Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005774g0040 Nicotiana tabacum HOM05D005946 ORTHO05D007340 4.4e-32 140.6 66 100.0
CAN.G1089.18 Capsicum annuum HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
Nitab4.5_0001841g0040 Nicotiana tabacum HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
Nitab4.5_0008858g0060 Nicotiana tabacum HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
Solyc06g068780.3 Solanum lycopersicum HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
Sopen06g026060 Solanum pennellii HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
PGSC0003DMG400025576 Solanum tuberosum HOM05D005946 ORTHO05D007340 3.9e-12 74.3 34 100.0
CAN.G843.5 Capsicum annuum HOM05D005946 ORTHO05D007340 8.6e-12 73.2 34 97.1
Solyc03g118140.3 Solanum lycopersicum HOM05D005946 ORTHO05D007340 8.6e-12 73.2 34 97.1
Sopen03g037060 Solanum pennellii HOM05D005946 ORTHO05D007340 8.6e-12 73.2 34 97.1
EL10Ac6g13474 Beta vulgaris HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
CiPaw.05G112200 Carya illinoinensis HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
CiPaw.06G100600 Carya illinoinensis HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Dinv14819 Davidia involucrata HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Duzib248G1204 Durio zibethinus HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Duzib251G0400 Durio zibethinus HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
ECA246G0405 Erigeron canadensis HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Gohir.A03G127300 Gossypium hirsutum HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Gohir.D02G150700 Gossypium hirsutum HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Gorai.002G192200 Gossypium raimondii HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Gorai.005G169000 Gossypium raimondii HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
HanXRQChr17g0534681 Helianthus annuus HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Lsat_1_v5_gn_3_12801 Lactuca sativa HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Lsat_1_v5_gn_6_8840 Lactuca sativa HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Manes.12G013300 Manihot esculenta HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Manes.13G017850 Manihot esculenta HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Potri.008G176801 Populus trichocarpa HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Potri.010G058300 Populus trichocarpa HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Rhsim07G0080600 Rhododendron simsii HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
Thecc.02G276900 Theobroma cacao HOM05D005946 ORTHO05D007340 1.1e-11 72.8 34 97.1
CSS0024427 Camellia sinensis var. sinensis HOM05D005946 ORTHO05D007340 1.5e-11 72.4 34 94.1
Dinv16088 Davidia involucrata HOM05D005946 ORTHO05D007340 1.5e-11 72.4 34 94.1
Rhsim12G0028200 Rhododendron simsii HOM05D005946 ORTHO05D007340 1.5e-11 72.4 34 94.1
TWI36G1309 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 2.5e-11 71.6 34 94.1
CANSAT21G2474 Cannabis sativa HOM05D005946 ORTHO05D007340 3.3e-11 71.2 34 94.1
PGR004G0564 Punica granatum HOM05D005946 ORTHO05D007340 3.3e-11 71.2 34 91.2
Sed0005468 Sechium edule HOM05D005946 ORTHO05D007340 3.3e-11 71.2 34 94.1
Sed0027475 Sechium edule HOM05D005946 ORTHO05D007340 3.3e-11 71.2 34 94.1
Eucgr.B03471 Eucalyptus grandis HOM05D005946 ORTHO05D007340 4.3e-11 70.9 34 91.2
HanXRQChr07g0190741 Helianthus annuus HOM05D005946 ORTHO05D007340 4.3e-11 70.9 34 94.1
MD06G1111800 Malus domestica HOM05D005946 ORTHO05D007340 4.3e-11 70.9 34 91.2
Cc00_g13530 Coffea canephora HOM05D005946 ORTHO05D007340 5.6e-11 70.5 34 94.1
MD14G1133000 Malus domestica HOM05D005946 ORTHO05D007340 5.6e-11 70.5 34 91.2
Phvul.001G260400 Phaseolus vulgaris HOM05D005946 ORTHO05D007340 5.6e-11 70.5 34 94.1
PGR102G2803 Punica granatum HOM05D005946 ORTHO05D007340 5.6e-11 70.5 34 88.2
TWI36G1530 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 5.6e-11 70.5 34 91.2
Ciclev10033263m.g Citrus clementina HOM05D005946 ORTHO05D007340 7.3e-11 70.1 34 91.2
Migut.N01429 Erythranthe guttata HOM05D005946 ORTHO05D007340 7.3e-11 70.1 34 94.1
Prupe.5G124600 Prunus persica HOM05D005946 ORTHO05D007340 7.3e-11 70.1 34 88.2
TWI14G1045 Tripterygium wilfordii HOM05D005946 ORTHO05D007340 7.3e-11 70.1 34 91.2
vmacro01071 Vaccinium macrocarpon HOM05D005946 ORTHO05D007340 7.3e-11 70.1 34 91.2
Aa31LG10G8610 Aethionema arabicum HOM05D005946 ORTHO05D007340 9.5e-11 69.7 34 91.2
Nn1g00299 Nelumbo nucifera HOM05D005946 ORTHO05D007340 9.5e-11 69.7 32 93.8
arahy.Tifrunner.gnm1.ann1.55451G Arachis hypogaea HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
arahy.Tifrunner.gnm1.ann1.XCNA8V Arachis hypogaea HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
CARHR192660 Cardamine hirsuta HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
Thhalv10015210m.g Eutrema salsugineum HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
Medtr3g085600 Medicago truncatula HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
Sp6g24240 Schrenkiella parvula HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
THA.LOC109116592 Tarenaya hassleriana HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
TPR.G21803 Trifolium pratense HOM05D005946 ORTHO05D007340 1.2e-10 69.3 34 91.2
Glyma.11G249100 Glycine max HOM05D005946 ORTHO05D007340 1.6e-10 68.9 34 91.2
Lj4g0023384 Lotus japonicus HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 88.2
PSO063G0123 Papaver somniferum HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 91.2
PSO170G6765 Papaver somniferum HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 91.2
SalBow5G0243 Salvia bowleyana HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 91.2
SalBow5G1014 Salvia bowleyana HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 91.2
TAR374G1140 Trochodendron aralioides HOM05D005946 ORTHO05D007340 2.1e-10 68.6 34 91.2
A03p09890 Brassica napus HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
A10p19740 Brassica napus HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
C09p56030 Brassica napus HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
BolC3t13619H Brassica oleracea HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
BolC9t58470H Brassica oleracea HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
BraA03t10302Z Brassica rapa HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
BraA10t44050Z Brassica rapa HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 88.2
Nn3g18946 Nelumbo nucifera HOM05D005946 ORTHO05D007340 2.8e-10 68.2 32 93.8
Os02g0299600 Oryza sativa ssp. japonica HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 85.3
unitig_747.g21988 Utricularia gibba HOM05D005946 ORTHO05D007340 2.8e-10 68.2 34 91.2
Actinidia27305 Actinidia chinensis HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 88.2
AL6G31720 Arabidopsis lyrata HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 88.2
AT5G20165 Arabidopsis thaliana HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 88.2
Carub.0006s1856 Capsella rubella HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 88.2
FvH4_5g11580 Fragaria vesca HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 88.2
SEGI_28367 Sequoiadendron giganteum HOM05D005946 ORTHO05D007340 3.6e-10 67.8 34 85.3
CDE10G0705 Ceratophyllum demersum HOM05D005946 ORTHO05D007340 4.7e-10 67.4 34 85.3
Os05g0251500 Oryza sativa ssp. japonica HOM05D005946 ORTHO05D007340 4.7e-10 67.4 34 85.3
Migut.B01726 Erythranthe guttata HOM05D005946 ORTHO05D007340 6.1e-10 67.0 34 88.2
Lalb_Chr05g0223941 Lupinus albus HOM05D005946 ORTHO05D007340 6.1e-10 67.0 34 85.3
MSTRG.28215 Avicennia marina HOM05D005946 ORTHO05D007340 8.0e-10 66.6 34 88.2
MBI07_g24770_MAGBIO Magnolia biondii HOM05D005946 ORTHO05D007340 8.0e-10 66.6 34 85.3
Zm00001eb237180 Zea mays HOM05D005946 ORTHO05D007340 8.0e-10 66.6 34 82.4
Lalb_Chr09g0332191 Lupinus albus HOM05D005946 ORTHO05D007340 1.0e-09 66.2 34 88.2
Psat7g023880 Pisum sativum HOM05D005946 ORTHO05D007340 1.8e-09 65.5 34 85.3
SalBow3G2240 Salvia bowleyana HOM05D005946 ORTHO05D007340 4.0e-09 64.3 34 88.2
FvH4_4g23990 Fragaria vesca HOM05D005946 ORTHO05D007340 5.2e-09 63.9 32 87.5
Mapoly0008s0042 Marchantia polymorpha HOM05D005946 ORTHO05D007340 5.2e-09 63.9 34 85.3
Sabra08G0134600 Salix brachista HOM05D005946 ORTHO05D007340 5.2e-09 63.9 48 68.8
RcHm_v2.0_Chr4g0430651 Rosa chinensis HOM05D005946 ORTHO05D007340 6.8e-09 63.5 32 84.4
unitig_0.g1509 Utricularia gibba HOM05D005946 ORTHO05D007340 2.0e-08 62.0 34 85.3
AagrBONN_evm.TU.Sc2ySwM_228.3656 Anthoceros agrestis HOM05D005946 ORTHO05D007340 4.4e-08 60.8 34 76.5
Pp3s128_20 Physcomitrium patens HOM05D005946 ORTHO05D007340 2.2e-07 58.5 34 73.5
THA.LOC104799646 Tarenaya hassleriana HOM05D005946 ORTHO05D007340 3.7e-07 57.8 53 58.5
vmacro14062 Vaccinium macrocarpon HOM05D005946 ORTHO05D007340 4.9e-07 57.4 26 92.3
CDE10G0420 Ceratophyllum demersum HOM05D005946 ORTHO05D007340 6.4e-07 57.0 26 88.5
HPP92_000512 Vanilla planifolia HOM05D005946 ORTHO05D007340 8.3e-07 56.6 26 88.5
Cre07.g325735 Chlamydomonas reinhardtii HOM05D005946 ORTHO05D007340 3.2e-06 54.7 34 64.7
RcHm_v2.0_Chr5g0020411 Rosa chinensis HOM05D005946 ORTHO05D007340 9.2e-06 53.1 32 68.8


User provided reference genes

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