Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.6e-59 231.9 121 100.0
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 2.3e-15 85.9 76 63.2
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.8e-15 84.3 53 84.9
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 2.0e-14 82.8 84 60.7
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 2.0e-14 82.8 82 58.5
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 4.4e-14 81.6 85 57.6
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 1.3e-13 80.1 53 81.1
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.7e-13 78.6 90 57.8
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.2e-12 75.5 83 51.8
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.6e-11 73.2 84 54.8
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 3.5e-11 72.0 80 56.2
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.1e-09 67.0 75 60.0
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 1.5e-09 66.6 59 61.0
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 1.9e-09 66.2 93 45.2
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 2.5e-09 65.9 81 55.6
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.5e-09 65.9 92 44.6
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 2.5e-09 65.9 64 60.9
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.5e-09 65.9 52 65.4
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 3.3e-09 65.5 76 50.0
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.3e-09 65.5 84 54.8
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.6e-09 64.7 80 53.8
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 5.6e-09 64.7 80 53.8
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 7.3e-09 64.3 57 64.9
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 7.3e-09 64.3 56 58.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 2.1e-08 62.8 74 52.7
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 2.8e-08 62.4 93 48.4
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 2.8e-08 62.4 62 53.2
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 3.6e-08 62.0 85 48.2
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 4.7e-08 61.6 74 43.2
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 6.2e-08 61.2 86 50.0
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 8.1e-08 60.8 90 43.3
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 8.1e-08 60.8 90 45.6
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 1.4e-07 60.1 56 57.1
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 3.1e-07 58.9 53 50.9
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 3.1e-07 58.9 52 65.4
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.1e-07 58.9 79 51.9
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 3.1e-07 58.9 74 48.6
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 3.1e-07 58.9 79 51.9
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 4.0e-07 58.5 51 60.8
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 4.0e-07 58.5 87 44.8
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 5.2e-07 58.2 91 47.3
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 5.2e-07 58.2 50 62.0
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 5.2e-07 58.2 50 62.0
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 5.2e-07 58.2 50 62.0
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 5.2e-07 58.2 81 45.7
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 5.2e-07 58.2 52 57.7
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 5.2e-07 58.2 41 78.0
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 6.8e-07 57.8 102 42.2
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 6.8e-07 57.8 88 45.5
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 6.8e-07 57.8 50 62.0
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 6.8e-07 57.8 88 43.2
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 8.9e-07 57.4 90 42.2
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 8.9e-07 57.4 74 47.3
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 1.2e-06 57.0 87 44.8
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.5e-06 56.6 85 45.9
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 1.5e-06 56.6 90 42.2
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.0e-06 56.2 53 60.4
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.6e-06 55.8 50 60.0
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 2.6e-06 55.8 82 47.6
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 2.6e-06 55.8 50 60.0
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 3.4e-06 55.5 55 50.9
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 3.4e-06 55.5 84 45.2
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 3.4e-06 55.5 84 45.2
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 3.4e-06 55.5 81 45.7
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 4.4e-06 55.1 76 47.4
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 5.8e-06 54.7 53 47.2
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 5.8e-06 54.7 98 41.8
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 7.6e-06 54.3 46 65.2
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 9.9e-06 53.9 61 55.7
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 9.9e-06 53.9 50 62.0


User provided reference genes

Program Settings