Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005910g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 5.1e-69 264.2 128 100.0
Nitab4.5_0010535g0020 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.9e-63 245.7 128 93.8
Peaxi162Scf00166g00046 Petunia axillaris HOM05D005465 ORTHO05D006612 4.5e-57 224.6 129 83.7
PGSC0003DMG400001360 Solanum tuberosum HOM05D005465 ORTHO05D006612 2.2e-56 222.2 128 82.8
Sopen02g033620 Solanum pennellii HOM05D005465 ORTHO05D006612 2.9e-56 221.9 128 82.0
Solyc02g088930.4 Solanum lycopersicum HOM05D005465 ORTHO05D006612 1.6e-54 216.1 125 80.8
Nitab4.5_0000212g0270 Nicotiana tabacum HOM05D005465 ORTHO05D006612 1.0e-53 213.4 128 80.5
PGSC0003DMG400026569 Solanum tuberosum HOM05D005465 ORTHO05D006612 3.0e-53 211.8 128 78.1
PGSC0003DMG400035500 Solanum tuberosum HOM05D005465 ORTHO05D006612 4.3e-52 208.0 123 80.5
Solyc10g082064.1 Solanum lycopersicum HOM05D005465 ORTHO05D006612 9.6e-52 206.8 128 75.8
Peaxi162Scf00991g00013 Petunia axillaris HOM05D005465 ORTHO05D006612 4.8e-51 204.5 128 75.8
Actinidia26253 Actinidia chinensis HOM05D005465 ORTHO05D006612 8.2e-51 203.8 128 75.0
Nitab4.5_0008370g0030 Nicotiana tabacum HOM05D005465 ORTHO05D006612 8.2e-51 203.8 123 79.7
SGA_v2.0_scaffold4G02379 Striga asiatica HOM05D005465 ORTHO05D006612 2.4e-50 202.2 128 75.8
CSS0002198 Camellia sinensis var. sinensis HOM05D005465 ORTHO05D006612 7.6e-49 197.2 128 71.1
SGA_v2.0_scaffold52G19131 Striga asiatica HOM05D005465 ORTHO05D006612 6.5e-48 194.1 128 71.9
COL.COLO4_24335 Corchorus olitorius HOM05D005465 ORTHO05D006612 8.4e-48 193.7 127 71.7
PGR044G0931 Punica granatum HOM05D005465 ORTHO05D006612 7.1e-47 190.7 128 71.9
Hma1.2p1_0481F.1_g162260 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.1e-46 189.1 125 72.8
Hma1.2p1_0481F.1_g162270 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 2.1e-46 189.1 125 72.8
Nn4g23446 Nelumbo nucifera HOM05D005465 ORTHO05D006612 2.1e-46 189.1 128 73.4
Duzib205G0879 Durio zibethinus HOM05D005465 ORTHO05D006612 3.5e-46 188.3 127 70.1
Nn3g17466 Nelumbo nucifera HOM05D005465 ORTHO05D006612 3.5e-46 188.3 127 71.7
ClCG04G011730 Citrullus lanatus HOM05D005465 ORTHO05D006612 1.0e-45 186.8 128 71.9
Thecc.03G103400 Theobroma cacao HOM05D005465 ORTHO05D006612 1.0e-45 186.8 123 72.4
Duzib084G0509 Durio zibethinus HOM05D005465 ORTHO05D006612 2.3e-45 185.7 129 71.3
Prupe.5G206300 Prunus persica HOM05D005465 ORTHO05D006612 3.0e-45 185.3 128 69.5
Manes.06G083500 Manihot esculenta HOM05D005465 ORTHO05D006612 5.1e-45 184.5 122 73.8
Gohir.D03G097000 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.1e-44 183.3 127 69.3
Gorai.003G101800 Gossypium raimondii HOM05D005465 ORTHO05D006612 1.1e-44 183.3 127 69.3
MELO3C002037.2 Cucumis melo HOM05D005465 ORTHO05D006612 1.5e-44 183.0 128 69.5
Migut.H00618 Erythranthe guttata HOM05D005465 ORTHO05D006612 1.5e-44 183.0 128 69.5
Gohir.A03G070600 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.5e-44 183.0 127 69.3
Rhsim08G0075200 Rhododendron simsii HOM05D005465 ORTHO05D006612 1.5e-44 183.0 124 69.4
unitig_899.g15102 Utricularia gibba HOM05D005465 ORTHO05D006612 5.7e-44 181.0 121 69.4
CsaV3_1G006060 Cucumis sativus L. HOM05D005465 ORTHO05D006612 7.4e-44 180.6 128 68.8
ECA232G0503 Erigeron canadensis HOM05D005465 ORTHO05D006612 7.4e-44 180.6 128 69.5
Gorai.006G268200 Gossypium raimondii HOM05D005465 ORTHO05D006612 7.4e-44 180.6 127 69.3
Lsat_1_v5_gn_4_171900 Lactuca sativa HOM05D005465 ORTHO05D006612 2.8e-43 178.7 128 68.8
DCAR_011037 Daucus carota HOM05D005465 ORTHO05D006612 3.7e-43 178.3 125 68.0
Cfa019348 Carpinus fangiana HOM05D005465 ORTHO05D006612 6.3e-43 177.6 126 68.3
Ah.10g032300 Amaranthus hybridus HOM05D005465 ORTHO05D006612 8.2e-43 177.2 126 68.3
TAR622G0582 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.1e-42 176.8 125 65.6
PSO782G3842 Papaver somniferum HOM05D005465 ORTHO05D006612 1.4e-42 176.4 126 69.8
Cc07_g04290 Coffea canephora HOM05D005465 ORTHO05D006612 3.1e-42 175.3 126 67.5
Sed0023287 Sechium edule HOM05D005465 ORTHO05D006612 4.1e-42 174.9 128 66.4
Haze_07739 Corylus avellana HOM05D005465 ORTHO05D006612 5.3e-42 174.5 126 66.7
Aqoxy3G03677 Aquilegia oxysepala HOM05D005465 ORTHO05D006612 9.0e-42 173.7 126 63.5
arahy.Tifrunner.gnm1.ann1.13IMLW Arachis hypogaea HOM05D005465 ORTHO05D006612 1.2e-41 173.3 126 67.5
Ciclev10022497m.g Citrus clementina HOM05D005465 ORTHO05D006612 1.5e-41 172.9 126 64.3
PSO063G4354 Papaver somniferum HOM05D005465 ORTHO05D006612 1.5e-41 172.9 126 68.3
TAR371G0638 Trochodendron aralioides HOM05D005465 ORTHO05D006612 2.0e-41 172.6 125 66.4
Sc14g0006350 Simmondsia chinensis HOM05D005465 ORTHO05D006612 3.4e-41 171.8 120 65.8
Atru.chr9.555 Acer truncatum HOM05D005465 ORTHO05D006612 4.5e-41 171.4 125 65.6
Lj4g0014841 Lotus japonicus HOM05D005465 ORTHO05D006612 4.5e-41 171.4 125 65.6
CiPaw.11G054700 Carya illinoinensis HOM05D005465 ORTHO05D006612 7.7e-41 170.6 126 66.7
Carub.0006s0695 Capsella rubella HOM05D005465 ORTHO05D006612 1.0e-40 170.2 127 62.2
VMungo1215G2862 Vigna mungo HOM05D005465 ORTHO05D006612 1.0e-40 170.2 124 66.1
AUR62018194 Chenopodium quinoa HOM05D005465 ORTHO05D006612 2.2e-40 169.1 126 65.9
Rhsim10G0048500 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.2e-40 169.1 128 62.5
AUR62038681 Chenopodium quinoa HOM05D005465 ORTHO05D006612 2.9e-40 168.7 126 65.1
Rhsim10G0047800 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.9e-40 168.7 128 62.5
TWI81G0357 Tripterygium wilfordii HOM05D005465 ORTHO05D006612 2.9e-40 168.7 128 63.3
AL6G18430 Arabidopsis lyrata HOM05D005465 ORTHO05D006612 3.8e-40 168.3 128 60.2
THA.LOC104801135 Tarenaya hassleriana HOM05D005465 ORTHO05D006612 6.5e-40 167.5 125 64.0
AT5G08060 Arabidopsis thaliana HOM05D005465 ORTHO05D006612 8.5e-40 167.2 128 59.4
QL10p019840 Quercus lobata HOM05D005465 ORTHO05D006612 8.5e-40 167.2 121 64.5
EL10Ac2g03144 Beta vulgaris HOM05D005465 ORTHO05D006612 1.4e-39 166.4 127 63.8
TPR.G2036 Trifolium pratense HOM05D005465 ORTHO05D006612 1.4e-39 166.4 128 61.7
MD06G1226100 Malus domestica HOM05D005465 ORTHO05D006612 2.5e-39 165.6 122 64.8
Glyma.17G079700 Glycine max HOM05D005465 ORTHO05D006612 4.2e-39 164.9 124 63.7
BcaB01g05639 Brassica carinata HOM05D005465 ORTHO05D006612 5.5e-39 164.5 126 60.3
Glyma.05G020100 Glycine max HOM05D005465 ORTHO05D006612 5.5e-39 164.5 124 64.5
Lalb_Chr13g0302801 Lupinus albus HOM05D005465 ORTHO05D006612 5.5e-39 164.5 124 65.3
BcaB08g37294 Brassica carinata HOM05D005465 ORTHO05D006612 9.4e-39 163.7 125 59.2
A10p28580 Brassica napus HOM05D005465 ORTHO05D006612 9.4e-39 163.7 125 59.2
C09p68870 Brassica napus HOM05D005465 ORTHO05D006612 9.4e-39 163.7 125 59.2
BolC9t59633H Brassica oleracea HOM05D005465 ORTHO05D006612 9.4e-39 163.7 125 59.2
Eucgr.K02534 Eucalyptus grandis HOM05D005465 ORTHO05D006612 9.4e-39 163.7 121 62.8
RcHm_v2.0_Chr7g0183221 Rosa chinensis HOM05D005465 ORTHO05D006612 1.2e-38 163.3 125 64.0
Medtr4g109650 Medicago truncatula HOM05D005465 ORTHO05D006612 1.6e-38 162.9 128 61.7
BraA10t44907Z Brassica rapa HOM05D005465 ORTHO05D006612 2.7e-38 162.2 125 58.4
Cpa.g.sc746.2 Carica papaya HOM05D005465 ORTHO05D006612 2.7e-38 162.2 126 62.7
FvH4_5g13720 Fragaria vesca HOM05D005465 ORTHO05D006612 2.7e-38 162.2 128 62.5
CARHR205120 Cardamine hirsuta HOM05D005465 ORTHO05D006612 6.1e-38 161.0 126 58.7
FAN18G4042 Fragaria x ananassa HOM05D005465 ORTHO05D006612 6.1e-38 161.0 125 62.4
Phvul.003G183800 Phaseolus vulgaris HOM05D005465 ORTHO05D006612 6.1e-38 161.0 124 62.9
Psat4g047600 Pisum sativum HOM05D005465 ORTHO05D006612 7.9e-38 160.6 128 60.9
Os01g0763300 Oryza sativa ssp. japonica HOM05D005465 ORTHO05D006612 1.0e-37 160.2 129 58.9
Sp6g34890 Schrenkiella parvula HOM05D005465 ORTHO05D006612 1.0e-37 160.2 126 58.7
MD14G1213000 Malus domestica HOM05D005465 ORTHO05D006612 1.4e-37 159.8 122 61.5
Potri.004G123700 Populus trichocarpa HOM05D005465 ORTHO05D006612 1.4e-37 159.8 126 60.3
Zm00001eb370380 Zea mays HOM05D005465 ORTHO05D006612 1.4e-37 159.8 130 57.7
Thhalv10015010m.g Eutrema salsugineum HOM05D005465 ORTHO05D006612 1.8e-37 159.5 126 58.7
FAN13G0353 Fragaria x ananassa HOM05D005465 ORTHO05D006612 1.8e-37 159.5 125 62.4
DCAR_025436 Daucus carota HOM05D005465 ORTHO05D006612 2.3e-37 159.1 126 61.9
Oeu062167.1 Olea europaea HOM05D005465 ORTHO05D006612 3.0e-37 158.7 128 62.5
MBI16_g10835_MAGBIO Magnolia biondii HOM05D005465 ORTHO05D006612 3.9e-37 158.3 123 61.8
Zm00001eb152340 Zea mays HOM05D005465 ORTHO05D006612 5.1e-37 157.9 128 58.6
Aa31LG3G18480 Aethionema arabicum HOM05D005465 ORTHO05D006612 6.7e-37 157.5 124 59.7
Ca_21764_v3 Cicer arietinum L. HOM05D005465 ORTHO05D006612 8.8e-37 157.1 128 60.2
Gohir.D09G244200 Gossypium hirsutum HOM05D005465 ORTHO05D006612 2.0e-36 156.0 127 63.0
Dinv34936 Davidia involucrata HOM05D005465 ORTHO05D006612 2.5e-36 155.6 104 71.2
A03p03570 Brassica napus HOM05D005465 ORTHO05D006612 3.3e-36 155.2 126 58.7
BraA03t09707Z Brassica rapa HOM05D005465 ORTHO05D006612 3.3e-36 155.2 126 58.7
BraA02t04941Z Brassica rapa HOM05D005465 ORTHO05D006612 1.7e-35 152.9 125 57.6
Sabra04G0090300 Salix brachista HOM05D005465 ORTHO05D006612 6.3e-35 151.0 120 60.8
BolC3t12939H Brassica oleracea HOM05D005465 ORTHO05D006612 8.2e-35 150.6 126 56.3
SHI17457 Sapria himalayana HOM05D005465 ORTHO05D006612 1.4e-34 149.8 125 57.6
Sopen02g016050 Solanum pennellii HOM05D005465 ORTHO05D006612 5.3e-34 147.9 128 57.0
Rhsim10G0050100 Rhododendron simsii HOM05D005465 ORTHO05D006612 2.6e-33 145.6 128 55.5
EL10Ac5g11896 Beta vulgaris HOM05D005465 ORTHO05D006612 7.9e-30 134.0 97 68.0
Rhsim10G0048300 Rhododendron simsii HOM05D005465 ORTHO05D006612 7.9e-30 134.0 128 53.9
BcaB05g21584 Brassica carinata HOM05D005465 ORTHO05D006612 8.8e-29 130.6 127 49.6
Sopen10g012570 Solanum pennellii HOM05D005465 ORTHO05D006612 1.5e-28 129.8 128 52.3
Hma1.2p1_0029F.1_g018040 Hydrangea macrophylla HOM05D005465 ORTHO05D006612 3.3e-28 128.6 80 73.8
Sopen10g022010 Solanum pennellii HOM05D005465 ORTHO05D006612 4.4e-28 128.3 128 53.9
Sopen10g006060 Solanum pennellii HOM05D005465 ORTHO05D006612 1.3e-27 126.7 128 52.3
CDE02G4042 Ceratophyllum demersum HOM05D005465 ORTHO05D006612 4.8e-27 124.8 93 63.4
BcaB08g37291 Brassica carinata HOM05D005465 ORTHO05D006612 8.5e-24 114.0 81 61.7
Gohir.A09G243500 Gossypium hirsutum HOM05D005465 ORTHO05D006612 1.9e-23 112.8 77 66.2
Actinidia17587 Actinidia chinensis HOM05D005465 ORTHO05D006612 5.2e-21 104.8 67 70.1
SEGI_31914 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 2.8e-19 99.0 121 46.3
SMO263G0026 Selaginella moellendorffii HOM05D005465 ORTHO05D006612 1.6e-17 93.2 127 37.0
Mapoly0019s0055 Marchantia polymorpha HOM05D005465 ORTHO05D006612 3.8e-16 88.6 126 39.7
SEGI_27681 Sequoiadendron giganteum HOM05D005465 ORTHO05D006612 7.2e-15 84.3 130 38.5
BcaB01g05638 Brassica carinata HOM05D005465 ORTHO05D006612 1.6e-14 83.2 73 54.8
Peaxi162Scf00991g00114 Petunia axillaris HOM05D005465 ORTHO05D006612 1.6e-14 83.2 125 40.8
FAN08G0639 Fragaria x ananassa HOM05D005465 ORTHO05D006612 3.6e-14 82.0 66 54.5
TAR622G1303 Trochodendron aralioides HOM05D005465 ORTHO05D006612 1.4e-13 80.1 97 43.3
Lsat_1_v5_gn_4_50580 Lactuca sativa HOM05D005465 ORTHO05D006612 6.8e-13 77.8 49 75.5
EL10Ac5g12104 Beta vulgaris HOM05D005465 ORTHO05D006612 1.5e-12 76.6 70 50.0
Pp3c16_5680 Physcomitrium patens HOM05D005465 ORTHO05D006612 4.4e-12 75.1 131 35.9
AagrBONN_evm.TU.Sc2ySwM_362.2833 Anthoceros agrestis HOM05D005465 ORTHO05D006612 1.7e-11 73.2 129 35.7
CBR_g37656 Chara braunii HOM05D005465 ORTHO05D006612 5.4e-10 68.2 100 37.0
Cre12.g484700 Chlamydomonas reinhardtii HOM05D005465 ORTHO05D006612 2.7e-09 65.9 96 38.5
PRCOL_00003291 Prasinoderma coloniale HOM05D005465 ORTHO05D006612 1.9e-07 59.7 69 47.8
SGA_v2.0_scaffold187G40263 Striga asiatica HOM05D005465 ORTHO05D006612 1.9e-07 59.7 103 37.9
MCO16G501 Micromonas commoda HOM05D005465 ORTHO05D006612 7.2e-07 57.8 62 37.1


User provided reference genes

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