Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005831g0050 Nicotiana tabacum HOM05D002660 ORTHO05D000314 2.1e-67 258.8 126 100.0
Nitab4.5_0001155g0080 Nicotiana tabacum HOM05D002660 ORTHO05D011807 9.9e-17 90.5 58 75.9
Nitab4.5_0004300g0040 Nicotiana tabacum HOM05D002660 ORTHO05D011807 8.4e-16 87.4 58 72.4
Nitab4.5_0002716g0050 Nicotiana tabacum HOM05D002660 ORTHO05D011807 3.2e-15 85.5 58 72.4
Nitab4.5_0001234g0080 Nicotiana tabacum HOM05D002660 ORTHO05D285742 5.1e-13 78.2 41 82.9
Nitab4.5_0001788g0190 Nicotiana tabacum HOM05D002660 ORTHO05D011807 1.5e-12 76.6 58 65.5
Nitab4.5_0000177g0020 Nicotiana tabacum HOM05D002660 ORTHO05D285889 4.3e-12 75.1 41 80.5
Nitab4.5_0004300g0090 Nicotiana tabacum HOM05D002660 ORTHO05D011807 5.3e-10 68.2 44 75.0
DCAR_032529 Daucus carota HOM05D000445 ORTHO05D000314 2.2e-08 62.8 31 93.5
DCAR_032547 Daucus carota HOM05D000445 ORTHO05D000314 2.2e-08 62.8 31 93.5
Solyc00g500037.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Solyc00g500046.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Solyc00g500081.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Solyc00g500128.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Solyc00g500198.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Solyc00g500327.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
PGSC0003DMG400015060 Solanum tuberosum HOM05D000445 ORTHO05D000314 1.9e-07 59.7 31 90.3
Nitab4.5_0027450g0020 Nicotiana tabacum HOM05D000445 ORTHO05D000314 5.5e-07 58.2 31 87.1
EL10As18g24166 Beta vulgaris HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0392g0574461 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0394g0574511 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0434g0574681 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0451g0574821 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0454g0574911 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0524g0575411 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0533g0575561 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr00c0585g0576241 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr01g0020161 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr11g0321171 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr11g0326541 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr11g0327091 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr13g0416601 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQChr15g0474951 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQCPg0580251 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
HanXRQCPg0580471 Helianthus annuus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hma1.2p1_0192F.1_g083690 Hydrangea macrophylla HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Lsat_1_v5_gn_3_105620 Lactuca sativa HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Lsat_1_v5_gn_3_13441 Lactuca sativa HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Lsat_1_v5_gn_8_26500 Lactuca sativa HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Lsat_1_v5_gn_9_18701 Lactuca sativa HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund08796 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund10280 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund28591 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund28646 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund28772 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Hund29423 Selenicereus undatus HOM05D000445 ORTHO05D000314 9.3e-07 57.4 31 87.1
Ah.10g027230 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.2e-06 57.0 31 87.1
Ah.10g027290 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.2e-06 57.0 31 87.1
Ah.10g027420 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.2e-06 57.0 31 87.1
Ah.10g027670 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.2e-06 57.0 31 87.1
Ah.10g027730 Amaranthus hybridus HOM05D000445 ORTHO05D000314 1.2e-06 57.0 31 87.1
Peaxi162Scf00211g00218 Petunia axillaris HOM05D000445 ORTHO05D000314 1.2e-06 57.0 30 86.7
Nitab4.5_0020349g0060 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-06 56.2 31 83.9
Nitab4.5_0023562g0040 Nicotiana tabacum HOM05D000445 ORTHO05D000314 2.1e-06 56.2 31 87.1
Solyc00g500148.1 Solanum lycopersicum HOM05D000445 ORTHO05D000314 2.1e-06 56.2 31 87.1
Thhalv10001808m.g Eutrema salsugineum HOM05D000445 ORTHO05D000314 2.7e-06 55.8 31 83.9
AL2G20470 Arabidopsis lyrata HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
C06p21350 Brassica napus HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BolSC37t60781H Brassica oleracea HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BolSC49t61128H Brassica oleracea HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BraSC103t45415Z Brassica rapa HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BraSC103t45439Z Brassica rapa HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BraSC143t45643Z Brassica rapa HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BraSC179t45786Z Brassica rapa HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
BraSC59t46524Z Brassica rapa HOM05D000445 ORTHO05D000314 3.5e-06 55.5 31 83.9
HanXRQChr11g0336101 Helianthus annuus HOM05D000445 ORTHO05D000314 4.6e-06 55.1 30 86.7
HanXRQChr11g0336121 Helianthus annuus HOM05D000445 ORTHO05D000314 4.6e-06 55.1 30 86.7
HanXRQChr12g0369911 Helianthus annuus HOM05D000445 ORTHO05D000314 4.6e-06 55.1 30 86.7
Nn070s42380 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.6e-06 55.1 31 83.9
Nn269s46007 Nelumbo nucifera HOM05D000445 ORTHO05D000314 4.6e-06 55.1 31 83.9
Hund29402 Selenicereus undatus HOM05D000445 ORTHO05D000314 4.6e-06 55.1 30 86.7
TAR383G0379 Trochodendron aralioides HOM05D000445 ORTHO05D000314 4.6e-06 55.1 31 83.9
unitig_91.g26515 Utricularia gibba HOM05D000445 ORTHO05D000314 4.6e-06 55.1 31 83.9
unitig_91.g26530 Utricularia gibba HOM05D000445 ORTHO05D000314 4.6e-06 55.1 31 83.9
EL10Ac1g00652 Beta vulgaris HOM05D000445 ORTHO05D000314 6.0e-06 54.7 31 83.9
CsaV3_UNG209000 Cucumis sativus L. HOM05D000445 ORTHO05D000314 6.0e-06 54.7 31 83.9
Eucgr.G01321 Eucalyptus grandis HOM05D000445 ORTHO05D000314 6.0e-06 54.7 29 86.2
Gohir.A04G039060 Gossypium hirsutum HOM05D000445 ORTHO05D000314 6.0e-06 54.7 31 83.9
Gorai.009G328900 Gossypium raimondii HOM05D000445 ORTHO05D000314 6.0e-06 54.7 39 71.8
Sc05g0004090 Simmondsia chinensis HOM05D000445 ORTHO05D000314 7.9e-06 54.3 31 83.9


User provided reference genes

Program Settings