Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005781g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-111 406.4 201 100.0
Nitab4.5_0004443g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-89 333.6 211 80.6
Nitab4.5_0002753g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.8e-87 325.1 208 80.8
Nitab4.5_0001488g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.5e-87 324.3 200 79.5
Nitab4.5_0005746g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-84 317.0 224 73.7
Nitab4.5_0011951g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.7e-83 311.2 200 79.5
Nitab4.5_0000025g0270 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-81 307.0 212 72.6
Nitab4.5_0004091g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-81 307.0 212 74.5
Nitab4.5_0000782g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.5e-79 297.7 211 71.6
Nitab4.5_0001106g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.2e-78 295.4 211 73.5
Nitab4.5_0000095g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.2e-78 294.3 197 75.6
Nitab4.5_0003370g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-77 293.5 211 71.6
Nitab4.5_0003145g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-74 283.5 212 71.2
Nitab4.5_0002145g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-74 282.3 197 74.6
Nitab4.5_0006574g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.8e-74 281.6 203 74.4
Nitab4.5_0002782g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.2e-71 272.7 188 75.0
Nitab4.5_0000707g0210 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.8e-68 261.2 212 65.6
Nitab4.5_0000843g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-67 260.4 199 70.9
Nitab4.5_0002386g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.7e-66 255.4 196 69.4
Nitab4.5_0001861g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.0e-64 249.6 179 72.6
Nitab4.5_0001781g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.7e-64 249.2 197 66.5
Nitab4.5_0003611g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.2e-61 240.4 159 77.4
Nitab4.5_0004193g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-59 233.4 176 70.5
Nitab4.5_0000188g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.5e-59 231.1 188 62.2
Nitab4.5_0006902g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.9e-56 221.5 160 69.4
Nitab4.5_0002791g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.8e-53 212.6 159 70.4
Nitab4.5_0009228g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.8e-51 204.1 109 92.7
Nitab4.5_0003463g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-49 199.5 211 56.9
Nitab4.5_0000583g0300 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.1e-49 198.7 147 73.5
Nitab4.5_0001031g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 8.6e-47 191.0 159 65.4
Nitab4.5_0006745g0050 Nicotiana tabacum HOM05D000045 ORTHO05D002701 9.5e-46 187.6 199 55.8
Nitab4.5_0004798g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.2e-45 187.2 144 67.4
Nitab4.5_0004221g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-39 167.5 191 55.5
Nitab4.5_0000136g0230 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.6e-39 164.5 124 71.8
Nitab4.5_0000669g0150 Nicotiana tabacum HOM05D000045 ORTHO05D002701 8.6e-39 164.5 113 71.7
Nitab4.5_0013768g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.7e-37 158.7 114 70.2
Nitab4.5_0014556g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.4e-35 152.1 86 79.1
Nitab4.5_0001432g0080 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-34 150.2 99 77.8
Nitab4.5_0008386g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-34 148.7 87 77.0
Nitab4.5_0001957g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.0e-32 141.7 175 50.9
Nitab4.5_0000585g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.8e-32 141.4 99 76.8
Nitab4.5_0002309g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.6e-30 135.2 208 40.4
Nitab4.5_0005934g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.1e-29 133.3 96 67.7
Nitab4.5_0000082g0390 Nicotiana tabacum HOM05D000045 ORTHO05D002701 6.2e-29 131.7 72 80.6
Nitab4.5_0000092g0160 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.6e-27 124.8 107 61.7
Nitab4.5_0000149g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 7.6e-27 124.8 76 82.9
Nitab4.5_0000127g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.2e-26 123.2 158 48.1
Nitab4.5_0000391g0230 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.9e-26 122.9 94 68.1
Nitab4.5_0004219g0020 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.9e-26 122.9 212 40.1
Nitab4.5_0013768g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-25 120.9 69 85.5
Nitab4.5_0001955g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-25 120.6 83 74.7
Nitab4.5_0001969g0100 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.2e-25 119.4 217 38.2
Nitab4.5_0003881g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.2e-25 119.0 212 37.7
Nitab4.5_0000260g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.0e-23 114.4 176 40.3
Nitab4.5_0005934g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 8.7e-23 111.3 70 80.0
Nitab4.5_0008386g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.3e-22 109.4 58 94.8
Nitab4.5_0000987g0070 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.7e-21 105.5 115 46.1
Nitab4.5_0000216g0280 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-20 104.0 114 45.6
Nitab4.5_0001021g0150 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-20 104.0 114 46.5
Nitab4.5_0003803g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.4e-20 104.0 174 36.2
Nitab4.5_0000043g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.5e-19 100.5 86 53.5
Nitab4.5_0005287g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.6e-19 99.8 162 39.5
Nitab4.5_0001246g0030 Nicotiana tabacum HOM05D000045 ORTHO05D002701 4.4e-19 99.0 171 38.0
Nitab4.5_0001168g0180 Nicotiana tabacum HOM05D000045 ORTHO05D002701 9.9e-19 97.8 114 47.4
Nitab4.5_0002128g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-18 97.1 172 37.8
Nitab4.5_0007742g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.7e-18 97.1 96 50.0
Nitab4.5_0004837g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.2e-18 96.7 113 43.4
Nitab4.5_0003552g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.9e-18 95.5 95 48.4
Nitab4.5_0002333g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.4e-17 93.2 173 39.9
Nitab4.5_0002352g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.4e-17 92.0 87 49.4
Nitab4.5_0000108g0430 Nicotiana tabacum HOM05D004033 ORTHO05D002701 3.5e-16 89.4 83 48.2
Nitab4.5_0001727g0190 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.6e-16 89.0 114 42.1
Nitab4.5_0012426g0040 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-15 87.4 155 41.9
Nitab4.5_0011485g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.3e-15 86.7 159 37.7
Nitab4.5_0001219g0110 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-14 84.3 87 56.3
Nitab4.5_0003657g0010 Nicotiana tabacum HOM05D000045 ORTHO05D002701 1.1e-14 84.3 99 43.4
Sopen07g021170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-14 84.0 83 59.0
Nitab4.5_0008840g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.3e-13 80.9 153 34.0
Nitab4.5_0004232g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.2e-13 78.6 80 47.5
Nitab4.5_0002211g0170 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.8e-12 77.0 94 43.6
Nitab4.5_0003351g0140 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.5e-11 72.4 79 43.0
Nitab4.5_0012491g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.5e-11 72.4 78 44.9
Sopen07g021180 Solanum pennellii HOM05D000006 ORTHO05D000001 2.9e-10 69.7 73 56.2
Nitab4.5_0008768g0030 Nicotiana tabacum HOM05D004033 ORTHO05D002701 1.1e-09 67.8 153 36.6
Nitab4.5_0004465g0080 Nicotiana tabacum HOM05D000045 ORTHO05D002701 2.4e-09 66.6 66 57.6
Migut.M00234 Erythranthe guttata HOM05D000045 ORTHO05D000067 9.3e-09 64.7 83 34.9
Nitab4.5_0001569g0200 Nicotiana tabacum HOM05D004033 ORTHO05D002701 9.3e-09 64.7 114 35.1
Aqoxy6G02399 Aquilegia oxysepala HOM05D000045 ORTHO05D000067 1.2e-08 64.3 147 34.7
Migut.A01062 Erythranthe guttata HOM05D000045 ORTHO05D000067 1.6e-08 63.9 83 36.1
CAN.G14674.1 Capsicum annuum HOM05D004033 ORTHO05D002701 2.1e-08 63.5 79 40.5
CAN.G490.39 Capsicum annuum HOM05D000045 ORTHO05D002701 2.1e-08 63.5 177 31.1
CAN.G1700.1 Capsicum annuum HOM05D004033 ORTHO05D002701 3.5e-08 62.8 79 40.5
Nitab4.5_0000440g0060 Nicotiana tabacum HOM05D004033 ORTHO05D002701 6.0e-08 62.0 103 38.8
SGA_v2.0_scaffold68G22942 Striga asiatica HOM05D000045 ORTHO05D002701 8.7e-07 58.2 102 34.3
CAN.G739.5 Capsicum annuum HOM05D004033 ORTHO05D002701 1.5e-06 57.4 88 35.2
PSO017G1702 Papaver somniferum HOM05D000045 ORTHO05D000067 1.5e-06 57.4 85 38.8
Nitab4.5_0009727g0020 Nicotiana tabacum HOM05D004033 ORTHO05D002701 2.5e-06 56.6 164 29.9
Nitab4.5_0024535g0010 Nicotiana tabacum HOM05D004033 ORTHO05D002701 4.3e-06 55.8 54 59.3
SGA_v2.0_scaffold2874G54232 Striga asiatica HOM05D000045 ORTHO05D002701 4.3e-06 55.8 101 33.7
CSS0047537 Camellia sinensis var. sinensis HOM05D000045 ORTHO05D000067 5.6e-06 55.5 117 35.0
CAN.G485.6 Capsicum annuum HOM05D004033 ORTHO05D002701 5.6e-06 55.5 93 41.9
Nitab4.5_0006220g0050 Nicotiana tabacum HOM05D004033 ORTHO05D002701 5.6e-06 55.5 95 36.8


User provided reference genes

Program Settings