Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005900g0050 Nicotiana tabacum HOM05D003665 ORTHO05D004387 3.1e-309 1064.3 541 100.0
Nitab4.5_0001211g0250 Nicotiana tabacum HOM05D003665 ORTHO05D004387 7.0e-277 956.8 553 89.3
Solyc03g115810.3 Solanum lycopersicum HOM05D003665 ORTHO05D004387 9.2e-229 797.0 620 71.0
Sopen03g034790 Solanum pennellii HOM05D003665 ORTHO05D004387 7.8e-228 793.9 620 70.8
Peaxi162Scf00274g00347 Petunia axillaris HOM05D003665 ORTHO05D004387 3.3e-210 735.3 625 67.2
CSS0007464 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 9.7e-178 627.5 637 58.1
GSVIVG01025191001 Vitis vinifera HOM05D003665 ORTHO05D004387 9.7e-178 627.5 628 58.6
Dinv09884 Davidia involucrata HOM05D003665 ORTHO05D004387 1.7e-174 616.7 582 61.0
Cc00_g12880 Coffea canephora HOM05D003665 ORTHO05D004387 2.9e-174 615.9 601 60.2
Nitab4.5_0001195g0040 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.9e-174 615.9 605 59.3
CSS0036787 Camellia sinensis var. sinensis HOM05D003665 ORTHO05D004387 3.8e-174 615.5 607 59.1
TAR623G1097 Trochodendron aralioides HOM05D003665 ORTHO05D004387 1.1e-173 614.0 646 56.3
Nitab4.5_0001997g0130 Nicotiana tabacum HOM05D003665 ORTHO05D004387 2.5e-173 612.8 612 58.2
vmacro03198 Vaccinium macrocarpon HOM05D003665 ORTHO05D004387 7.2e-173 611.3 622 57.9
Hma1.2p1_0058F.1_g032480 Hydrangea macrophylla HOM05D003665 ORTHO05D004387 9.4e-173 610.9 602 58.8
MD11G1136600 Malus domestica HOM05D003665 ORTHO05D004387 1.2e-172 610.5 592 58.8
MSTRG.18661 Avicennia marina HOM05D003665 ORTHO05D004387 7.9e-172 607.8 613 56.8
Nn2g12882 Nelumbo nucifera HOM05D003665 ORTHO05D004387 1.0e-171 607.4 557 62.3
Actinidia24103 Actinidia chinensis HOM05D003665 ORTHO05D004387 1.4e-171 607.1 581 60.4
TWI31G1339 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 2.6e-170 602.8 601 57.1
CiPaw.13G113600 Carya illinoinensis HOM05D003665 ORTHO05D004387 1.8e-168 596.7 634 55.0
QL01p022122 Quercus lobata HOM05D003665 ORTHO05D004387 4.1e-168 595.5 677 53.9
RcHm_v2.0_Chr5g0058821 Rosa chinensis HOM05D003665 ORTHO05D004387 6.9e-168 594.7 593 57.7
FAN25G3303 Fragaria x ananassa HOM05D003665 ORTHO05D004387 9.1e-168 594.3 619 55.9
Cfa011312 Carpinus fangiana HOM05D003665 ORTHO05D004387 1.2e-167 594.0 604 56.8
MBI05_g08786_MAGBIO Magnolia biondii HOM05D003665 ORTHO05D004387 1.2e-167 594.0 617 56.6
Duzib170G0108 Durio zibethinus HOM05D003665 ORTHO05D004387 3.8e-166 589.0 589 58.9
Sed0022671 Sechium edule HOM05D003665 ORTHO05D004387 6.5e-166 588.2 576 57.6
Migut.D02227 Erythranthe guttata HOM05D003665 ORTHO05D004387 1.1e-165 587.4 634 53.9
Gohir.A05G103400 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.9e-165 586.6 557 60.5
FAN21G1776 Fragaria x ananassa HOM05D003665 ORTHO05D004387 3.2e-165 585.9 602 56.6
SGA_v2.0_scaffold97G29239 Striga asiatica HOM05D003665 ORTHO05D004387 3.2e-165 585.9 613 55.6
Eucgr.B02502 Eucalyptus grandis HOM05D003665 ORTHO05D004387 5.5e-165 585.1 532 60.3
Gorai.009G107400 Gossypium raimondii HOM05D003665 ORTHO05D004387 7.2e-165 584.7 563 59.5
CiPaw.14G080900 Carya illinoinensis HOM05D003665 ORTHO05D004387 9.4e-165 584.3 624 54.6
FvH4_3g32210 Fragaria vesca HOM05D003665 ORTHO05D004387 9.4e-165 584.3 618 55.2
FAN11G0686 Fragaria x ananassa HOM05D003665 ORTHO05D004387 1.2e-164 583.9 606 55.9
Gohir.A03G033500 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.2e-164 583.9 603 57.5
SalBow3G4611 Salvia bowleyana HOM05D003665 ORTHO05D004387 2.7e-164 582.8 617 55.9
Gohir.D05G103100 Gossypium hirsutum HOM05D003665 ORTHO05D004387 3.6e-164 582.4 563 59.5
Gorai.003G141900 Gossypium raimondii HOM05D003665 ORTHO05D004387 3.6e-164 582.4 603 57.5
ClCG01G013730 Citrullus lanatus HOM05D003665 ORTHO05D004387 4.7e-164 582.0 626 54.0
SGA_v2.0_scaffold61G21127 Striga asiatica HOM05D003665 ORTHO05D004387 4.7e-164 582.0 645 54.6
FAN16G1206 Fragaria x ananassa HOM05D003665 ORTHO05D004387 6.1e-164 581.6 598 56.2
Prupe.6G102100 Prunus persica HOM05D003665 ORTHO05D004387 5.2e-163 578.6 477 64.4
Potri.009G014400 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.1e-162 577.4 570 58.1
Thecc.09G341400 Theobroma cacao HOM05D003665 ORTHO05D004387 1.1e-162 577.4 472 65.5
CANSAT54G1114 Cannabis sativa HOM05D003665 ORTHO05D004387 3.3e-162 575.9 534 59.6
Aqoxy4G03025 Aquilegia oxysepala HOM05D003665 ORTHO05D004387 2.2e-161 573.2 578 58.0
Ciclev10028088m.g Citrus clementina HOM05D003665 ORTHO05D004387 2.2e-161 573.2 575 57.9
Gohir.D03G134800 Gossypium hirsutum HOM05D003665 ORTHO05D004387 2.2e-161 573.2 603 57.0
Manes.11G145800 Manihot esculenta HOM05D003665 ORTHO05D004387 2.2e-161 573.2 606 55.6
Atru.chr3.3622 Acer truncatum HOM05D003665 ORTHO05D004387 1.8e-160 570.1 511 61.6
Haze_23819 Corylus avellana HOM05D003665 ORTHO05D004387 5.3e-160 568.5 630 53.7
COL.COLO4_18330 Corchorus olitorius HOM05D003665 ORTHO05D004387 7.0e-160 568.2 446 67.7
MELO3C004874.2 Cucumis melo HOM05D003665 ORTHO05D004387 3.5e-159 565.8 621 53.6
Cpa.g.sc216.2 Carica papaya HOM05D003665 ORTHO05D004387 4.5e-159 565.5 578 56.4
Duzib168G1080 Durio zibethinus HOM05D003665 ORTHO05D004387 7.7e-159 564.7 590 56.4
Sabra09G0007600 Salix brachista HOM05D003665 ORTHO05D004387 7.7e-159 564.7 664 51.8
MD03G1118200 Malus domestica HOM05D003665 ORTHO05D004387 1.7e-158 563.5 607 54.9
Potri.004G211200 Populus trichocarpa HOM05D003665 ORTHO05D004387 1.7e-158 563.5 598 54.7
TAR369G0153 Trochodendron aralioides HOM05D003665 ORTHO05D004387 3.8e-158 562.4 558 57.3
Phvul.005G134800 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 2.5e-157 559.7 531 59.9
CsaV3_1G014040 Cucumis sativus L. HOM05D003665 ORTHO05D004387 3.2e-157 559.3 625 53.0
HanXRQChr01g0019371 Helianthus annuus HOM05D003665 ORTHO05D004387 2.1e-156 556.6 611 54.7
Phvul.011G079600 Phaseolus vulgaris HOM05D003665 ORTHO05D004387 2.7e-156 556.2 504 60.1
Glyma.13G325700 Glycine max HOM05D003665 ORTHO05D004387 1.0e-155 554.3 529 59.5
Gorai.004G229200 Gossypium raimondii HOM05D003665 ORTHO05D004387 1.0e-155 554.3 606 54.8
VMungo1127G1530 Vigna mungo HOM05D003665 ORTHO05D004387 1.4e-155 553.9 504 59.3
Gohir.A08G198200 Gossypium hirsutum HOM05D003665 ORTHO05D004387 1.8e-155 553.5 613 55.0
PSO384G0045 Papaver somniferum HOM05D003665 ORTHO05D004387 2.3e-155 553.1 522 60.3
Lj3g0004290 Lotus japonicus HOM05D003665 ORTHO05D004387 4.0e-155 552.4 525 58.7
PGR119G2069 Punica granatum HOM05D003665 ORTHO05D004387 6.7e-155 551.6 525 58.9
Glyma.12G172200 Glycine max HOM05D003665 ORTHO05D004387 1.2e-154 550.8 511 60.3
Medtr4g059000 Medicago truncatula HOM05D003665 ORTHO05D004387 3.3e-154 549.3 548 55.7
Actinidia07137 Actinidia chinensis HOM05D003665 ORTHO05D004387 4.4e-154 548.9 554 58.7
PSO339G3164 Papaver somniferum HOM05D003665 ORTHO05D004387 4.4e-154 548.9 522 60.5
Oeu030188.3 Olea europaea HOM05D003665 ORTHO05D004387 4.8e-153 545.4 678 50.9
Ca_19262_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.4e-152 543.9 476 60.7
ATR0033G036 Amborella trichopoda HOM05D003665 ORTHO05D004387 2.4e-152 543.1 585 54.2
VMungo1080G0406 Vigna mungo HOM05D003665 ORTHO05D004387 2.7e-151 539.7 520 59.0
Dinv32740 Davidia involucrata HOM05D003665 ORTHO05D004387 4.5e-151 538.9 634 52.4
EL10Ac2g02422 Beta vulgaris HOM05D003665 ORTHO05D004387 1.0e-150 537.7 638 51.6
BcaC01g04965 Brassica carinata HOM05D003665 ORTHO05D004387 3.8e-150 535.8 582 53.1
ECA238G1380 Erigeron canadensis HOM05D003665 ORTHO05D004387 5.0e-150 535.4 598 52.2
TPR.G11547 Trifolium pratense HOM05D003665 ORTHO05D004387 6.5e-150 535.0 512 59.0
ECA248G0778 Erigeron canadensis HOM05D003665 ORTHO05D004387 1.5e-149 533.9 610 53.8
Medtr2g094470 Medicago truncatula HOM05D003665 ORTHO05D004387 4.2e-149 532.3 520 58.7
THA.LOC104826364 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 9.4e-149 531.2 613 51.9
AT2G28390 Arabidopsis thaliana HOM05D003665 ORTHO05D004387 1.6e-148 530.4 597 52.4
Psat5g278960 Pisum sativum HOM05D003665 ORTHO05D004387 3.6e-148 529.3 511 58.1
THA.LOC104815747 Tarenaya hassleriana HOM05D003665 ORTHO05D004387 6.1e-148 528.5 621 49.4
BolC3t15507H Brassica oleracea HOM05D003665 ORTHO05D004387 1.4e-147 527.3 593 52.1
AL4G21640 Arabidopsis lyrata HOM05D003665 ORTHO05D004387 3.0e-147 526.2 602 52.7
Sp4g11190 Schrenkiella parvula HOM05D003665 ORTHO05D004387 4.0e-147 525.8 600 51.3
TWI79G0002 Tripterygium wilfordii HOM05D003665 ORTHO05D004387 1.5e-146 523.9 343 76.4
Lalb_Chr22g0350251 Lupinus albus HOM05D003665 ORTHO05D004387 9.8e-146 521.2 551 55.0
Psat0s134g0040 Pisum sativum HOM05D003665 ORTHO05D004387 9.8e-146 521.2 506 57.3
Carub.0004s0931 Capsella rubella HOM05D003665 ORTHO05D004387 3.7e-145 519.2 589 51.8
Thhalv10016386m.g Eutrema salsugineum HOM05D003665 ORTHO05D004387 4.8e-145 518.8 605 50.6
Actinidia12926 Actinidia chinensis HOM05D003665 ORTHO05D004387 6.3e-145 518.5 318 81.8
CARHR121340 Cardamine hirsuta HOM05D003665 ORTHO05D004387 1.4e-144 517.3 591 50.9
C03p31650 Brassica napus HOM05D003665 ORTHO05D004387 4.1e-144 515.8 590 51.4
Lalb_Chr19g0137231 Lupinus albus HOM05D003665 ORTHO05D004387 4.1e-144 515.8 464 59.7
A03p26380 Brassica napus HOM05D003665 ORTHO05D004387 9.1e-144 514.6 591 51.4
BraA03t11853Z Brassica rapa HOM05D003665 ORTHO05D004387 9.1e-144 514.6 595 51.3
BcaB01g03101 Brassica carinata HOM05D003665 ORTHO05D004387 1.2e-143 514.2 602 51.0
Lsat_1_v5_gn_1_64201 Lactuca sativa HOM05D003665 ORTHO05D004387 3.5e-143 512.7 613 52.0
Lj3g0015527 Lotus japonicus HOM05D003665 ORTHO05D004387 5.9e-143 511.9 499 58.1
Hund03712 Selenicereus undatus HOM05D003665 ORTHO05D004387 2.9e-142 509.6 343 75.5
Lalb_Chr24g0394651 Lupinus albus HOM05D003665 ORTHO05D004387 8.6e-142 508.1 547 54.1
arahy.Tifrunner.gnm1.ann1.567MYZ Arachis hypogaea HOM05D003665 ORTHO05D004387 2.5e-141 506.5 479 58.5
DCAR_006064 Daucus carota HOM05D003665 ORTHO05D004387 2.5e-141 506.5 595 53.1
SEGI_12034 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.2e-140 504.2 506 55.5
Lsat_1_v5_gn_2_100120 Lactuca sativa HOM05D003665 ORTHO05D004387 3.6e-140 502.7 619 51.2
BcaB06g25420 Brassica carinata HOM05D003665 ORTHO05D004387 2.3e-139 500.0 589 50.3
HanXRQChr14g0452781 Helianthus annuus HOM05D003665 ORTHO05D004387 8.8e-139 498.0 612 50.5
C04p23090 Brassica napus HOM05D003665 ORTHO05D004387 9.8e-138 494.6 604 49.8
Lj2C1027G11 Lonicera japonica HOM05D003665 ORTHO05D004387 1.7e-137 493.8 573 52.9
BolC4t23802H Brassica oleracea HOM05D003665 ORTHO05D004387 2.8e-137 493.0 606 48.5
Aa31LG5G7830 Aethionema arabicum HOM05D003665 ORTHO05D004387 3.7e-137 492.7 612 50.2
BraA07t29601Z Brassica rapa HOM05D003665 ORTHO05D004387 3.7e-137 492.7 497 55.9
A07p18960 Brassica napus HOM05D003665 ORTHO05D004387 6.3e-137 491.9 594 49.8
arahy.Tifrunner.gnm1.ann1.B5LWM3 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.4e-136 490.7 464 58.4
Actinidia13994 Actinidia chinensis HOM05D003665 ORTHO05D004387 5.4e-136 488.8 324 76.9
arahy.Tifrunner.gnm1.ann1.IYQC31 Arachis hypogaea HOM05D003665 ORTHO05D004387 1.6e-135 487.3 527 53.9
Sc06g0010260 Simmondsia chinensis HOM05D003665 ORTHO05D004387 1.0e-134 484.6 522 54.4
arahy.Tifrunner.gnm1.ann1.RTB9TW Arachis hypogaea HOM05D003665 ORTHO05D004387 8.6e-134 481.5 525 53.3
Os01g0976000 Oryza sativa ssp. japonica HOM05D003665 ORTHO05D004387 2.1e-132 476.9 582 49.1
Ca_01409_v3 Cicer arietinum L. HOM05D003665 ORTHO05D004387 1.0e-131 474.6 474 57.6
Sabra04G0142700 Salix brachista HOM05D003665 ORTHO05D004387 2.4e-128 463.4 370 66.8
PGR102G1414 Punica granatum HOM05D003665 ORTHO05D004387 3.5e-127 459.5 574 49.3
Gohir.D08G215600 Gossypium hirsutum HOM05D003665 ORTHO05D004387 9.8e-122 441.4 540 52.0
SEGI_16973 Sequoiadendron giganteum HOM05D003665 ORTHO05D004387 1.9e-120 437.2 446 52.0
CDE08G0353 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 1.2e-116 424.5 305 70.5
Ah.12g061180 Amaranthus hybridus HOM05D003665 ORTHO05D004387 8.1e-116 421.8 318 67.9
HPP92_006598 Vanilla planifolia HOM05D003665 ORTHO05D004387 1.2e-114 417.9 596 46.6
Mapoly0115s0070 Marchantia polymorpha HOM05D003665 ORTHO05D004387 1.7e-113 414.1 605 43.8
Zm00001eb139700 Zea mays HOM05D003665 ORTHO05D004387 5.1e-110 402.5 322 63.0
AUR62037705 Chenopodium quinoa HOM05D003665 ORTHO05D004387 6.6e-110 402.1 627 43.1
SMO356G0046 Selaginella moellendorffii HOM05D003665 ORTHO05D004387 2.1e-108 397.1 597 42.5
PGSC0003DMG400019504 Solanum tuberosum HOM05D003665 ORTHO05D004387 1.1e-107 394.8 394 62.4
Peaxi162Scf00106g00431 Petunia axillaris HOM05D003665 ORTHO05D004387 8.9e-107 391.7 456 50.4
AagrBONN_evm.TU.Sc2ySwM_228.3586 Anthoceros agrestis HOM05D003665 ORTHO05D004387 1.1e-101 374.8 558 43.5
AUR62020295 Chenopodium quinoa HOM05D003665 ORTHO05D004387 1.4e-99 367.9 525 44.8
Pp3c3_30360 Physcomitrium patens HOM05D003665 ORTHO05D004387 1.5e-98 364.4 621 40.3
unitig_899.g14918 Utricularia gibba HOM05D003665 ORTHO05D004387 2.0e-98 364.0 581 44.4
CAN.G479.67 Capsicum annuum HOM05D003665 ORTHO05D004387 2.6e-98 363.6 356 61.5
AagrBONN_evm.TU.Sc2ySwM_117.1231 Anthoceros agrestis HOM05D003665 ORTHO05D004387 2.9e-97 360.1 495 42.8
Pp3c10_13820 Physcomitrium patens HOM05D003665 ORTHO05D004387 7.8e-95 352.1 485 45.2
Atru.chr3.3619 Acer truncatum HOM05D003665 ORTHO05D004387 8.7e-86 322.0 231 67.1
CDE02G0373 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 3.7e-76 290.0 212 67.9
CAN.G479.68 Capsicum annuum HOM05D000222 ORTHO05D004387 1.0e-73 282.0 153 88.2
TPR.G35439 Trifolium pratense HOM05D003665 ORTHO05D004387 2.4e-51 207.6 144 70.1
BcaB06g25423 Brassica carinata HOM05D003665 ORTHO05D004387 3.1e-43 180.6 398 37.2
SHI09320 Sapria himalayana HOM05D003665 ORTHO05D004387 2.3e-38 164.5 183 49.2
Lsat_1_v5_gn_8_29480 Lactuca sativa HOM05D003665 ORTHO05D004387 8.2e-36 156.0 116 75.0
arahy.Tifrunner.gnm1.ann1.3H693L Arachis hypogaea HOM05D003665 ORTHO05D004387 1.9e-32 144.8 115 63.5
CDE02G1163 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 4.1e-27 127.1 292 36.3
CBR_g29308 Chara braunii HOM05D000019 ORTHO05D000002 1.0e-25 122.5 256 32.8
Lsat_1_v5_gn_6_45780 Lactuca sativa HOM05D003665 ORTHO05D004387 3.3e-24 117.5 87 72.4
Lsat_1_v5_gn_6_39960 Lactuca sativa HOM05D003665 ORTHO05D004387 9.5e-24 115.9 76 80.3
Cre03.g154500 Chlamydomonas reinhardtii HOM05D003665 ORTHO05D004387 1.2e-23 115.5 176 38.6
Lsat_1_v5_gn_8_31621 Lactuca sativa HOM05D003665 ORTHO05D004387 4.0e-22 110.5 76 76.3
Lsat_1_v5_gn_6_80301 Lactuca sativa HOM05D003665 ORTHO05D004387 1.5e-21 108.6 76 76.3
SHI09317 Sapria himalayana HOM05D003665 ORTHO05D004387 7.5e-21 106.3 78 70.5
CDE08G1291 Ceratophyllum demersum HOM05D003665 ORTHO05D004387 2.2e-20 104.8 318 32.7
MCO05G084 Micromonas commoda HOM05D003665 ORTHO05D004387 2.8e-20 104.4 521 23.4
BolC4t27275H Brassica oleracea HOM05D003665 ORTHO05D004387 1.5e-16 92.0 130 40.0
VMungo0225G0001 Vigna mungo HOM05D003665 ORTHO05D004387 1.4e-14 85.5 68 69.1
Cfa025752 Carpinus fangiana HOM05D003665 ORTHO05D004387 3.0e-14 84.3 580 21.6
Duzib235G1059 Durio zibethinus HOM05D003665 ORTHO05D004387 2.2e-12 78.2 148 41.9
Glyma.11G146000 Glycine max HOM05D003665 ORTHO05D004387 8.3e-12 76.3 99 49.5
Duzib084G1104 Durio zibethinus HOM05D003665 ORTHO05D004387 2.7e-10 71.2 70 51.4
TPR.G15544 Trifolium pratense HOM05D003665 ORTHO05D004387 2.7e-10 71.2 45 71.1
HanXRQChr06g0179151 Helianthus annuus HOM05D003665 ORTHO05D004387 3.9e-09 67.4 37 86.5
Oeu002465.1 Olea europaea HOM05D003665 ORTHO05D289337 6.6e-09 66.6 195 35.4
HanXRQChr04g0103101 Helianthus annuus HOM05D003665 ORTHO05D004387 3.3e-08 64.3 32 84.4
SHI09315 Sapria himalayana HOM05D003665 ORTHO05D004387 1.6e-07 62.0 87 44.8
Actinidia13995 Actinidia chinensis HOM05D003665 ORTHO05D004387 6.8e-06 56.6 29 79.3
Lsat_1_v5_gn_9_20280 Lactuca sativa HOM05D005041 ORTHO05D002973 6.8e-06 56.6 38 76.3


User provided reference genes

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