Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 3.9e-221 771.2 389 100.0
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.8e-109 400.2 300 72.7
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.5e-100 369.0 336 63.1
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 8.5e-75 285.0 364 49.5
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 2.5e-74 283.5 350 54.9
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 7.9e-65 251.9 263 58.2
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.4e-64 251.1 175 77.7
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.8e-64 250.8 333 49.8
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 1.8e-61 240.7 138 90.6
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 9.1e-61 238.4 231 60.6
Cpa.g.sc263.24 Carica papaya HOM05D002965 ORTHO05D011068 1.2e-60 238.0 177 72.9
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.5e-60 236.5 138 89.1
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.5e-60 236.5 138 89.1
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 7.7e-60 235.3 449 44.5
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-58 231.5 321 48.0
Nitab4.5_0002418g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 5.5e-58 229.2 208 61.1
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 2.1e-57 227.3 146 81.5
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 6.1e-57 225.7 137 86.1
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 1.4e-56 224.6 177 71.8
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.8e-56 224.2 138 85.5
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 3.0e-56 223.4 139 83.5
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 5.7e-55 219.2 133 86.5
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 1.7e-54 217.6 128 88.3
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 7.0e-53 212.2 150 77.3
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 7.0e-53 212.2 150 77.3
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 5.9e-52 209.1 150 76.7
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 1.3e-51 208.0 123 87.8
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 4.7e-49 199.5 207 59.9
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 8.8e-48 195.3 138 77.5
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.1e-42 178.3 245 49.8
Nitab4.5_0000859g0160 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.2e-41 174.9 124 73.4
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 1.0e-40 171.8 103 88.3
Nitab4.5_0002558g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.0e-40 169.9 177 57.1
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.6e-39 167.2 267 46.4
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 4.4e-39 166.4 173 54.3
Nitab4.5_0001796g0200 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.5e-36 156.4 125 66.4
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.0e-35 155.2 102 80.4
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 1.7e-35 154.5 93 88.2
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 1.7e-35 154.5 93 88.2
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.1e-34 151.8 288 41.3
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.5e-34 150.6 102 74.5
Nitab4.5_0005613g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 3.3e-34 150.2 151 57.0
PGSC0003DMG400017419 Solanum tuberosum HOM05D002965 ORTHO05D011068 9.5e-34 148.7 90 86.7
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 4.7e-33 146.4 93 84.9
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 6.1e-33 146.0 103 78.6
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.2e-31 141.7 92 83.7
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 7.5e-31 139.0 83 89.2
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 7.5e-31 139.0 94 81.9
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 9.8e-31 138.7 83 89.2
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 2.2e-30 137.5 96 75.0
Nitab4.5_0002653g0030 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.9e-30 137.1 166 53.0
Peaxi162Scf00863g00003 Petunia axillaris HOM05D002965 ORTHO05D011068 3.2e-29 133.7 74 83.8
Ca_28560_v3 Cicer arietinum L. HOM05D002965 ORTHO05D010536 1.7e-27 127.9 167 49.1
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 1.7e-27 127.9 92 73.9
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 3.9e-27 126.7 80 86.2
Aa31csc822G20 Aethionema arabicum HOM05D002965 ORTHO05D011068 6.6e-27 125.9 198 47.0
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 2.1e-25 120.9 78 83.3
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 3.6e-25 120.2 76 84.2
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 3.6e-25 120.2 76 84.2
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 3.6e-25 120.2 76 84.2
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 3.6e-25 120.2 76 84.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 6.2e-25 119.4 88 75.0
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 3.1e-24 117.1 65 90.8
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 1.2e-23 115.2 88 75.0
Peaxi162Scf02014g00001 Petunia axillaris HOM05D016050 ORTHO05D011068 7.5e-23 112.5 150 46.7
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 4.9e-22 109.8 64 90.6
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 1.9e-21 107.8 64 89.1
Sopen06g007640 Solanum pennellii HOM05D002965 ORTHO05D012151 1.9e-21 107.8 108 54.6
ATMG01130 Arabidopsis thaliana HOM05D002965 ORTHO05D011068 5.4e-21 106.3 88 73.9
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 5.4e-21 106.3 63 90.5
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.6e-20 104.8 72 81.9
Nitab4.5_0000580g0190 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.0e-20 104.4 125 48.8
CSS0045201 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D011068 3.5e-20 103.6 60 91.7
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.0e-19 102.1 60 90.0
Haze_01424 Corylus avellana HOM05D022652 ORTHO05D011068 1.0e-19 102.1 180 43.9
Haze_01425 Corylus avellana HOM05D022652 ORTHO05D011068 1.0e-19 102.1 180 43.9
ECA246G1890 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.7e-19 101.3 67 71.6
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 2.3e-19 100.9 77 74.0
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 1.9e-18 97.8 63 82.5
Eucgr.C02171 Eucalyptus grandis HOM05D002965 ORTHO05D011068 3.3e-18 97.1 67 77.6
SHI27034 Sapria himalayana HOM05D023343 ORTHO05D011068 7.3e-18 95.9 153 39.9
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 1.1e-16 92.0 56 87.5
ClCG01G010190 Citrullus lanatus HOM05D042035 ORTHO05D016641 1.8e-16 91.3 75 61.3
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 2.3e-16 90.9 58 84.5
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 3.1e-16 90.5 101 56.4
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 4.0e-16 90.1 54 88.9
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.4e-15 86.7 60 78.3
Nitab4.5_0001763g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 1.3e-14 85.1 160 38.8
Nitab4.5_0000215g0080 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.2e-14 84.3 102 45.1
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 3.7e-14 83.6 118 47.5
Thhalv10022991m.g Eutrema salsugineum HOM05D016050 ORTHO05D011068 3.7e-14 83.6 61 77.0
Nitab4.5_0000215g0070 Nicotiana tabacum HOM05D002965 ORTHO05D011068 4.1e-13 80.1 64 67.2
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 3.5e-12 77.0 73 58.9
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 1.7e-11 74.7 65 58.5
SHI29064 Sapria himalayana HOM05D002965 ORTHO05D010183 1.7e-11 74.7 60 65.0
MELO3C023755.2 Cucumis melo HOM05D066561 ORTHO05D011068 6.6e-11 72.8 89 51.7
Nitab4.5_0000859g0140 Nicotiana tabacum HOM05D002965 ORTHO05D011068 7.3e-10 69.3 43 86.0
Nitab4.5_0002072g0110 Nicotiana tabacum HOM05D002965 ORTHO05D011068 2.1e-09 67.8 34 88.2
SHI27232 Sapria himalayana HOM05D022652 ORTHO05D011068 2.1e-09 67.8 42 64.3
SHI25680 Sapria himalayana HOM05D022652 ORTHO05D011068 6.2e-09 66.2 42 71.4
Solyc04g051275.1 Solanum lycopersicum HOM05D002965 ORTHO05D011068 8.1e-09 65.9 60 65.0
Nitab4.5_0004376g0100 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.3e-08 64.3 37 89.2
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 2.6e-07 60.8 72 52.8
BNapus_Darmor_BZH_scaffold_234p00010 Brassica napus HOM05D016050 ORTHO05D011068 5.8e-07 59.7 118 42.4
BolSC28t60381H Brassica oleracea HOM05D016050 ORTHO05D011068 5.8e-07 59.7 118 42.4
BraSC224t45813Z Brassica rapa HOM05D016050 ORTHO05D011068 5.8e-07 59.7 118 42.4
BraSC77t46623Z Brassica rapa HOM05D016050 ORTHO05D011068 5.8e-07 59.7 118 42.4
CsaV3_UNG209190 Cucumis sativus L. HOM05D016050 ORTHO05D011068 4.9e-06 56.6 100 36.0


User provided reference genes

Program Settings