14 81.3 122 43.4
A03p38520 Brassica napus HOM05D006233 ORTHO05D007247 9.6e-14 80.9 125 44.0
BraA05t22362Z Brassica rapa HOM05D006233 ORTHO05D007247 3.6e-13 79.0 177 38.4
QL05p010144 Quercus lobata HOM05D006233 ORTHO05D007247 6.9e-12 74.7 151 38.4
BcaC05g29150 Brassica carinata HOM05D006233 ORTHO05D007247 9.0e-12 74.3 142 44.4
CSS0050466 Camellia sinensis var. sinensis HOM05D006233 ORTHO05D007247 1.2e-11 73.9 98 43.9
HPP92_007656 Vanilla planifolia HOM05D006233 ORTHO05D007247 1.5e-11 73.6 120 39.2
Pp3c4_29560 Physcomitrium patens HOM05D006233 ORTHO05D007247 4.5e-11 72.0 76 53.9
AagrBONN_evm.TU.Sc2ySwM_368.223 Anthoceros agrestis HOM05D003143 ORTHO05D003628 5.8e-11 71.6 56 62.5
Mapoly0016s0011 Marchantia polymorpha HOM05D006233 ORTHO05D007247 1.3e-10 70.5 74 55.4
QL05p010226 Quercus lobata HOM05D006233 ORTHO05D007247 2.9e-10 69.3 92 52.2
Zm00001eb357240 Zea mays HOM05D006233 ORTHO05D007247 3.8e-10 68.9 126 38.9
Nn1g01194 Nelumbo nucifera HOM05D006233 ORTHO05D007247 2.4e-09 66.2 49 71.4
vmacro18776 Vaccinium macrocarpon HOM05D006233 ORTHO05D007247 3.5e-08 62.4 93 41.9
MCO16G417 Micromonas commoda HOM05D003208 ORTHO05D004103 7.9e-08 61.2 107 41.1
Ca_29232_v3 Cicer arietinum L. HOM05D006233 ORTHO05D007247 1.3e-07 60.5 42 71.4
SalBow7G1471 Salvia bowleyana HOM05D006233 ORTHO05D007247 1.8e-07 60.1 92 41.3
CBR_g8600 Chara braunii HOM05D006233 ORTHO05D007247 5.1e-07 58.5 42 66.7
CAN.G1407.1 Capsicum annuum HOM05D004684 ORTHO05D016153 2.5e-06 56.2 33 78.8
RcHm_v2.0_Chr5g0063721 Rosa chinensis HOM05D006233 ORTHO05D007247 2.5e-06 56.2 88 40.9
Sed0004594 Sechium edule HOM05D006233 ORTHO05D007247 5.6e-06 55.1 93 44.1
A05p35530 Brassica napus HOM05D006233 ORTHO05D007247 7.4e-06 54.7 96 37.5
CSS0050070 Camellia sinensis var. sinensis HOM05D041584 ORTHO05D007247 9.6e-06 54.3 30 86.7
Oeu011882.1 Olea europaea HOM05D006233 ORTHO05D007247 9.6e-06 54.3 95 42.1


User provided reference genes

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