Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 4.4e-113 411.4 220 100.0
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 2.1e-99 365.9 210 93.8
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 1.4e-90 336.7 217 83.4
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 1.9e-55 219.9 145 79.3
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 1.0e-40 171.0 197 49.7
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 5.5e-39 165.2 211 44.5
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 1.8e-37 160.2 211 44.1
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 5.2e-37 158.7 214 45.3
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 5.9e-33 145.2 187 47.6
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.0e-32 144.4 184 47.3
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 2.9e-32 142.9 228 40.4
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 6.5e-32 141.7 171 49.1
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 6.8e-29 131.7 201 40.8
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 1.5e-28 130.6 145 51.7
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 5.7e-28 128.6 187 44.9
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 2.2e-27 126.7 140 50.0
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 2.2e-27 126.7 140 50.0
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 2.8e-27 126.3 202 41.1
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 1.4e-26 124.0 168 45.2
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 1.4e-26 124.0 133 54.1
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 2.4e-26 123.2 199 40.7
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 3.1e-26 122.9 177 48.0
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 5.4e-26 122.1 155 48.4
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 7.0e-26 121.7 199 37.7
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 7.0e-26 121.7 183 40.4
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 1.2e-25 120.9 157 44.6
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.6e-25 120.6 205 38.0
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 1.6e-25 120.6 155 47.7
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.6e-25 120.6 135 51.9
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 2.0e-25 120.2 189 42.9
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 4.5e-25 119.0 130 50.8
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.5e-25 119.0 136 52.9
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.0e-24 117.9 168 41.7
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 1.0e-24 117.9 168 41.7
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.3e-24 117.5 155 46.5
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 5.0e-24 115.5 138 50.0
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 5.0e-24 115.5 190 41.6
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 8.6e-24 114.8 184 39.1
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.1e-23 114.4 106 56.6
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 1.5e-23 114.0 176 42.0
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 3.3e-23 112.8 134 50.7
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 4.3e-23 112.5 212 39.6
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 5.6e-23 112.1 201 35.8
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 9.5e-23 111.3 171 41.5
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 1.6e-22 110.5 181 39.8
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 1.6e-22 110.5 181 39.8
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 1.6e-22 110.5 231 35.5
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 2.1e-22 110.2 185 40.0
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 2.1e-22 110.2 130 46.9
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 2.3e-21 106.7 192 38.5
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 2.6e-20 103.2 198 36.4
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 3.4e-20 102.8 179 39.1
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 7.5e-20 101.7 130 46.2
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 3.7e-19 99.4 138 44.2
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 3.7e-19 99.4 194 36.1
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 8.3e-19 98.2 152 41.4
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 2.4e-18 96.7 194 35.6
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 7.0e-18 95.1 152 39.5
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 1.6e-17 94.0 160 41.9
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 7.8e-17 91.7 171 37.4
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 1.7e-16 90.5 164 36.6
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 3.0e-16 89.7 160 38.8
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 3.9e-16 89.4 160 38.8
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 5.0e-16 89.0 160 38.8
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 5.0e-16 89.0 182 34.6
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 5.0e-16 89.0 186 33.9
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 6.6e-16 88.6 159 39.0
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 8.6e-16 88.2 176 36.4
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 1.1e-15 87.8 200 32.5
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 1.1e-15 87.8 178 37.1
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 1.5e-15 87.4 207 31.9
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 2.5e-15 86.7 136 41.2
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 4.3e-15 85.9 152 40.8
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 9.5e-15 84.7 162 35.8
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 2.1e-14 83.6 199 34.2
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 3.6e-14 82.8 197 35.0
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 3.6e-14 82.8 129 40.3
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 4.7e-14 82.4 196 34.2
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 8.0e-14 81.6 216 32.9
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 1.4e-13 80.9 198 34.3
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 1.4e-13 80.9 189 30.2
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.0e-13 79.3 204 31.4
Ca_26668_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 4.0e-13 79.3 126 38.9
ECA248G2427 Erigeron canadensis HOM05D002222 ORTHO05D002354 4.0e-13 79.3 140 37.9
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 4.0e-13 79.3 193 34.2
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 6.8e-13 78.6 218 33.0
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 6.8e-13 78.6 134 40.3
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 8.9e-13 78.2 209 30.6
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 1.2e-12 77.8 214 32.2
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 1.2e-12 77.8 133 41.4
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 1.5e-12 77.4 135 40.7
TPR.G31013 Trifolium pratense HOM05D003500 ORTHO05D003919 1.5e-12 77.4 187 31.6
Lalb_Chr03g0029341 Lupinus albus HOM05D003500 ORTHO05D003919 2.0e-12 77.0 129 38.8
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 4.4e-12 75.9 211 33.2
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 4.4e-12 75.9 198 33.3
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 5.8e-12 75.5 187 31.0
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 7.5e-12 75.1 209 30.1
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 1.3e-11 74.3 128 39.8
Oeu014656.1 Olea europaea HOM05D003500 ORTHO05D003919 1.7e-11 73.9 184 29.9
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 3.7e-11 72.8 134 38.1
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 4.9e-11 72.4 133 37.6
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 4.9e-11 72.4 191 32.5
Glyma.12G113900 Glycine max HOM05D003500 ORTHO05D003919 6.4e-11 72.0 126 36.5
Medtr6g007370 Medicago truncatula HOM05D003500 ORTHO05D003919 6.4e-11 72.0 127 33.9
Medtr7g446310 Medicago truncatula HOM05D003500 ORTHO05D003919 6.4e-11 72.0 127 33.9
arahy.Tifrunner.gnm1.ann1.V41S3G Arachis hypogaea HOM05D003500 ORTHO05D003919 8.3e-11 71.6 188 29.3
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 8.3e-11 71.6 157 33.8
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 8.3e-11 71.6 159 35.2
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 1.1e-10 71.2 132 36.4
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 1.4e-10 70.9 223 29.6
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 1.9e-10 70.5 196 32.7
SGA_v2.0_scaffold169G38640 Striga asiatica HOM05D003500 ORTHO05D003919 1.9e-10 70.5 197 33.5
TWI32G0121 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.9e-10 70.5 136 39.0
MSTRG.14007 Avicennia marina HOM05D003500 ORTHO05D003919 3.2e-10 69.7 154 39.0
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.2e-10 69.7 205 30.7
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 4.1e-10 69.3 232 33.2
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 4.1e-10 69.3 158 33.5
Lsat_1_v5_gn_1_49081 Lactuca sativa HOM05D003500 ORTHO05D003919 5.4e-10 68.9 202 28.7
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 5.4e-10 68.9 181 32.6
Sopen08g021950 Solanum pennellii HOM05D003500 ORTHO05D003919 5.4e-10 68.9 158 32.9
HPP92_005532 Vanilla planifolia HOM05D003500 ORTHO05D003919 5.4e-10 68.9 129 32.6
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 9.2e-10 68.2 208 27.9
Sed0000644 Sechium edule HOM05D003500 ORTHO05D003919 1.2e-09 67.8 136 36.0
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 1.2e-09 67.8 158 32.3
HanXRQChr01g0029371 Helianthus annuus HOM05D003500 ORTHO05D003919 1.6e-09 67.4 195 30.3
Psat7g063400 Pisum sativum HOM05D003500 ORTHO05D003919 1.6e-09 67.4 152 35.5
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 2.0e-09 67.0 223 29.6
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.0e-09 67.0 223 29.6
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 2.0e-09 67.0 213 27.7
Hund25650 Selenicereus undatus HOM05D003500 ORTHO05D003919 2.0e-09 67.0 128 33.6
CAN.G886.10 Capsicum annuum HOM05D003500 ORTHO05D003919 2.7e-09 66.6 158 31.6
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 3.5e-09 66.2 141 37.6
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 3.5e-09 66.2 129 34.1
PGR044G1892 Punica granatum HOM05D003500 ORTHO05D003919 3.5e-09 66.2 127 39.4
Hma1.2p1_0140F.1_g063720 Hydrangea macrophylla HOM05D003500 ORTHO05D003919 4.6e-09 65.9 171 32.7
Ciclev10009124m.g Citrus clementina HOM05D003500 ORTHO05D003919 6.0e-09 65.5 183 29.5
AUR62024822 Chenopodium quinoa HOM05D003500 ORTHO05D003919 1.7e-08 63.9 208 29.3
Eucgr.C02880 Eucalyptus grandis HOM05D003500 ORTHO05D003919 1.7e-08 63.9 158 32.3
AUR62032393 Chenopodium quinoa HOM05D003500 ORTHO05D003919 3.0e-08 63.2 188 31.4
Phvul.011G117800 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 3.9e-08 62.8 125 34.4
Ah.10g025530 Amaranthus hybridus HOM05D003500 ORTHO05D003919 5.0e-08 62.4 155 31.6
DCAR_003060 Daucus carota HOM05D003500 ORTHO05D003919 8.6e-08 61.6 198 30.3
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 8.6e-08 61.6 126 35.7
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 1.1e-07 61.2 129 32.6
Prupe.1G454700 Prunus persica HOM05D003500 ORTHO05D003919 1.5e-07 60.8 128 34.4
Migut.E01507 Erythranthe guttata HOM05D003500 ORTHO05D003919 1.9e-07 60.5 176 31.8
Lj3g0003659 Lotus japonicus HOM05D003500 ORTHO05D003919 1.9e-07 60.5 204 30.4
Zm00001eb366780 Zea mays HOM05D039918 ORTHO05D003919 2.5e-07 60.1 126 37.3
arahy.Tifrunner.gnm1.ann1.HR3BJH Arachis hypogaea HOM05D003500 ORTHO05D003919 4.3e-07 59.3 182 28.0
CsaV3_2G031120 Cucumis sativus L. HOM05D003500 ORTHO05D003919 4.3e-07 59.3 134 33.6
ATR0051G010 Amborella trichopoda HOM05D003500 ORTHO05D003919 5.6e-07 58.9 135 36.3
EL10Ac2g02525 Beta vulgaris HOM05D003500 ORTHO05D003919 9.5e-07 58.2 206 30.1
MELO3C011162.2 Cucumis melo HOM05D003500 ORTHO05D003919 9.5e-07 58.2 134 32.8
MD15G1099900 Malus domestica HOM05D003500 ORTHO05D003919 2.8e-06 56.6 135 34.1
A08p18080 Brassica napus HOM05D003500 ORTHO05D003919 6.2e-06 55.5 136 33.1
C03p87180 Brassica napus HOM05D003500 ORTHO05D003919 8.1e-06 55.1 131 33.6
BolC3t21020H Brassica oleracea HOM05D003500 ORTHO05D003919 8.1e-06 55.1 131 33.6
BraA08t33760Z Brassica rapa HOM05D003500 ORTHO05D003919 8.1e-06 55.1 131 32.8


User provided reference genes

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