Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005831g0100 Nicotiana tabacum HOM05D008490 ORTHO05D010725 6.2e-71 270.8 145 100.0
Lsat_1_v5_gn_5_16200 Lactuca sativa HOM05D005210 ORTHO05D010286 8.4e-28 127.5 64 87.5
Lsat_1_v5_gn_5_16680 Lactuca sativa HOM05D008490 ORTHO05D010725 8.4e-28 127.5 64 87.5
TPR.G7850 Trifolium pratense HOM05D008490 ORTHO05D010725 5.5e-27 124.8 64 85.9
MBI16_g26183_MAGBIO Magnolia biondii HOM05D001356 ORTHO05D008843 4.6e-26 121.7 64 84.4
Sed0016837 Sechium edule HOM05D008490 ORTHO05D010725 1.8e-25 119.8 59 88.1
Peaxi162Scf00477g00823 Petunia axillaris HOM05D008490 ORTHO05D010725 8.7e-25 117.5 57 87.7
MBI05_g05344_MAGBIO Magnolia biondii HOM05D008490 ORTHO05D010725 2.5e-24 115.9 57 87.7
Nitab4.5_0006476g0030 Nicotiana tabacum HOM05D008490 ORTHO05D010725 3.3e-24 115.5 62 80.6
arahy.Tifrunner.gnm1.ann1.BZJ16Q Arachis hypogaea HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
arahy.Tifrunner.gnm1.ann1.GRFW67 Arachis hypogaea HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
arahy.Tifrunner.gnm1.ann1.PAX1AS Arachis hypogaea HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
Lj5g0013341 Lotus japonicus HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
LjContig00439g0024223 Lotus japonicus HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
VMungo0329G0002 Vigna mungo HOM05D008490 ORTHO05D010725 6.2e-23 111.3 56 85.7
Psat4g185480 Pisum sativum HOM05D008490 ORTHO05D010725 1.8e-22 109.8 56 83.9
Lj5g0002635 Lotus japonicus HOM05D008490 ORTHO05D010725 6.9e-22 107.8 56 83.9
Sed0023681 Sechium edule HOM05D008490 ORTHO05D010725 3.4e-21 105.5 63 74.6
CSS0048923 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 7.6e-21 104.4 51 88.2
PGSC0003DMG400004057 Solanum tuberosum HOM05D008490 ORTHO05D010725 1.0e-20 104.0 50 90.0
ECA039G0024 Erigeron canadensis HOM05D008490 ORTHO05D010725 1.3e-20 103.6 50 90.0
Sopen00g006810 Solanum pennellii HOM05D008490 ORTHO05D010725 7.1e-19 97.8 56 76.8
MBI14_g38259_MAGBIO Magnolia biondii HOM05D002660 ORTHO05D010725 1.1e-16 90.5 62 69.4
Nitab4.5_0000172g1820 Nicotiana tabacum HOM05D008490 ORTHO05D010725 2.5e-16 89.4 56 75.0
Nn2g14502 Nelumbo nucifera HOM05D008490 ORTHO05D010725 3.3e-16 89.0 46 82.6
Sc14g0003240 Simmondsia chinensis HOM05D008490 ORTHO05D010725 3.3e-16 89.0 42 88.1
unitig_87.g27953 Utricularia gibba HOM05D008490 ORTHO05D010725 3.3e-16 89.0 42 88.1
Nitab4.5_0004632g0020 Nicotiana tabacum HOM05D008490 ORTHO05D010725 1.3e-15 87.0 51 66.7
Actinidia34838 Actinidia chinensis HOM05D008490 ORTHO05D010725 1.6e-15 86.7 42 85.7
Phvul.002G106400 Phaseolus vulgaris HOM05D008490 ORTHO05D010725 4.8e-15 85.1 46 80.4
CSS0002229 Camellia sinensis var. sinensis HOM05D008490 ORTHO05D010725 1.9e-11 73.2 49 69.4
Nitab4.5_0000127g0060 Nicotiana tabacum HOM05D008490 ORTHO05D010725 8.8e-09 64.3 35 77.1
Nitab4.5_0002750g0090 Nicotiana tabacum HOM05D016048 ORTHO05D022962 8.8e-09 64.3 47 74.5
Nitab4.5_0001960g0110 Nicotiana tabacum HOM05D003574 ORTHO05D010997 1.1e-08 63.9 43 74.4
Nitab4.5_0000065g0100 Nicotiana tabacum HOM05D003106 ORTHO05D004173 2.0e-08 63.2 134 39.6
Nitab4.5_0007370g0040 Nicotiana tabacum HOM05D016048 ORTHO05D022962 3.3e-08 62.4 42 76.2
Nitab4.5_0000258g0030 Nicotiana tabacum HOM05D003106 ORTHO05D283791 1.3e-07 60.5 47 68.1
Sc25g0002270 Simmondsia chinensis HOM05D008490 ORTHO05D010725 1.1e-06 57.4 30 80.0


User provided reference genes

Program Settings