Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005808g0010 Nicotiana tabacum HOM05D002974 ORTHO05D002992 2.0e-70 269.2 158 100.0
Nitab4.5_0003481g0110 Nicotiana tabacum HOM05D002974 ORTHO05D002992 1.4e-55 219.9 154 84.4
CAN.G134.10 Capsicum annuum HOM05D002974 ORTHO05D002992 5.6e-33 144.8 174 56.3
Solyc01g096510.2 Solanum lycopersicum HOM05D002974 ORTHO05D002992 4.7e-32 141.7 156 56.4
Sopen01g040240 Solanum pennellii HOM05D002974 ORTHO05D002992 1.0e-31 140.6 156 55.8
PGSC0003DMG400005401 Solanum tuberosum HOM05D002974 ORTHO05D002992 3.0e-31 139.0 160 64.4
Oeu006786.1 Olea europaea HOM05D002974 ORTHO05D002992 3.0e-18 95.9 162 42.6
Oeu053079.1 Olea europaea HOM05D002974 ORTHO05D002992 6.2e-16 88.2 148 39.2
Peaxi162Scf00082g00006 Petunia axillaris HOM05D002974 ORTHO05D002992 3.1e-15 85.9 61 83.6
Dinv32015 Davidia involucrata HOM05D002974 ORTHO05D002992 8.9e-15 84.3 147 40.8
Dinv44699 Davidia involucrata HOM05D002974 ORTHO05D002992 1.2e-14 84.0 155 41.3
Potri.001G029700 Populus trichocarpa HOM05D002974 ORTHO05D002992 3.4e-14 82.4 155 41.3
MSTRG.28034 Avicennia marina HOM05D002974 ORTHO05D002992 7.5e-14 81.3 168 35.1
Oeu064130.1 Olea europaea HOM05D002974 ORTHO05D002992 9.8e-14 80.9 168 39.9
Oeu011571.1 Olea europaea HOM05D002974 ORTHO05D002992 2.9e-13 79.3 152 36.2
Rhsim07G0068200 Rhododendron simsii HOM05D002974 ORTHO05D002992 6.4e-13 78.2 150 36.0
Sc11g0006360 Simmondsia chinensis HOM05D002974 ORTHO05D002992 1.1e-12 77.4 62 61.3
Migut.B01240 Erythranthe guttata HOM05D002974 ORTHO05D002992 2.1e-11 73.2 151 37.7
MSTRG.5073 Avicennia marina HOM05D002974 ORTHO05D002992 2.7e-11 72.8 141 39.0
Manes.11G007000 Manihot esculenta HOM05D002974 ORTHO05D002992 2.7e-11 72.8 69 59.4
Migut.N01854 Erythranthe guttata HOM05D002974 ORTHO05D002992 3.5e-11 72.4 155 38.7
FvH4_7g03520 Fragaria vesca HOM05D002974 ORTHO05D002992 3.5e-11 72.4 158 36.1
FAN06G3677 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.5e-11 72.4 158 36.1
PGR031G0048 Punica granatum HOM05D002974 ORTHO05D002992 4.6e-11 72.0 91 52.7
QL04p017813 Quercus lobata HOM05D002974 ORTHO05D002992 6.0e-11 71.6 80 55.0
QL04p018674 Quercus lobata HOM05D002974 ORTHO05D002992 6.0e-11 71.6 80 55.0
Sabra03G0145400 Salix brachista HOM05D002974 ORTHO05D002992 6.0e-11 71.6 70 61.4
TWI15G0153 Tripterygium wilfordii HOM05D002974 ORTHO05D002992 6.0e-11 71.6 152 38.2
CiPaw.14G008700 Carya illinoinensis HOM05D002974 ORTHO05D002992 1.0e-10 70.9 69 60.9
FAN01G3097 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.0e-10 70.9 69 59.4
RcHm_v2.0_Chr1g0325821 Rosa chinensis HOM05D002974 ORTHO05D002992 1.0e-10 70.9 69 59.4
FAN03G0828 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.3e-10 70.5 69 59.4
Duzib114G0524 Durio zibethinus HOM05D002974 ORTHO05D002992 1.7e-10 70.1 73 63.0
FAN10G2850 Fragaria x ananassa HOM05D002974 ORTHO05D002992 1.7e-10 70.1 69 59.4
Potri.003G194700 Populus trichocarpa HOM05D002974 ORTHO05D002992 2.3e-10 69.7 59 66.1
Thecc.10G149600 Theobroma cacao HOM05D002974 ORTHO05D002992 2.3e-10 69.7 73 58.9
CiPaw.13G015100 Carya illinoinensis HOM05D002974 ORTHO05D002992 3.9e-10 68.9 68 60.3
Prupe.2G041200 Prunus persica HOM05D002974 ORTHO05D002992 3.9e-10 68.9 67 59.7
Duzib106G1811 Durio zibethinus HOM05D002974 ORTHO05D002992 6.6e-10 68.2 73 58.9
COL.COLO4_20695 Corchorus olitorius HOM05D003550 ORTHO05D004336 1.5e-09 67.0 72 51.4
Cfa010941 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.9e-09 66.6 70 55.7
Sc10g0004500 Simmondsia chinensis HOM05D002974 ORTHO05D002992 2.5e-09 66.2 96 44.8
Manes.04G157400 Manihot esculenta HOM05D002974 ORTHO05D002992 3.3e-09 65.9 85 52.9
SGA_v2.0_scaffold232G43495 Striga asiatica HOM05D002974 ORTHO05D002992 3.3e-09 65.9 164 33.5
TAR623G1017 Trochodendron aralioides HOM05D002974 ORTHO05D002992 3.3e-09 65.9 57 66.7
Gohir.D10G194600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 5.6e-09 65.1 69 52.2
Gorai.011G217100 Gossypium raimondii HOM05D002974 ORTHO05D002992 5.6e-09 65.1 69 52.2
Gohir.A10G187100 Gossypium hirsutum HOM05D002974 ORTHO05D002992 7.3e-09 64.7 69 52.2
Gohir.D04G016200 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.2e-08 63.9 69 56.5
Nn7g36749 Nelumbo nucifera HOM05D002974 ORTHO05D002992 1.2e-08 63.9 95 45.3
AUR62026884 Chenopodium quinoa HOM05D012416 ORTHO05D002992 1.6e-08 63.5 67 53.7
AUR62031748 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.6e-08 63.5 67 53.7
AUR62044059 Chenopodium quinoa HOM05D012416 ORTHO05D006373 1.6e-08 63.5 67 53.7
MELO3C012484.2 Cucumis melo HOM05D002974 ORTHO05D002992 1.6e-08 63.5 61 60.7
Gohir.A05G399600 Gossypium hirsutum HOM05D002974 ORTHO05D002992 1.6e-08 63.5 69 58.0
QL04p017793 Quercus lobata HOM05D002974 ORTHO05D002992 1.6e-08 63.5 41 78.0
SalBow5G5227 Salvia bowleyana HOM05D002974 ORTHO05D002992 1.6e-08 63.5 68 51.5
CANSAT56G2792 Cannabis sativa HOM05D002974 ORTHO05D002992 2.1e-08 63.2 43 74.4
Eucgr.G03218 Eucalyptus grandis HOM05D002974 ORTHO05D002992 2.1e-08 63.2 74 50.0
Gorai.012G018900 Gossypium raimondii HOM05D002974 ORTHO05D002992 2.1e-08 63.2 103 47.6
Nn2g14777 Nelumbo nucifera HOM05D002974 ORTHO05D002992 2.1e-08 63.2 132 40.2
ClCG05G026910 Citrullus lanatus HOM05D002974 ORTHO05D002992 2.8e-08 62.8 54 64.8
Aqoxy2G00396 Aquilegia oxysepala HOM05D002974 ORTHO05D002992 3.6e-08 62.4 68 55.9
THA.LOC104820144 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 3.6e-08 62.4 55 67.3
AUR62032633 Chenopodium quinoa HOM05D012416 ORTHO05D002992 4.7e-08 62.0 68 50.0
Lj3g0008937 Lotus japonicus HOM05D002974 ORTHO05D002992 4.7e-08 62.0 62 59.7
EL10Ac2g02772 Beta vulgaris HOM05D012416 ORTHO05D002992 6.2e-08 61.6 171 35.7
CsaV3_5G036860 Cucumis sativus L. HOM05D002974 ORTHO05D002992 6.2e-08 61.6 66 59.1
Sed0006618 Sechium edule HOM05D002974 ORTHO05D002992 6.2e-08 61.6 77 50.6
TAR633G1036 Trochodendron aralioides HOM05D002974 ORTHO05D002992 6.2e-08 61.6 66 56.1
Ah.10g030130 Amaranthus hybridus HOM05D002974 ORTHO05D002992 8.1e-08 61.2 66 51.5
THA.LOC109116532 Tarenaya hassleriana HOM05D002974 ORTHO05D002992 8.1e-08 61.2 73 54.8
CANSAT64G2862 Cannabis sativa HOM05D002974 ORTHO05D002992 1.4e-07 60.5 71 52.1
Cfa020005 Carpinus fangiana HOM05D002974 ORTHO05D002992 1.4e-07 60.5 159 34.6
Medtr3g013980 Medicago truncatula HOM05D002974 ORTHO05D002992 1.4e-07 60.5 78 46.2
Ciclev10002803m.g Citrus clementina HOM05D002974 ORTHO05D002992 1.8e-07 60.1 81 46.9
Cc06_g19310 Coffea canephora HOM05D002974 ORTHO05D002992 1.8e-07 60.1 47 63.8
Psat5g220360 Pisum sativum HOM05D002974 ORTHO05D002992 1.8e-07 60.1 87 43.7
Prupe.7G038200 Prunus persica HOM05D002974 ORTHO05D002992 1.8e-07 60.1 65 53.8
ECA234G2872 Erigeron canadensis HOM05D002974 ORTHO05D002992 2.3e-07 59.7 57 61.4
Lalb_Chr19g0133001 Lupinus albus HOM05D002974 ORTHO05D002992 2.3e-07 59.7 76 53.9
RcHm_v2.0_Chr2g0125651 Rosa chinensis HOM05D002974 ORTHO05D002992 3.1e-07 59.3 56 58.9
SGA_v2.0_scaffold43G16289 Striga asiatica HOM05D002974 ORTHO05D002992 3.1e-07 59.3 59 55.9
Glyma.04G134200 Glycine max HOM05D002974 ORTHO05D002992 4.0e-07 58.9 49 59.2
Lj3g0024515 Lotus japonicus HOM05D002974 ORTHO05D002992 4.0e-07 58.9 55 58.2
DCAR_013643 Daucus carota HOM05D002974 ORTHO05D002992 6.8e-07 58.2 39 74.4
PSO384G2085 Papaver somniferum HOM05D002974 ORTHO05D002992 6.8e-07 58.2 53 62.3
TPR.G31150 Trifolium pratense HOM05D002974 ORTHO05D002992 6.8e-07 58.2 74 48.6
Ca_12961_v3 Cicer arietinum L. HOM05D002974 ORTHO05D002992 8.9e-07 57.8 87 41.4
Haze_20227 Corylus avellana HOM05D002974 ORTHO05D002992 8.9e-07 57.8 56 60.7
Duzib106G0159 Durio zibethinus HOM05D002974 ORTHO05D002992 8.9e-07 57.8 95 43.2
MD14G1088500 Malus domestica HOM05D002974 ORTHO05D002992 8.9e-07 57.8 54 63.0
Sed0000723 Sechium edule HOM05D002974 ORTHO05D002992 8.9e-07 57.8 66 53.0
TPR.G22516 Trifolium pratense HOM05D002974 ORTHO05D002992 8.9e-07 57.8 39 71.8
DCAR_025326 Daucus carota HOM05D002974 ORTHO05D002992 1.2e-06 57.4 41 70.7
Psat4g145360 Pisum sativum HOM05D002974 ORTHO05D002992 1.2e-06 57.4 39 71.8
unitig_26.g9507 Utricularia gibba HOM05D002974 ORTHO05D002992 1.2e-06 57.4 56 55.4
CDE08G1203 Ceratophyllum demersum HOM05D002974 ORTHO05D002992 1.5e-06 57.0 60 53.3
AUR62018028 Chenopodium quinoa HOM05D052726 ORTHO05D002992 1.5e-06 57.0 58 53.4
AUR62043733 Chenopodium quinoa HOM05D052726 ORTHO05D002992 1.5e-06 57.0 58 53.4
Oeu059346.1 Olea europaea HOM05D002974 ORTHO05D002992 1.5e-06 57.0 83 41.0
QL07p010402 Quercus lobata HOM05D002974 ORTHO05D002992 1.5e-06 57.0 33 84.8
Thecc.05G134100 Theobroma cacao HOM05D002974 ORTHO05D002992 1.5e-06 57.0 92 41.3
VMungo1080G0254 Vigna mungo HOM05D002974 ORTHO05D002992 1.5e-06 57.0 49 57.1
Duzib128G1163 Durio zibethinus HOM05D002974 ORTHO05D002992 2.6e-06 56.2 33 81.8
FAN09G2803 Fragaria x ananassa HOM05D002974 ORTHO05D002992 3.4e-06 55.8 50 60.0
Medtr8g040080 Medicago truncatula HOM05D002974 ORTHO05D002992 3.4e-06 55.8 37 73.0
Nitab4.5_0004588g0030 Nicotiana tabacum HOM05D015198 ORTHO05D002992 3.4e-06 55.8 72 48.6
PSO339G5722 Papaver somniferum HOM05D002974 ORTHO05D002992 3.4e-06 55.8 53 60.4
CSS0033077 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 4.4e-06 55.5 45 62.2
Glyma.15G232200 Glycine max HOM05D002974 ORTHO05D002992 4.4e-06 55.5 63 54.0
Phvul.005G024800 Phaseolus vulgaris HOM05D002974 ORTHO05D002992 4.4e-06 55.5 74 47.3
SalBow6G5116 Salvia bowleyana HOM05D002974 ORTHO05D002992 4.4e-06 55.5 124 34.7
Atru.chr1.1439 Acer truncatum HOM05D002974 ORTHO05D002992 5.8e-06 55.1 46 63.0
MSTRG.26159 Avicennia marina HOM05D002974 ORTHO05D002992 5.8e-06 55.1 145 32.4
Lalb_Chr21g0315251 Lupinus albus HOM05D002974 ORTHO05D002992 5.8e-06 55.1 58 55.2
Oeu029509.1 Olea europaea HOM05D002974 ORTHO05D002992 5.8e-06 55.1 152 34.2
Potri.006G038900 Populus trichocarpa HOM05D002974 ORTHO05D002992 5.8e-06 55.1 85 42.4
Sed0014788 Sechium edule HOM05D002974 ORTHO05D002992 5.8e-06 55.1 48 58.3
Atru.chr12.1277 Acer truncatum HOM05D002974 ORTHO05D002992 7.6e-06 54.7 54 59.3
FvH4_6g25410 Fragaria vesca HOM05D002974 ORTHO05D002992 7.6e-06 54.7 50 60.0
FAN05G2143 Fragaria x ananassa HOM05D002974 ORTHO05D002992 7.6e-06 54.7 50 60.0
Glyma.13G193800 Glycine max HOM05D002974 ORTHO05D002992 7.6e-06 54.7 64 53.1
arahy.Tifrunner.gnm1.ann1.C03B5F Arachis hypogaea HOM05D002974 ORTHO05D002992 9.9e-06 54.3 32 84.4
CSS0001226 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 9.9e-06 54.3 79 43.0
CSS0032574 Camellia sinensis var. sinensis HOM05D002974 ORTHO05D002992 9.9e-06 54.3 79 43.0
Sabra16G0038800 Salix brachista HOM05D002974 ORTHO05D002992 9.9e-06 54.3 48 60.4


User provided reference genes

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