Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005831g0110 Nicotiana tabacum HOM05D008016 ORTHO05D011667 9.2e-130 466.8 229 100.0
Gohir.1Z049482 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.2e-31 141.0 81 85.2
Nitab4.5_0007400g0090 Nicotiana tabacum HOM05D008016 ORTHO05D004271 3.7e-30 136.0 82 81.7
Nitab4.5_0001170g0110 Nicotiana tabacum HOM05D008016 ORTHO05D004271 1.3e-27 127.5 82 78.0
Sed0000469 Sechium edule HOM05D010190 ORTHO05D009823 3.9e-27 125.9 81 77.8
Sed0006309 Sechium edule HOM05D010190 ORTHO05D009823 3.9e-27 125.9 81 77.8
Sed0014465 Sechium edule HOM05D010190 ORTHO05D004271 3.9e-27 125.9 81 77.8
RcHm_v2.0_Chr4g0392721 Rosa chinensis HOM05D008016 ORTHO05D004271 2.1e-25 120.2 86 74.4
Atru.chr13.2455 Acer truncatum HOM05D010488 ORTHO05D011667 8.9e-24 114.8 60 90.0
Hma1.2p1_0594F.1_g185796 Hydrangea macrophylla HOM05D010488 ORTHO05D011667 8.9e-24 114.8 60 90.0
Hma1.2p1_2223F.1_g317436 Hydrangea macrophylla HOM05D010488 ORTHO05D011667 8.9e-24 114.8 60 90.0
Peaxi162Scf00987g00216 Petunia axillaris HOM05D010488 ORTHO05D011667 8.9e-24 114.8 60 90.0
arahy.Tifrunner.gnm1.ann1.3W5ZV8 Arachis hypogaea HOM05D010488 ORTHO05D011667 1.5e-23 114.0 57 93.0
BraSC59t46557Z Brassica rapa HOM05D008016 ORTHO05D004271 5.8e-23 112.1 64 85.9
Solyc06g043035.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 6.4e-22 108.6 66 81.8
FAN26G0841 Fragaria x ananassa HOM05D010488 ORTHO05D011667 8.3e-22 108.2 57 87.7
Migut.A01208 Erythranthe guttata HOM05D008016 ORTHO05D004271 4.1e-21 105.9 60 85.0
Lsat_1_v5_gn_4_63021 Lactuca sativa HOM05D007952 ORTHO05D009823 2.7e-20 103.2 57 87.7
Gohir.A09G103364 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.3e-19 100.9 57 86.0
C04p22520 Brassica napus HOM05D008016 ORTHO05D004271 1.7e-19 100.5 57 84.2
BolSC29t60557H Brassica oleracea HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
BolSC35t60714H Brassica oleracea HOM05D008016 ORTHO05D004271 1.7e-19 100.5 57 84.2
BolSC45t60920H Brassica oleracea HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
BolSC46t60968H Brassica oleracea HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
BraSC103t45418Z Brassica rapa HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
BraSC103t45496Z Brassica rapa HOM05D008016 ORTHO05D004271 1.7e-19 100.5 57 84.2
BraSC25t45901Z Brassica rapa HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
BraSC25t45922Z Brassica rapa HOM05D008016 ORTHO05D010588 1.7e-19 100.5 57 84.2
Gohir.A13G086605 Gossypium hirsutum HOM05D008016 ORTHO05D004271 6.6e-19 98.6 57 84.2
BolSC44t60833H Brassica oleracea HOM05D008016 ORTHO05D004271 8.6e-19 98.2 56 83.9
arahy.Tifrunner.gnm1.ann1.256FDB Arachis hypogaea HOM05D010488 ORTHO05D011667 1.1e-18 97.8 85 61.2
VMungo0580G0001 Vigna mungo HOM05D010488 ORTHO05D011667 9.6e-18 94.7 57 80.7
Ca_02733_v3 Cicer arietinum L. HOM05D008016 ORTHO05D009823 1.2e-17 94.4 63 77.8
Lalb_Chr15g0080721 Lupinus albus HOM05D008016 ORTHO05D004271 8.1e-17 91.7 60 78.3
Lsat_1_v5_gn_4_145441 Lactuca sativa HOM05D010488 ORTHO05D011667 1.4e-16 90.9 51 82.4
CAN.G798.1 Capsicum annuum HOM05D010488 ORTHO05D011667 1.8e-16 90.5 56 80.4
CAN.G167.1 Capsicum annuum HOM05D010488 ORTHO05D011667 4.0e-16 89.4 56 78.6
Gohir.A07G174766 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.0e-16 89.4 52 82.7
Lalb_Chr03g0039361 Lupinus albus HOM05D008016 ORTHO05D004271 5.8e-15 85.5 56 78.6
ECA240G1937 Erigeron canadensis HOM05D004537 ORTHO05D011667 7.6e-15 85.1 44 88.6
Nitab4.5_0004137g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 2.2e-14 83.6 62 71.0
Lalb_Chr00c21g0405241 Lupinus albus HOM05D007099 ORTHO05D009081 2.9e-14 83.2 57 75.4
Migut.D01400 Erythranthe guttata HOM05D007952 ORTHO05D009823 3.8e-14 82.8 95 50.5
RcHm_v2.0_Chr7g0221131 Rosa chinensis HOM05D008016 ORTHO05D004271 4.9e-14 82.4 54 75.9
Gohir.A02G134102 Gossypium hirsutum HOM05D008016 ORTHO05D004271 1.9e-13 80.5 45 86.7
MD00G1140100 Malus domestica HOM05D008016 ORTHO05D004271 1.9e-13 80.5 52 80.8
Solyc11g044665.1 Solanum lycopersicum HOM05D008016 ORTHO05D004271 2.4e-13 80.1 72 61.1
Gohir.A09G101825 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.2e-13 79.3 46 80.4
BolSC35t60682H Brassica oleracea HOM05D008016 ORTHO05D010588 3.0e-11 73.2 55 70.9
Glyma.15G274900 Glycine max HOM05D008016 ORTHO05D004271 3.0e-11 73.2 46 76.1
Gohir.1Z049580 Gossypium hirsutum HOM05D008016 ORTHO05D004271 3.9e-11 72.8 43 86.0
Lsat_1_v5_gn_2_98441 Lactuca sativa HOM05D008016 ORTHO05D004271 1.1e-10 71.2 42 81.0
Nitab4.5_0004841g0080 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.1e-10 71.2 61 63.9
Gorai.001G161900 Gossypium raimondii HOM05D007099 ORTHO05D009081 3.3e-10 69.7 40 90.0
Peaxi162Scf00080g00520 Petunia axillaris HOM05D008037 ORTHO05D004271 7.3e-10 68.6 47 76.6
THA.LOC104825605 Tarenaya hassleriana HOM05D007099 ORTHO05D009081 9.6e-10 68.2 40 87.5
Oeu043853.1 Olea europaea HOM05D000994 ORTHO05D011667 1.3e-09 67.8 35 85.7
Nitab4.5_0000002g0310 Nicotiana tabacum HOM05D010190 ORTHO05D004271 1.4e-08 64.3 38 81.6
Gohir.D07G151450 Gossypium hirsutum HOM05D008016 ORTHO05D004271 4.0e-08 62.8 63 54.0
arahy.Tifrunner.gnm1.ann1.KSIE27 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.2e-07 61.2 35 80.0
arahy.Tifrunner.gnm1.ann1.RE2PS1 Arachis hypogaea HOM05D007952 ORTHO05D009823 1.2e-07 61.2 40 77.5
BraSC179t45783Z Brassica rapa HOM05D008016 ORTHO05D004271 2.6e-07 60.1 36 83.3
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 7.6e-07 58.5 60 56.7
DCAR_017252 Daucus carota HOM05D010488 ORTHO05D011667 1.3e-06 57.8 41 65.9
Lj2P1221T100 Lonicera japonica HOM05D007099 ORTHO05D009081 1.3e-06 57.8 33 87.9
Manes.07G046200 Manihot esculenta HOM05D008037 ORTHO05D004271 1.3e-06 57.8 36 77.8
Glyma.05G091932 Glycine max HOM05D007099 ORTHO05D009081 1.7e-06 57.4 40 80.0
CiPaw.14G028800 Carya illinoinensis HOM05D008016 ORTHO05D004271 2.2e-06 57.0 53 64.2
COL.COLO4_06718 Corchorus olitorius HOM05D007099 ORTHO05D009081 2.2e-06 57.0 33 84.8
Sed0021589 Sechium edule HOM05D008016 ORTHO05D004271 2.2e-06 57.0 35 80.0
Aqoxy12s037 Aquilegia oxysepala HOM05D007099 ORTHO05D009081 2.9e-06 56.6 33 84.8
Lalb_Chr00c21g0405211 Lupinus albus HOM05D007099 ORTHO05D009081 3.8e-06 56.2 31 90.3
Lalb_Chr00c21g0405401 Lupinus albus HOM05D007099 ORTHO05D009081 3.8e-06 56.2 31 90.3
Lalb_Chr00c24g0407161 Lupinus albus HOM05D007099 ORTHO05D009081 3.8e-06 56.2 31 90.3
BcaC05g27379 Brassica carinata HOM05D008016 ORTHO05D021751 4.9e-06 55.8 35 77.1
ATR0573G002 Amborella trichopoda HOM05D007099 ORTHO05D009081 8.4e-06 55.1 36 75.0
Nitab4.5_0004300g0130 Nicotiana tabacum HOM05D002864 ORTHO05D007972 8.4e-06 55.1 34 82.4
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 8.4e-06 55.1 49 59.2


User provided reference genes

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