Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005803g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.7e-258 894.0 460 100.0
Nitab4.5_0004705g0010 Nicotiana tabacum HOM05D006903 ORTHO05D008655 4.0e-233 811.2 460 92.2
Sopen05g005730 Solanum pennellii HOM05D006903 ORTHO05D008655 2.8e-218 761.9 458 86.2
Peaxi162Scf00367g00739 Petunia axillaris HOM05D006903 ORTHO05D008655 9.3e-214 746.9 456 85.7
CAN.G184.79 Capsicum annuum HOM05D006903 ORTHO05D008655 3.5e-205 718.4 416 87.3
PGSC0003DMG400000822 Solanum tuberosum HOM05D006903 ORTHO05D008655 4.5e-184 648.3 373 87.1
Actinidia14845 Actinidia chinensis HOM05D006903 ORTHO05D008655 1.8e-172 609.8 463 69.1
Rhsim09G0113100 Rhododendron simsii HOM05D006903 ORTHO05D008655 5.2e-172 608.2 437 71.4
Migut.E00291 Erythranthe guttata HOM05D006903 ORTHO05D008655 1.7e-170 603.2 454 69.4
GSVIVG01011964001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.8e-170 601.7 442 69.7
Dinv16514 Davidia involucrata HOM05D006903 ORTHO05D008655 6.3e-170 601.3 415 73.7
CSS0045037 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.0e-167 594.0 415 73.3
Haze_17427 Corylus avellana HOM05D006903 ORTHO05D008655 6.8e-164 581.3 436 67.2
Haze_17428 Corylus avellana HOM05D006903 ORTHO05D008655 6.8e-164 581.3 436 67.2
Cc11_g10700 Coffea canephora HOM05D006903 ORTHO05D008655 7.5e-163 577.8 421 69.1
Oeu044621.1 Olea europaea HOM05D006903 ORTHO05D008655 7.5e-163 577.8 451 65.6
MD13G1047700 Malus domestica HOM05D006903 ORTHO05D008655 1.1e-161 573.9 452 66.4
QL01p001027 Quercus lobata HOM05D006903 ORTHO05D008655 2.4e-161 572.8 425 68.0
Lj3C1020T9 Lonicera japonica HOM05D006903 ORTHO05D008655 1.0e-159 567.4 469 66.3
DCAR_030091 Daucus carota HOM05D006903 ORTHO05D008655 1.3e-159 567.0 436 67.7
FAN12G3275 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-159 566.6 429 68.1
CANSAT64G1629 Cannabis sativa HOM05D006903 ORTHO05D008655 2.9e-159 565.8 425 66.4
Eucgr.G02357 Eucalyptus grandis HOM05D006903 ORTHO05D008655 2.9e-159 565.8 432 67.1
Prupe.1G304300 Prunus persica HOM05D006903 ORTHO05D008655 2.9e-159 565.8 438 66.2
RcHm_v2.0_Chr4g0435961 Rosa chinensis HOM05D006903 ORTHO05D008655 8.5e-159 564.3 448 65.2
FvH4_4g28200 Fragaria vesca HOM05D006903 ORTHO05D008655 1.1e-158 563.9 429 67.6
FAN22G1870 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.6e-157 560.1 411 70.3
SalBow8G1412 Salvia bowleyana HOM05D006903 ORTHO05D008655 2.1e-157 559.7 451 66.1
CsaV3_5G033920 Cucumis sativus L. HOM05D006903 ORTHO05D008655 2.3e-156 556.2 435 65.1
Cpa.g.sc1.226 Carica papaya HOM05D006903 ORTHO05D008655 9.8e-155 550.8 405 69.4
Duzib248G0677 Durio zibethinus HOM05D006903 ORTHO05D008655 1.4e-153 547.0 439 65.4
CiPaw.16G002500 Carya illinoinensis HOM05D006903 ORTHO05D008655 1.2e-152 543.9 391 70.1
Sed0022387 Sechium edule HOM05D006903 ORTHO05D008655 5.9e-152 541.6 446 62.1
Sc04g0006770 Simmondsia chinensis HOM05D006903 ORTHO05D008655 1.0e-151 540.8 422 65.4
FAN17G3035 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.7e-151 540.0 409 68.2
Sabra10G0099600 Salix brachista HOM05D006903 ORTHO05D008655 2.9e-151 539.3 427 65.3
HanXRQChr15g0476011 Helianthus annuus HOM05D006903 ORTHO05D008655 1.5e-150 537.0 425 64.7
PGR119G0052 Punica granatum HOM05D006903 ORTHO05D008655 1.5e-150 537.0 404 65.8
Hund05771 Selenicereus undatus HOM05D006903 ORTHO05D008655 4.3e-150 535.4 456 61.4
Lsat_1_v5_gn_3_58300 Lactuca sativa HOM05D006903 ORTHO05D008655 1.6e-149 533.5 431 64.7
Potri.010G130700 Populus trichocarpa HOM05D006903 ORTHO05D008655 2.1e-149 533.1 445 63.8
AUR62002930 Chenopodium quinoa HOM05D006903 ORTHO05D008655 4.7e-149 531.9 461 60.3
FAN07G2589 Fragaria x ananassa HOM05D006903 ORTHO05D008655 1.0e-148 530.8 414 66.9
Lj2g0014822 Lotus japonicus HOM05D006903 ORTHO05D008655 1.0e-148 530.8 411 66.4
Nn3g17696 Nelumbo nucifera HOM05D006903 ORTHO05D008655 5.7e-147 525.0 468 60.3
Ca_26576_v3 Cicer arietinum L. HOM05D006903 ORTHO05D008655 9.8e-147 524.2 412 65.8
Phvul.003G026200 Phaseolus vulgaris HOM05D006903 ORTHO05D008655 1.7e-146 523.5 421 63.2
Glyma.02G101000 Glycine max HOM05D006903 ORTHO05D008655 2.2e-146 523.1 400 67.2
ClCG05G023070 Citrullus lanatus HOM05D006903 ORTHO05D008655 6.4e-146 521.5 483 58.0
MELO3C012210.2 Cucumis melo HOM05D006903 ORTHO05D008655 6.4e-146 521.5 441 62.4
VMungo1215G2648 Vigna mungo HOM05D006903 ORTHO05D008655 6.4e-146 521.5 421 63.4
EL10Ac6g14516 Beta vulgaris HOM05D006903 ORTHO05D008655 8.3e-146 521.2 461 59.4
Medtr5g053280 Medicago truncatula HOM05D006903 ORTHO05D008655 8.3e-146 521.2 428 62.4
A08p27120 Brassica napus HOM05D006903 ORTHO05D008655 2.4e-145 519.6 456 59.2
BraA08t34657Z Brassica rapa HOM05D006903 ORTHO05D008655 3.2e-145 519.2 456 59.4
arahy.Tifrunner.gnm1.ann1.9PC4TR Arachis hypogaea HOM05D006903 ORTHO05D008655 5.9e-144 515.0 444 61.5
Aqoxy3G00382 Aquilegia oxysepala HOM05D006903 ORTHO05D008655 3.9e-143 512.3 454 60.8
Gorai.005G137600 Gossypium raimondii HOM05D006903 ORTHO05D008655 3.9e-143 512.3 443 62.1
arahy.Tifrunner.gnm1.ann1.RDH5GK Arachis hypogaea HOM05D006903 ORTHO05D008655 6.6e-143 511.5 444 61.0
BolC3t19572H Brassica oleracea HOM05D006903 ORTHO05D008655 6.6e-143 511.5 458 59.0
COL.COLO4_07859 Corchorus olitorius HOM05D006903 ORTHO05D008655 2.5e-142 509.6 443 61.2
C03p72740 Brassica napus HOM05D006903 ORTHO05D008655 4.3e-142 508.8 458 58.5
PSO478G5279 Papaver somniferum HOM05D006903 ORTHO05D008655 4.3e-142 508.8 407 61.7
Aa31LG7G8910 Aethionema arabicum HOM05D006903 ORTHO05D008655 2.8e-141 506.1 443 59.8
ECA246G0069 Erigeron canadensis HOM05D006903 ORTHO05D008655 8.0e-141 504.6 376 68.9
AL1G39690 Arabidopsis lyrata HOM05D006903 ORTHO05D008655 1.0e-140 504.2 438 59.1
Lalb_Chr04g0254991 Lupinus albus HOM05D006903 ORTHO05D008655 2.3e-140 503.1 400 65.0
AT1G26090 Arabidopsis thaliana HOM05D006903 ORTHO05D008655 8.9e-140 501.1 466 57.3
Carub.0001s2488 Capsella rubella HOM05D006903 ORTHO05D008655 2.6e-139 499.6 465 57.8
Thhalv10007585m.g Eutrema salsugineum HOM05D006903 ORTHO05D008655 2.6e-139 499.6 469 57.6
Sp1g22600 Schrenkiella parvula HOM05D006903 ORTHO05D008655 3.4e-139 499.2 442 58.6
Cfa018642 Carpinus fangiana HOM05D006903 ORTHO05D008655 2.9e-138 496.1 436 60.1
Ciclev10033640m.g Citrus clementina HOM05D006903 ORTHO05D008655 4.9e-138 495.4 427 61.6
MBI10_g08549_MAGBIO Magnolia biondii HOM05D006903 ORTHO05D008655 3.2e-137 492.7 410 61.0
CARHR025840 Cardamine hirsuta HOM05D006903 ORTHO05D008655 4.1e-137 492.3 441 58.7
unitig_62.g23710 Utricularia gibba HOM05D006903 ORTHO05D008655 4.1e-137 492.3 496 55.0
TPR.G22411 Trifolium pratense HOM05D006903 ORTHO05D008655 4.6e-136 488.8 380 66.1
ATR0053G028 Amborella trichopoda HOM05D006903 ORTHO05D008655 8.3e-130 468.0 408 59.6
Solyc05g009920.4 Solanum lycopersicum HOM05D006903 ORTHO05D008655 1.9e-129 466.8 291 85.9
BcaB03g12083 Brassica carinata HOM05D006903 ORTHO05D008655 5.4e-129 465.3 411 59.1
TWI31G1007 Tripterygium wilfordii HOM05D006903 ORTHO05D008655 1.3e-127 460.7 360 66.1
AUR62007740 Chenopodium quinoa HOM05D006903 ORTHO05D008655 6.8e-124 448.4 433 56.4
SGA_v2.0_scaffold14G06815 Striga asiatica HOM05D006903 ORTHO05D008655 9.9e-123 444.5 333 67.3
Atru.chr11.1372 Acer truncatum HOM05D006903 ORTHO05D008655 1.3e-122 444.1 331 68.6
PSO017G3486 Papaver somniferum HOM05D006903 ORTHO05D008655 5.6e-118 428.7 354 59.3
Manes.06G073100 Manihot esculenta HOM05D006903 ORTHO05D008655 3.8e-114 416.0 331 66.2
Ah.03g137980 Amaranthus hybridus HOM05D006903 ORTHO05D008655 7.1e-113 411.8 458 51.3
Zm00001eb252440 Zea mays HOM05D006903 ORTHO05D008655 3.0e-111 406.4 397 52.4
Psat0s629g0200 Pisum sativum HOM05D006903 ORTHO05D008655 4.8e-109 399.1 329 62.9
vmacro10523 Vaccinium macrocarpon HOM05D006903 ORTHO05D008655 1.4e-108 397.5 554 45.1
Hma1.2p1_0406F.1_g145980 Hydrangea macrophylla HOM05D006903 ORTHO05D008655 4.0e-108 396.0 294 70.4
Thecc.02G362300 Theobroma cacao HOM05D006903 ORTHO05D008655 2.8e-101 373.2 295 64.4
SEGI_13133 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 5.3e-100 369.0 384 52.6
AagrBONN_evm.TU.Sc2ySwM_117.1113 Anthoceros agrestis HOM05D006903 ORTHO05D008655 1.5e-99 367.5 429 46.9
TAR629G3475 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.9e-98 363.2 294 62.2
Gohir.A03G097100 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.2e-96 357.8 303 63.0
Gohir.D02G116200 Gossypium hirsutum HOM05D006903 ORTHO05D008655 1.2e-96 357.8 303 62.7
Mapoly0088s0003 Marchantia polymorpha HOM05D006903 ORTHO05D008655 1.0e-95 354.8 442 44.1
Pp3c6_9390 Physcomitrium patens HOM05D006903 ORTHO05D008655 1.9e-94 350.5 407 45.7
HanXRQChr00c0584g0576181 Helianthus annuus HOM05D006903 ORTHO05D008655 2.2e-90 337.0 242 69.8
SEGI_18137 Sequoiadendron giganteum HOM05D006903 ORTHO05D008655 3.0e-87 326.6 331 53.2
SMO367G1048 Selaginella moellendorffii HOM05D006903 ORTHO05D008655 4.5e-83 312.8 432 41.4
HPP92_003072 Vanilla planifolia HOM05D006903 ORTHO05D008655 6.7e-55 219.2 289 43.6
GSVIVG01021676001 Vitis vinifera HOM05D006903 ORTHO05D008655 1.2e-54 218.4 144 74.3
Os02g0711200 Oryza sativa ssp. japonica HOM05D006903 ORTHO05D008655 2.2e-50 204.1 165 61.2
CSS0042654 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 4.0e-47 193.4 147 70.1
HPP92_003073 Vanilla planifolia HOM05D006903 ORTHO05D008655 2.1e-40 171.0 167 55.7
GSVIVG01031030001 Vitis vinifera HOM05D006903 ORTHO05D008655 4.1e-36 156.8 109 69.7
Potri.008G115401 Populus trichocarpa HOM05D006903 ORTHO05D008655 1.6e-35 154.8 154 53.2
Glyma.01G089202 Glycine max HOM05D006903 ORTHO05D008655 3.8e-34 150.2 145 53.1
GSVIVG01021677001 Vitis vinifera HOM05D006903 ORTHO05D008655 6.8e-31 139.4 96 70.8
CSS0002023 Camellia sinensis var. sinensis HOM05D006903 ORTHO05D008655 1.3e-29 135.2 123 63.4
HanXRQChr00c0584g0576191 Helianthus annuus HOM05D006903 ORTHO05D008655 1.7e-26 124.8 104 58.7
TAR629G0855 Trochodendron aralioides HOM05D006903 ORTHO05D008655 3.0e-26 124.0 118 56.8
TAR626G1973 Trochodendron aralioides HOM05D006903 ORTHO05D008655 2.5e-25 120.9 91 62.6
GSVIVG01031031001 Vitis vinifera HOM05D006903 ORTHO05D008655 2.5e-09 67.8 50 66.0
CSS0033674 Camellia sinensis var. sinensis HOM05D050661 ORTHO05D112259 8.1e-08 62.8 47 66.0


User provided reference genes

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