Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 5.7e-234 813.9 421 100.0
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.2e-214 748.8 450 88.0
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 9.4e-205 716.8 422 88.9
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 2.3e-203 712.2 422 88.4
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 1.7e-198 696.0 422 87.0
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 4.0e-187 658.3 436 81.4
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 8.3e-177 624.0 421 78.9
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 1.6e-140 503.4 419 66.8
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 8.1e-140 501.1 335 75.5
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 3.1e-139 499.2 416 63.7
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 4.0e-139 498.8 342 75.4
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 1.1e-136 490.7 418 65.1
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 1.3e-134 483.8 426 63.4
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 6.7e-134 481.5 417 63.1
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 1.5e-133 480.3 421 62.0
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 2.5e-133 479.6 420 63.1
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 9.6e-133 477.6 418 62.2
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 3.7e-132 475.7 335 72.8
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 4.8e-132 475.3 420 61.9
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 1.8e-131 473.4 424 61.3
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 4.0e-131 472.2 419 63.5
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 6.0e-127 458.4 426 59.6
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 6.7e-126 454.9 418 60.8
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 2.5e-125 453.0 418 60.5
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 2.5e-125 453.0 417 60.9
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 4.3e-125 452.2 417 58.5
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 2.2e-124 449.9 416 57.9
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 2.4e-123 446.4 418 59.3
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 2.4e-123 446.4 421 59.9
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.3e-123 445.3 418 59.8
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 5.3e-123 445.3 419 60.1
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 1.2e-122 444.1 423 58.4
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 5.9e-122 441.8 419 56.1
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.0e-121 441.0 412 61.7
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 1.9e-120 436.8 414 57.7
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 2.5e-120 436.4 423 57.2
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 7.2e-120 434.9 480 54.8
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 9.3e-120 434.5 418 58.4
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 1.6e-119 433.7 391 60.4
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 1.8e-118 430.3 419 57.8
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.1e-117 427.6 391 57.5
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 1.5e-117 427.2 391 58.1
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 2.5e-117 426.4 420 55.0
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 1.7e-116 423.7 421 57.7
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 2.2e-116 423.3 425 59.3
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 4.8e-116 422.2 391 58.6
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.3e-116 421.8 389 59.4
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 8.2e-116 421.4 415 58.6
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 4.1e-115 419.1 422 58.1
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.2e-114 417.5 417 54.4
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 4.5e-114 415.6 372 59.1
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 5.9e-114 415.2 429 58.0
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 1.7e-113 413.7 463 51.8
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 3.2e-112 409.5 420 57.1
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 5.5e-112 408.7 371 58.5
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 1.2e-111 407.5 415 55.9
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 1.6e-111 407.1 417 54.9
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 1.0e-110 404.4 345 60.3
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 3.9e-110 402.5 423 57.2
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 1.1e-109 401.0 313 62.9
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 2.0e-109 400.2 345 60.6
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 2.6e-109 399.8 415 53.7
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 3.3e-109 399.4 254 79.1
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 4.4e-109 399.1 418 55.3
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 2.0e-106 390.2 416 52.9
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 2.9e-105 386.3 425 55.1
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 3.8e-105 386.0 433 52.4
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 2.5e-104 383.3 414 54.6
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 3.2e-104 382.9 420 51.4
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 7.2e-104 381.7 425 52.7
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 4.7e-103 379.0 414 51.0
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.4e-102 377.5 349 57.6
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 3.9e-102 375.9 373 57.4
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 5.2e-102 375.6 333 61.9
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 8.8e-102 374.8 435 51.3
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 1.1e-101 374.4 418 52.4
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 1.2e-98 364.4 423 50.6
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 5.9e-98 362.1 420 51.4
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 1.0e-97 361.3 421 51.3
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 2.2e-97 360.1 420 51.4
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 3.8e-97 359.4 422 50.9
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 8.5e-97 358.2 422 50.7
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 3.2e-96 356.3 372 54.3
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.2e-95 354.4 418 50.0
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 1.0e-94 351.3 428 50.0
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 4.0e-94 349.4 391 51.4
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 5.7e-93 345.5 385 50.4
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 6.3e-92 342.0 422 48.3
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 1.6e-90 337.4 345 55.7
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 3.2e-88 329.7 423 50.8
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 2.7e-87 326.6 419 49.6
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 5.9e-82 308.9 437 44.9
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 1.0e-81 308.1 241 64.3
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 6.6e-81 305.4 313 50.5
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 2.1e-79 300.4 336 50.9
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 6.8e-78 295.4 191 76.4
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 9.8e-77 291.6 421 46.3
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.7e-71 272.7 220 62.7
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 7.5e-61 238.8 167 67.7
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 9.8e-61 238.4 311 46.3
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 5.8e-53 212.6 405 35.6
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 2.9e-52 210.3 327 39.8
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 1.5e-48 198.0 428 32.2
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 1.6e-42 177.9 111 75.7
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.9e-41 173.3 111 73.0
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.7e-39 166.4 152 58.6
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 2.0e-37 161.0 129 65.1
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 5.8e-37 159.5 133 63.2
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.6e-37 159.1 129 61.2
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 8.4e-36 155.6 195 50.3
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 1.5e-32 144.8 185 51.4
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 2.2e-28 131.0 129 54.3
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 2.9e-28 130.6 209 41.1
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 3.2e-27 127.1 198 35.9
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 1.6e-23 114.8 171 45.6
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.3e-22 109.8 77 63.6
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 2.6e-21 107.5 219 32.4
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 4.9e-20 103.2 69 68.1
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.2e-19 100.5 61 73.8
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 3.5e-18 97.1 81 58.0
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.0e-17 95.5 152 44.7
Cre07.g351400 Chlamydomonas reinhardtii HOM05D006199 ORTHO05D006558 5.1e-17 93.2 202 30.2
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 6.9e-14 82.8 93 52.7
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 3.4e-13 80.5 268 28.4
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 4.6e-10 70.1 79 48.1
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 4.3e-08 63.5 54 57.4
Duzib248G0391 Durio zibethinus HOM05D006199 ORTHO05D006558 3.7e-07 60.5 96 37.5


User provided reference genes

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