Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005777g0070 Nicotiana tabacum HOM05D004394 ORTHO05D005208 2.1e-67 258.8 126 100.0
Nitab4.5_0000232g0200 Nicotiana tabacum HOM05D004394 ORTHO05D005208 8.0e-51 203.8 114 89.5
Solyc04g074150.3 Solanum lycopersicum HOM05D004394 ORTHO05D005208 1.5e-49 199.5 114 86.8
Sopen04g029330 Solanum pennellii HOM05D004394 ORTHO05D005208 1.5e-49 199.5 114 86.8
PGSC0003DMG400006413 Solanum tuberosum HOM05D004394 ORTHO05D005208 2.0e-49 199.1 114 86.8
Peaxi162Scf00041g00179 Petunia axillaris HOM05D004394 ORTHO05D005208 5.8e-49 197.6 114 82.5
CAN.G101.27 Capsicum annuum HOM05D004394 ORTHO05D005208 4.1e-47 191.4 114 84.2
Oeu046302.1 Olea europaea HOM05D004394 ORTHO05D005208 7.3e-44 180.6 114 77.2
MBI05_g37052_MAGBIO Magnolia biondii HOM05D004394 ORTHO05D005208 9.5e-44 180.3 114 75.4
SalBow7G3516 Salvia bowleyana HOM05D004394 ORTHO05D005208 1.6e-43 179.5 114 74.6
SGA_v2.0_scaffold24G10492 Striga asiatica HOM05D004394 ORTHO05D005208 1.6e-43 179.5 114 77.2
ClCG08G011100 Citrullus lanatus HOM05D004394 ORTHO05D005208 2.1e-43 179.1 114 75.4
Migut.C01173 Erythranthe guttata HOM05D004394 ORTHO05D005208 2.1e-43 179.1 114 77.2
SalBow7G2639 Salvia bowleyana HOM05D004394 ORTHO05D005208 2.8e-43 178.7 114 74.6
Manes.08G094000 Manihot esculenta HOM05D004394 ORTHO05D005208 6.2e-43 177.6 114 75.4
Sabra02G0076100 Salix brachista HOM05D004394 ORTHO05D005208 6.2e-43 177.6 114 75.4
Oeu012929.1 Olea europaea HOM05D004394 ORTHO05D005208 8.1e-43 177.2 114 75.4
MELO3C011026.2 Cucumis melo HOM05D004394 ORTHO05D005208 1.1e-42 176.8 114 75.4
Cc10_g07190 Coffea canephora HOM05D004394 ORTHO05D005208 1.4e-42 176.4 114 76.3
Potri.002G096600 Populus trichocarpa HOM05D004394 ORTHO05D005208 1.4e-42 176.4 114 74.6
unitig_899.g14554 Utricularia gibba HOM05D000298 ORTHO05D000553 1.4e-42 176.4 114 74.6
CiPaw.08G045200 Carya illinoinensis HOM05D004394 ORTHO05D005208 2.3e-42 175.6 114 73.7
CsaV3_2G029680 Cucumis sativus L. HOM05D004394 ORTHO05D005208 3.1e-42 175.3 114 75.4
Ciclev10003351m.g Citrus clementina HOM05D004394 ORTHO05D005208 6.8e-42 174.1 115 74.8
Lsat_1_v5_gn_2_108521 Lactuca sativa HOM05D004394 ORTHO05D005208 6.8e-42 174.1 115 74.8
CSS0017732 Camellia sinensis var. sinensis HOM05D004394 ORTHO05D005208 1.2e-41 173.3 114 71.9
MD08G1182900 Malus domestica HOM05D004394 ORTHO05D005208 1.2e-41 173.3 114 71.9
QL12p036785 Quercus lobata HOM05D004394 ORTHO05D005208 1.2e-41 173.3 114 71.1
Atru.chr13.1186 Acer truncatum HOM05D004394 ORTHO05D005208 1.5e-41 172.9 115 73.0
Aqoxy6G00782 Aquilegia oxysepala HOM05D004394 ORTHO05D005208 1.5e-41 172.9 114 72.8
Potri.005G165000 Populus trichocarpa HOM05D004394 ORTHO05D005208 1.5e-41 172.9 114 71.9
MSTRG.25920 Avicennia marina HOM05D004394 ORTHO05D005208 2.0e-41 172.6 105 75.2
Haze_22268 Corylus avellana HOM05D004394 ORTHO05D005208 2.0e-41 172.6 114 71.9
GSVIVG01032524001 Vitis vinifera HOM05D004394 ORTHO05D005208 2.0e-41 172.6 114 70.2
TAR376G0181 Trochodendron aralioides HOM05D004394 ORTHO05D005208 2.6e-41 172.2 114 71.1
Nn2g12152 Nelumbo nucifera HOM05D004394 ORTHO05D005208 3.4e-41 171.8 114 70.2
Prupe.1G517100 Prunus persica HOM05D004394 ORTHO05D005208 3.4e-41 171.8 114 71.1
Psat2g179880 Pisum sativum HOM05D004394 ORTHO05D005208 4.4e-41 171.4 114 71.9
Cfa013636 Carpinus fangiana HOM05D004394 ORTHO05D005208 7.5e-41 170.6 114 71.1
Dinv36547 Davidia involucrata HOM05D004394 ORTHO05D005208 7.5e-41 170.6 114 72.8
FvH4_5g37330 Fragaria vesca HOM05D004394 ORTHO05D005208 7.5e-41 170.6 114 71.9
FAN18G2812 Fragaria x ananassa HOM05D004394 ORTHO05D005208 7.5e-41 170.6 114 71.9
FAN08G2022 Fragaria x ananassa HOM05D004394 ORTHO05D005208 9.8e-41 170.2 114 71.9
MD15G1369300 Malus domestica HOM05D004394 ORTHO05D005208 1.3e-40 169.9 114 70.2
PGR042G0728 Punica granatum HOM05D004394 ORTHO05D005208 1.7e-40 169.5 114 71.1
EL10Ac5g11858 Beta vulgaris HOM05D004394 ORTHO05D005208 2.2e-40 169.1 114 70.2
AUR62036356 Chenopodium quinoa HOM05D004394 ORTHO05D005208 2.2e-40 169.1 114 70.2
Eucgr.D01128 Eucalyptus grandis HOM05D004394 ORTHO05D005208 2.2e-40 169.1 114 72.8
Nn5g30107 Nelumbo nucifera HOM05D004394 ORTHO05D005208 2.2e-40 169.1 114 68.4
Ca_08121_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 3.7e-40 168.3 114 70.2
TPR.G10620 Trifolium pratense HOM05D004394 ORTHO05D005208 3.7e-40 168.3 114 71.1
TPR.G17517 Trifolium pratense HOM05D004394 ORTHO05D005208 3.7e-40 168.3 114 71.9
Atru.chr5.2725 Acer truncatum HOM05D004394 ORTHO05D005208 4.9e-40 167.9 115 72.2
FAN13G1242 Fragaria x ananassa HOM05D004394 ORTHO05D005208 4.9e-40 167.9 114 71.1
Hma1.2p1_0575F.1_g181580 Hydrangea macrophylla HOM05D004394 ORTHO05D005208 4.9e-40 167.9 114 70.2
Psat1g170200 Pisum sativum HOM05D004394 ORTHO05D005208 4.9e-40 167.9 114 70.2
QL03p027611 Quercus lobata HOM05D004394 ORTHO05D005208 4.9e-40 167.9 115 70.4
TWI36G1364 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 4.9e-40 167.9 115 70.4
Ah.12g059310 Amaranthus hybridus HOM05D004394 ORTHO05D005208 6.4e-40 167.5 114 69.3
CANSAT80G0901 Cannabis sativa HOM05D004394 ORTHO05D005208 6.4e-40 167.5 114 69.3
Ca_20267_v3 Cicer arietinum L. HOM05D004394 ORTHO05D005208 6.4e-40 167.5 114 69.3
ECA238G4620 Erigeron canadensis HOM05D004394 ORTHO05D005208 6.4e-40 167.5 115 71.3
Medtr2g028730 Medicago truncatula HOM05D004394 ORTHO05D005208 6.4e-40 167.5 114 71.1
RcHm_v2.0_Chr7g0238971 Rosa chinensis HOM05D004394 ORTHO05D005208 8.3e-40 167.2 114 72.8
Actinidia10324 Actinidia chinensis HOM05D004394 ORTHO05D005208 1.4e-39 166.4 114 71.1
AUR62030717 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.4e-39 166.4 114 69.3
THA.LOC104800150 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 1.4e-39 166.4 116 71.6
TAR628G0041 Trochodendron aralioides HOM05D004394 ORTHO05D005208 1.4e-39 166.4 114 66.7
Sp1g19780 Schrenkiella parvula HOM05D004394 ORTHO05D005208 1.9e-39 166.0 117 72.6
Lalb_Chr08g0242051 Lupinus albus HOM05D004394 ORTHO05D005208 2.4e-39 165.6 114 68.4
VMungo0720G0524 Vigna mungo HOM05D004394 ORTHO05D005208 2.4e-39 165.6 114 69.3
Glyma.20G173300 Glycine max HOM05D004394 ORTHO05D005208 3.2e-39 165.2 114 68.4
Medtr1g050345 Medicago truncatula HOM05D004394 ORTHO05D005208 3.2e-39 165.2 107 70.1
EL10Ac1g01214 Beta vulgaris HOM05D004394 ORTHO05D005208 4.1e-39 164.9 105 71.4
C07p21470 Brassica napus HOM05D004394 ORTHO05D005208 4.1e-39 164.9 122 69.7
BraA07t29204Z Brassica rapa HOM05D004394 ORTHO05D005208 4.1e-39 164.9 117 72.6
Gohir.D06G036200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 4.1e-39 164.9 116 72.4
Gorai.010G040200 Gossypium raimondii HOM05D004394 ORTHO05D005208 4.1e-39 164.9 116 72.4
Phvul.002G138800 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 4.1e-39 164.9 105 72.4
CDE06G0322 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 5.4e-39 164.5 114 66.7
Phvul.007G087400 Phaseolus vulgaris HOM05D004394 ORTHO05D005208 5.4e-39 164.5 114 68.4
Sabra05G0124400 Salix brachista HOM05D004394 ORTHO05D005208 5.4e-39 164.5 114 68.4
A07p14580 Brassica napus HOM05D004394 ORTHO05D005208 7.1e-39 164.1 117 71.8
BcaC06g34947 Brassica carinata HOM05D004394 ORTHO05D005208 9.2e-39 163.7 117 71.8
BolC7t42673H Brassica oleracea HOM05D004394 ORTHO05D005208 9.2e-39 163.7 117 71.8
Lalb_Chr11g0065431 Lupinus albus HOM05D004394 ORTHO05D005208 1.2e-38 163.3 114 69.3
TWI12G1259 Tripterygium wilfordii HOM05D004394 ORTHO05D005208 1.2e-38 163.3 115 70.4
BcaB03g14221 Brassica carinata HOM05D004394 ORTHO05D005208 1.6e-38 162.9 106 76.4
HanXRQChr07g0194691 Helianthus annuus HOM05D004394 ORTHO05D005208 1.6e-38 162.9 115 67.8
Sed0012623 Sechium edule HOM05D004394 ORTHO05D005208 1.6e-38 162.9 114 69.3
Gohir.A06G035600 Gossypium hirsutum HOM05D004394 ORTHO05D005208 2.1e-38 162.5 116 71.6
COL.COLO4_16398 Corchorus olitorius HOM05D004394 ORTHO05D005208 2.7e-38 162.2 116 70.7
PSO781G0205 Papaver somniferum HOM05D004394 ORTHO05D005208 2.7e-38 162.2 105 70.5
CDE02G1736 Ceratophyllum demersum HOM05D004394 ORTHO05D005208 3.5e-38 161.8 114 64.9
THA.LOC104809715 Tarenaya hassleriana HOM05D004394 ORTHO05D005208 3.5e-38 161.8 116 70.7
CANSAT80G2869 Cannabis sativa HOM05D004394 ORTHO05D005208 4.6e-38 161.4 105 67.6
Duzib041G0085 Durio zibethinus HOM05D004394 ORTHO05D005208 4.6e-38 161.4 116 70.7
PSO541G5821 Papaver somniferum HOM05D004394 ORTHO05D005208 4.6e-38 161.4 105 70.5
ATR0782G020 Amborella trichopoda HOM05D004394 ORTHO05D005208 6.0e-38 161.0 114 67.5
DCAR_008736 Daucus carota HOM05D004394 ORTHO05D005208 6.0e-38 161.0 115 68.7
Thecc.08G106700 Theobroma cacao HOM05D004394 ORTHO05D005208 6.0e-38 161.0 116 70.7
HanXRQChr04g0126451 Helianthus annuus HOM05D004394 ORTHO05D005208 7.8e-38 160.6 115 67.0
CARHR022650 Cardamine hirsuta HOM05D004394 ORTHO05D005208 1.0e-37 160.2 116 70.7
Lj2g0026973 Lotus japonicus HOM05D004394 ORTHO05D005208 1.0e-37 160.2 114 67.5
BcaB07g32248 Brassica carinata HOM05D004394 ORTHO05D005208 1.3e-37 159.8 123 67.5
Thhalv10009116m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 1.3e-37 159.8 117 69.2
BolC5t30836H Brassica oleracea HOM05D004394 ORTHO05D005208 1.7e-37 159.5 111 68.5
Nn4g22250 Nelumbo nucifera HOM05D004394 ORTHO05D005208 1.7e-37 159.5 105 66.7
Actinidia30773 Actinidia chinensis HOM05D004394 ORTHO05D005208 2.3e-37 159.1 114 66.7
Cpa.g.sc53.145 Carica papaya HOM05D004394 ORTHO05D005208 2.3e-37 159.1 115 69.6
AL1G35720 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 3.0e-37 158.7 116 69.0
Carub.0001s2182 Capsella rubella HOM05D004394 ORTHO05D005208 3.0e-37 158.7 116 69.8
AUR62027759 Chenopodium quinoa HOM05D004394 ORTHO05D005208 3.0e-37 158.7 114 65.8
Glyma.10G218300 Glycine max HOM05D004394 ORTHO05D005208 3.0e-37 158.7 114 65.8
Sc01g0000460 Simmondsia chinensis HOM05D004394 ORTHO05D005208 6.6e-37 157.5 114 65.8
A09p42510 Brassica napus HOM05D004394 ORTHO05D005208 1.1e-36 156.8 119 67.2
BraA09t39727Z Brassica rapa HOM05D004394 ORTHO05D005208 1.1e-36 156.8 119 67.2
AT1G22270 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 1.5e-36 156.4 116 68.1
BcaC05g26154 Brassica carinata HOM05D004394 ORTHO05D005208 2.5e-36 155.6 118 66.1
C05p21390 Brassica napus HOM05D004394 ORTHO05D005208 2.5e-36 155.6 118 66.1
CARHR071660 Cardamine hirsuta HOM05D004394 ORTHO05D005208 2.5e-36 155.6 116 66.4
Duzib093G0332 Durio zibethinus HOM05D004394 ORTHO05D005208 3.3e-36 155.2 116 67.2
Rhsim06G0082000 Rhododendron simsii HOM05D004394 ORTHO05D005208 3.3e-36 155.2 108 69.4
Sp5g33330 Schrenkiella parvula HOM05D004394 ORTHO05D005208 3.3e-36 155.2 107 71.0
Cpa.g.sc36.132 Carica papaya HOM05D004394 ORTHO05D005208 7.3e-36 154.1 115 68.7
Duzib093G1861 Durio zibethinus HOM05D004394 ORTHO05D005208 7.3e-36 154.1 116 66.4
Thhalv10019322m.g Eutrema salsugineum HOM05D004394 ORTHO05D005208 1.2e-35 153.3 116 65.5
Gohir.A05G267200 Gossypium hirsutum HOM05D004394 ORTHO05D005208 1.6e-35 152.9 107 69.2
BcaB03g15991 Brassica carinata HOM05D004394 ORTHO05D005208 3.6e-35 151.8 116 68.1
CANSAT35G1737 Cannabis sativa HOM05D004394 ORTHO05D005208 8.1e-35 150.6 105 65.7
Gohir.D05G268800 Gossypium hirsutum HOM05D004394 ORTHO05D005208 8.1e-35 150.6 107 68.2
Gorai.009G281400 Gossypium raimondii HOM05D004394 ORTHO05D005208 8.1e-35 150.6 107 68.2
Nn6g33602 Nelumbo nucifera HOM05D004394 ORTHO05D005208 1.1e-34 150.2 105 65.7
Aa31LG7G6210 Aethionema arabicum HOM05D004394 ORTHO05D005208 1.8e-34 149.4 116 67.2
C06p52130 Brassica napus HOM05D003496 ORTHO05D003909 2.3e-34 149.1 119 65.5
BolC6t40236H Brassica oleracea HOM05D003496 ORTHO05D003909 2.3e-34 149.1 119 65.5
AT1G78190 Arabidopsis thaliana HOM05D004394 ORTHO05D005208 3.1e-34 148.7 116 66.4
AL2G38520 Arabidopsis lyrata HOM05D004394 ORTHO05D005208 5.2e-34 147.9 116 65.5
SHI20485 Sapria himalayana HOM05D004394 ORTHO05D005208 5.2e-34 147.9 125 59.2
CANSAT80G2909 Cannabis sativa HOM05D004394 ORTHO05D005208 6.8e-34 147.5 105 63.8
SEGI_05614 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 6.8e-34 147.5 105 64.8
BcaC08g47394 Brassica carinata HOM05D004394 ORTHO05D005208 3.4e-33 145.2 115 65.2
Mapoly0008s0078 Marchantia polymorpha HOM05D004394 ORTHO05D005208 5.8e-33 144.4 114 60.5
BraA07t31861Z Brassica rapa HOM05D003496 ORTHO05D003909 1.3e-32 143.3 115 65.2
SMO356G0508 Selaginella moellendorffii HOM05D004394 ORTHO05D005208 1.3e-32 143.3 105 62.9
A07p43490 Brassica napus HOM05D003496 ORTHO05D003909 1.7e-32 142.9 115 64.3
Carub.0002s2509 Capsella rubella HOM05D004394 ORTHO05D005208 3.7e-32 141.7 114 59.6
Haze_00323 Corylus avellana HOM05D004394 ORTHO05D005208 8.4e-32 140.6 105 63.8
CiPaw.07G180000 Carya illinoinensis HOM05D004394 ORTHO05D005208 3.2e-31 138.7 116 60.3
Pp3c10_8220 Physcomitrium patens HOM05D004394 ORTHO05D005208 7.8e-30 134.0 105 57.1
Cpa.g.sc247.5 Carica papaya HOM05D004394 ORTHO05D005208 1.7e-29 132.9 116 61.2
CBR_g44926 Chara braunii HOM05D004394 ORTHO05D005208 6.6e-29 131.0 105 56.2
Cre12.g512550 Chlamydomonas reinhardtii HOM05D004394 ORTHO05D005208 6.2e-27 124.4 106 56.6
Nn8g39569 Nelumbo nucifera HOM05D004394 ORTHO05D005208 8.9e-26 120.6 101 57.4
AUR62038524 Chenopodium quinoa HOM05D004394 ORTHO05D005208 1.5e-25 119.8 85 62.4
AagrBONN_evm.TU.Sc2ySwM_344.4664 Anthoceros agrestis HOM05D004394 ORTHO05D005208 3.0e-21 105.5 113 46.9
QL05p087667 Quercus lobata HOM05D004394 ORTHO05D000126 7.3e-20 100.9 67 68.7
MCO01G362 Micromonas commoda HOM05D004394 ORTHO05D005208 2.1e-19 99.4 105 44.8
Zm00001eb109660 Zea mays HOM05D004394 ORTHO05D005208 3.6e-19 98.6 123 40.7
Os07g0623000 Oryza sativa ssp. japonica HOM05D004394 ORTHO05D005208 1.1e-18 97.1 123 42.3
Cfa016137 Carpinus fangiana HOM05D004394 ORTHO05D005208 9.0e-18 94.0 122 42.6
Cpa.g.sc257.3 Carica papaya HOM05D004394 ORTHO05D005208 5.8e-17 91.3 115 47.8
PRCOL_00005343 Prasinoderma coloniale HOM05D004394 ORTHO05D005208 4.2e-15 85.1 123 39.8
SEGI_26774 Sequoiadendron giganteum HOM05D004394 ORTHO05D005208 1.2e-14 83.6 53 66.0
Haze_27710 Corylus avellana HOM05D004394 ORTHO05D005208 6.0e-14 81.3 106 43.4
Lsat_1_v5_gn_4_16040 Lactuca sativa HOM05D004394 ORTHO05D005208 2.3e-13 79.3 67 58.2
Nn1g03585 Nelumbo nucifera HOM05D004394 ORTHO05D005208 8.7e-13 77.4 53 60.4


User provided reference genes

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