Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005765g0040 Nicotiana tabacum HOM05D003670 ORTHO05D004767 4.5e-222 774.2 380 100.0
Peaxi162Scf00006g00159 Petunia axillaris HOM05D003670 ORTHO05D004767 1.5e-180 636.3 382 84.3
Nitab4.5_0000388g0140 Nicotiana tabacum HOM05D003670 ORTHO05D004767 2.5e-180 635.6 323 97.2
Nitab4.5_0006241g0010 Nicotiana tabacum HOM05D003670 ORTHO05D004767 3.3e-180 635.2 381 82.4
Peaxi162Scf00452g00333 Petunia axillaris HOM05D003670 ORTHO05D004767 6.1e-179 630.9 378 81.7
CAN.G943.51 Capsicum annuum HOM05D003670 ORTHO05D004767 7.5e-177 624.0 378 81.7
Nitab4.5_0000029g0340 Nicotiana tabacum HOM05D003670 ORTHO05D004767 6.4e-176 620.9 379 81.0
CSS0006756 Camellia sinensis var. sinensis HOM05D003670 ORTHO05D004767 1.2e-174 616.7 381 79.5
PGSC0003DMG400022232 Solanum tuberosum HOM05D003670 ORTHO05D004767 1.0e-173 613.6 381 80.8
Rhsim06G0242300 Rhododendron simsii HOM05D003670 ORTHO05D004767 6.8e-170 600.9 401 75.1
Hma1.2p1_0151F.1_g067325 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 1.3e-168 596.7 379 78.4
Sopen07g034740 Solanum pennellii HOM05D003670 ORTHO05D004767 1.7e-168 596.3 382 78.8
Solyc02g078990.4 Solanum lycopersicum HOM05D003670 ORTHO05D004767 1.9e-167 592.8 328 86.9
Cc05_g16310 Coffea canephora HOM05D003670 ORTHO05D004767 2.4e-167 592.4 378 76.2
Solyc07g066580.3 Solanum lycopersicum HOM05D003670 ORTHO05D004767 3.2e-167 592.0 381 78.5
Manes.06G175700 Manihot esculenta HOM05D003670 ORTHO05D004767 7.0e-167 590.9 378 76.2
Sopen02g023800 Solanum pennellii HOM05D003670 ORTHO05D004767 2.0e-166 589.3 319 88.4
Migut.H01671 Erythranthe guttata HOM05D003670 ORTHO05D004767 1.7e-165 586.3 382 75.9
Gohir.A13G123400 Gossypium hirsutum HOM05D003670 ORTHO05D004767 6.6e-165 584.3 378 75.4
GSVIVG01036786001 Vitis vinifera HOM05D003670 ORTHO05D004767 6.6e-165 584.3 378 75.7
HanXRQChr11g0335601 Helianthus annuus HOM05D003670 ORTHO05D004767 2.5e-164 582.4 382 77.0
Lsat_1_v5_gn_7_110680 Lactuca sativa HOM05D003670 ORTHO05D004767 3.3e-164 582.0 380 76.3
Manes.14G010300 Manihot esculenta HOM05D003670 ORTHO05D004767 9.5e-164 580.5 377 75.3
Gohir.D13G127300 Gossypium hirsutum HOM05D003670 ORTHO05D004767 2.1e-163 579.3 378 75.1
Lj3g0014239 Lotus japonicus HOM05D003670 ORTHO05D004767 8.1e-163 577.4 381 74.8
QL04p088520 Quercus lobata HOM05D003670 ORTHO05D004767 8.1e-163 577.4 403 71.7
Gorai.013G142500 Gossypium raimondii HOM05D003670 ORTHO05D004767 1.8e-162 576.2 379 75.2
MD05G1228000 Malus domestica HOM05D003670 ORTHO05D004767 6.8e-162 574.3 378 74.3
Potri.007G069300 Populus trichocarpa HOM05D003670 ORTHO05D004767 1.2e-161 573.5 377 74.5
ECA236G3562 Erigeron canadensis HOM05D003670 ORTHO05D004767 1.5e-161 573.2 318 86.2
Lalb_Chr25g0284691 Lupinus albus HOM05D003670 ORTHO05D004767 1.5e-161 573.2 381 74.0
PGR031G1669 Punica granatum HOM05D003670 ORTHO05D004767 2.6e-161 572.4 380 74.7
CiPaw.11G061900 Carya illinoinensis HOM05D003670 ORTHO05D004767 9.9e-161 570.5 378 73.8
TWI39G0091 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 9.9e-161 570.5 378 74.9
CANSAT80G2697 Cannabis sativa HOM05D003670 ORTHO05D004767 2.2e-160 569.3 380 75.3
RcHm_v2.0_Chr5g0024611 Rosa chinensis HOM05D003670 ORTHO05D004767 3.7e-160 568.5 378 74.6
Thecc.07G180400 Theobroma cacao HOM05D003670 ORTHO05D004767 3.7e-160 568.5 377 73.2
Prupe.4G134300 Prunus persica HOM05D003670 ORTHO05D004767 4.9e-160 568.2 378 72.5
COL.COLO4_32264 Corchorus olitorius HOM05D003670 ORTHO05D004767 1.4e-159 566.6 346 77.7
MBI02_g18168_MAGBIO Magnolia biondii HOM05D003670 ORTHO05D004767 5.4e-159 564.7 377 74.3
Ciclev10005196m.g Citrus clementina HOM05D003670 ORTHO05D004767 1.2e-158 563.5 374 73.8
FAN11G2825 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.2e-158 563.5 378 72.8
Medtr2g067080 Medicago truncatula HOM05D003670 ORTHO05D004767 1.2e-158 563.5 380 72.9
FvH4_3g14990 Fragaria vesca HOM05D003670 ORTHO05D004767 1.6e-158 563.1 378 72.5
Phvul.005G050400 Phaseolus vulgaris HOM05D003670 ORTHO05D004767 1.6e-158 563.1 381 72.7
TWI38G1711 Tripterygium wilfordii HOM05D003670 ORTHO05D004767 6.0e-158 561.2 380 74.7
TPR.G33813 Trifolium pratense HOM05D003670 ORTHO05D004767 1.3e-157 560.1 379 72.6
Aqoxy1G01484 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 2.3e-157 559.3 379 74.1
MD10G1208500 Malus domestica HOM05D003670 ORTHO05D004767 2.3e-157 559.3 378 73.0
TAR583G0001 Trochodendron aralioides HOM05D003670 ORTHO05D004767 3.0e-157 558.9 379 72.8
FAN21G1395 Fragaria x ananassa HOM05D003670 ORTHO05D004767 3.9e-157 558.5 378 72.2
VMungo1080G1660 Vigna mungo HOM05D003670 ORTHO05D004767 3.9e-157 558.5 361 75.3
Sp5g34280 Schrenkiella parvula HOM05D003670 ORTHO05D004767 5.1e-157 558.1 379 72.3
Glyma.08G167100 Glycine max HOM05D003670 ORTHO05D004767 8.6e-157 557.4 381 72.4
Psat1g013760 Pisum sativum HOM05D003670 ORTHO05D004767 1.5e-156 556.6 377 71.9
Nn7g37780 Nelumbo nucifera HOM05D003670 ORTHO05D004767 4.3e-156 555.1 318 83.3
Aa31LG4G1790 Aethionema arabicum HOM05D003670 ORTHO05D004767 5.6e-156 554.7 369 73.4
Thhalv10018699m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 7.3e-156 554.3 382 71.2
Duzib187G0441 Durio zibethinus HOM05D003670 ORTHO05D004767 1.2e-155 553.5 318 81.1
FAN25G1710 Fragaria x ananassa HOM05D003670 ORTHO05D004767 1.2e-155 553.5 394 70.1
EL10Ac2g03264 Beta vulgaris HOM05D003670 ORTHO05D004767 1.6e-155 553.1 379 72.3
Ca_03600_v3 Cicer arietinum L. HOM05D003670 ORTHO05D004767 2.8e-155 552.4 381 71.4
CsaV3_3G018980 Cucumis sativus L. HOM05D003670 ORTHO05D004767 4.7e-155 551.6 380 70.5
AL2G39700 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 8.1e-155 550.8 377 70.6
PSO675G6901 Papaver somniferum HOM05D003670 ORTHO05D004767 8.1e-155 550.8 380 70.8
AUR62037644 Chenopodium quinoa HOM05D003670 ORTHO05D004767 1.1e-154 550.4 380 71.8
Oeu002796.1 Olea europaea HOM05D003670 ORTHO05D004767 1.1e-154 550.4 335 78.5
Ah.10g033690 Amaranthus hybridus HOM05D003670 ORTHO05D004767 1.4e-154 550.1 399 69.7
CARHR072860 Cardamine hirsuta HOM05D003670 ORTHO05D004767 1.4e-154 550.1 320 80.0
ATR0763G120 Amborella trichopoda HOM05D003670 ORTHO05D004767 1.8e-154 549.7 312 83.3
AUR62039184 Chenopodium quinoa HOM05D003670 ORTHO05D004767 3.1e-154 548.9 380 71.3
PSO541G1524 Papaver somniferum HOM05D003670 ORTHO05D004767 3.1e-154 548.9 383 70.5
MSTRG.14566 Avicennia marina HOM05D003670 ORTHO05D004767 4.0e-154 548.5 380 71.3
Eucgr.F04458 Eucalyptus grandis HOM05D003670 ORTHO05D004767 4.0e-154 548.5 377 71.1
CARHR016930 Cardamine hirsuta HOM05D003670 ORTHO05D004767 5.2e-154 548.1 378 70.1
AT1G79230 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.4e-153 545.4 377 70.6
A07p44350 Brassica napus HOM05D003670 ORTHO05D004767 3.4e-153 545.4 379 69.9
THA.LOC104812362 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 4.4e-153 545.0 378 71.4
BcaB02g07206 Brassica carinata HOM05D003670 ORTHO05D004767 5.8e-153 544.7 381 69.8
Carub.0002s2610 Capsella rubella HOM05D003670 ORTHO05D004767 9.9e-153 543.9 383 70.8
BcaC08g45368 Brassica carinata HOM05D003670 ORTHO05D004767 1.3e-152 543.5 380 70.5
C06p30000 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-152 543.5 380 70.5
BolC6t38160H Brassica oleracea HOM05D003670 ORTHO05D004767 1.7e-152 543.1 380 70.5
A07p27230 Brassica napus HOM05D003670 ORTHO05D004767 2.2e-152 542.7 380 70.3
BraA07t30367Z Brassica rapa HOM05D003670 ORTHO05D004767 2.2e-152 542.7 380 70.3
BraA07t31943Z Brassica rapa HOM05D003670 ORTHO05D004767 2.9e-152 542.3 379 69.4
vmacro11699 Vaccinium macrocarpon HOM05D003670 ORTHO05D004767 1.1e-151 540.4 370 72.2
Carub.0001s1620 Capsella rubella HOM05D003670 ORTHO05D004767 1.9e-151 539.7 383 68.9
Potri.005G095300 Populus trichocarpa HOM05D003670 ORTHO05D004767 3.2e-151 538.9 307 82.7
Os12g0608600 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 1.6e-150 536.6 316 79.1
Sabra07G0056700 Salix brachista HOM05D003670 ORTHO05D004767 3.5e-150 535.4 396 68.9
Sed0012107 Sechium edule HOM05D003670 ORTHO05D004767 3.5e-150 535.4 378 69.6
THA.LOC104813608 Tarenaya hassleriana HOM05D003670 ORTHO05D004767 7.8e-150 534.3 380 68.9
DCAR_019919 Daucus carota HOM05D003670 ORTHO05D004767 1.3e-149 533.5 380 70.8
Thhalv10007910m.g Eutrema salsugineum HOM05D003670 ORTHO05D004767 5.1e-149 531.6 321 77.3
unitig_578.g16333 Utricularia gibba HOM05D003670 ORTHO05D004767 6.6e-149 531.2 350 71.4
BcaB05g25180 Brassica carinata HOM05D003670 ORTHO05D004767 8.7e-149 530.8 317 79.8
BolC5t30186H Brassica oleracea HOM05D003670 ORTHO05D004767 4.3e-148 528.5 386 67.9
Zm00001eb031400 Zea mays HOM05D003670 ORTHO05D004767 9.6e-148 527.3 316 77.5
BcaC05g25571 Brassica carinata HOM05D003670 ORTHO05D004767 2.8e-147 525.8 386 67.9
C05p14650 Brassica napus HOM05D003670 ORTHO05D004767 3.6e-147 525.4 386 67.6
Sabra05G0078800 Salix brachista HOM05D003670 ORTHO05D004767 2.4e-146 522.7 352 73.0
Cfa022976 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.1e-146 522.3 378 68.3
BcaB02g06624 Brassica carinata HOM05D003670 ORTHO05D004767 2.2e-144 516.2 382 66.2
BraA06t24401Z Brassica rapa HOM05D003670 ORTHO05D004767 4.9e-144 515.0 385 67.3
HPP92_013192 Vanilla planifolia HOM05D003670 ORTHO05D004767 1.4e-143 513.5 380 66.1
Hund20101 Selenicereus undatus HOM05D003670 ORTHO05D004767 1.9e-143 513.1 377 68.4
A06p12380 Brassica napus HOM05D003670 ORTHO05D004767 1.2e-142 510.4 379 66.5
AL1G28600 Arabidopsis lyrata HOM05D003670 ORTHO05D004767 2.1e-142 509.6 321 75.4
Oeu043724.2 Olea europaea HOM05D003670 ORTHO05D004767 3.5e-142 508.8 322 75.2
Aa31LG7G1000 Aethionema arabicum HOM05D003670 ORTHO05D004767 4.6e-142 508.4 319 73.7
Duzib213G1009 Durio zibethinus HOM05D003670 ORTHO05D004767 7.8e-142 507.7 385 67.5
Glyma.15G260300 Glycine max HOM05D003670 ORTHO05D004767 1.3e-141 506.9 350 71.7
Sp1g14610 Schrenkiella parvula HOM05D003670 ORTHO05D004767 1.7e-141 506.5 323 73.1
AT1G16460 Arabidopsis thaliana HOM05D003670 ORTHO05D004767 3.6e-139 498.8 321 73.8
ClCG05G009800 Citrullus lanatus HOM05D003670 ORTHO05D000003 1.1e-138 497.3 380 65.5
MSTRG.7076 Avicennia marina HOM05D003670 ORTHO05D004767 1.2e-137 493.8 322 70.8
SGA_v2.0_scaffold186G40197 Striga asiatica HOM05D003670 ORTHO05D004767 6.4e-136 488.0 304 71.4
Lj2A15G76 Lonicera japonica HOM05D003670 ORTHO05D004767 8.4e-136 487.6 347 72.0
Sc06g0002800 Simmondsia chinensis HOM05D003670 ORTHO05D004767 3.2e-135 485.7 351 70.7
unitig_8.g4750 Utricularia gibba HOM05D003670 ORTHO05D004767 2.1e-134 483.0 374 64.2
SEGI_21826 Sequoiadendron giganteum HOM05D003670 ORTHO05D004767 6.0e-134 481.5 326 70.6
arahy.Tifrunner.gnm1.ann1.36F1KB Arachis hypogaea HOM05D003670 ORTHO05D004767 3.0e-133 479.2 353 68.6
DCAR_016837 Daucus carota HOM05D003670 ORTHO05D004767 1.7e-128 463.4 302 70.9
arahy.Tifrunner.gnm1.ann1.YZ7E83 Arachis hypogaea HOM05D003670 ORTHO05D004767 5.5e-127 458.4 353 66.9
MELO3C019489.2 Cucumis melo HOM05D003670 ORTHO05D004767 1.6e-126 456.8 327 68.5
BcaC08g47490 Brassica carinata HOM05D003670 ORTHO05D004767 2.7e-126 456.1 382 62.0
C06p53140 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-125 453.8 257 81.7
BolC6t40330H Brassica oleracea HOM05D003670 ORTHO05D004767 1.3e-125 453.8 257 81.7
Os02g0167100 Oryza sativa ssp. japonica HOM05D003670 ORTHO05D004767 6.5e-120 434.9 296 64.5
QL04p088965 Quercus lobata HOM05D003670 ORTHO05D004767 1.1e-119 434.1 241 84.6
Mapoly0058s0078 Marchantia polymorpha HOM05D003670 ORTHO05D004767 2.5e-119 433.0 320 61.6
SGA_v2.0_scaffold49G18190 Striga asiatica HOM05D003670 ORTHO05D004767 1.3e-115 420.6 358 62.3
AagrBONN_evm.TU.Sc2ySwM_344.5346 Anthoceros agrestis HOM05D003670 ORTHO05D004767 1.4e-114 417.2 322 61.2
Haze_07818 Corylus avellana HOM05D003670 ORTHO05D004767 6.5e-112 408.3 325 65.5
Zm00001eb207410 Zea mays HOM05D003670 ORTHO05D004767 7.2e-111 404.8 329 58.4
Dinv19592 Davidia involucrata HOM05D003670 ORTHO05D004767 6.7e-109 398.3 280 72.9
Pp3c9_17670 Physcomitrium patens HOM05D003670 ORTHO05D004767 1.7e-107 393.7 325 57.5
CDE06G2006 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 8.5e-104 381.3 237 73.8
Rhsim05G0210500 Rhododendron simsii HOM05D003670 ORTHO05D004767 1.9e-103 380.2 248 75.8
HPP92_013209 Vanilla planifolia HOM05D003670 ORTHO05D004767 2.1e-102 376.7 380 53.4
SMO119G0061 Selaginella moellendorffii HOM05D003670 ORTHO05D004767 6.1e-102 375.2 300 58.3
Actinidia12766 Actinidia chinensis HOM05D003670 ORTHO05D004767 1.2e-94 350.9 234 75.6
FAN16G2550 Fragaria x ananassa HOM05D003670 ORTHO05D004767 6.7e-93 345.1 195 82.1
CDE02G0962 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 5.7e-92 342.0 237 69.6
MD05G1228700 Malus domestica HOM05D003670 ORTHO05D004767 4.1e-90 335.9 195 80.0
Cpa.g.sc34.17 Carica papaya HOM05D003670 ORTHO05D004767 1.4e-85 320.9 216 72.7
A02p22680 Brassica napus HOM05D003670 ORTHO05D004767 1.3e-75 287.7 342 48.0
RcHm_v2.0_Chr5g0024731 Rosa chinensis HOM05D003670 ORTHO05D004767 1.7e-75 287.3 196 75.0
C02p36310 Brassica napus HOM05D003670 ORTHO05D004767 2.1e-70 270.4 219 63.9
CBR_g17038 Chara braunii HOM05D003670 ORTHO05D004767 8.0e-70 268.5 342 43.6
MCO09G588 Micromonas commoda HOM05D003670 ORTHO05D004767 2.0e-68 263.8 299 47.2
Cre13.g607050 Chlamydomonas reinhardtii HOM05D003670 ORTHO05D004767 1.4e-66 257.7 324 42.9
PRCOL_00006295 Prasinoderma coloniale HOM05D003670 ORTHO05D004767 4.1e-66 256.1 309 44.7
Hma1.2p1_0269F.1_g107810 Hydrangea macrophylla HOM05D003670 ORTHO05D004767 3.7e-51 206.5 153 68.6
Aqoxy1G03000 Aquilegia oxysepala HOM05D003670 ORTHO05D004767 4.1e-50 203.0 122 78.7
MD05G1228600 Malus domestica HOM05D003670 ORTHO05D004767 1.5e-44 184.5 182 57.1
Cfa026738 Carpinus fangiana HOM05D003670 ORTHO05D004767 3.2e-42 176.8 328 38.1
CAN.G891.1 Capsicum annuum HOM05D003670 ORTHO05D004767 1.8e-37 161.0 94 86.2
C03p82980 Brassica napus HOM05D003670 ORTHO05D004767 1.7e-35 154.5 94 81.9
BcaC01g00674 Brassica carinata HOM05D003670 ORTHO05D004767 2.9e-35 153.7 92 82.6
BolC1t01654H Brassica oleracea HOM05D003670 ORTHO05D004767 6.4e-35 152.5 131 62.6
BcaC04g18607 Brassica carinata HOM05D003670 ORTHO05D004767 3.2e-34 150.2 92 80.4
C01p17180 Brassica napus HOM05D003670 ORTHO05D004767 5.4e-34 149.4 131 61.8
BolC9t58925H Brassica oleracea HOM05D003670 ORTHO05D004767 4.6e-33 146.4 131 60.3
Cpa.g.sc34.16 Carica papaya HOM05D003670 ORTHO05D004767 5.3e-29 132.9 75 81.3
Solyc06g009850.3 Solanum lycopersicum HOM05D003670 ORTHO05D014971 5.3e-29 132.9 117 64.1
Oeu010650.2 Olea europaea HOM05D003670 ORTHO05D004767 6.9e-29 132.5 97 71.1
Lsat_1_v5_gn_4_93521 Lactuca sativa HOM05D003670 ORTHO05D004767 1.2e-28 131.7 66 92.4
Oeu034061.1 Olea europaea HOM05D003670 ORTHO05D020012 4.9e-27 126.3 75 80.0
CDE06G0877 Ceratophyllum demersum HOM05D003670 ORTHO05D004767 5.1e-24 116.3 63 81.0
Mapoly0032s0014 Marchantia polymorpha HOM05D003670 ORTHO05D031137 1.3e-22 111.7 310 28.7
BcaC06g34801 Brassica carinata HOM05D003670 ORTHO05D004767 8.1e-22 109.0 92 65.2
BolC7t42971H Brassica oleracea HOM05D003670 ORTHO05D004767 1.4e-21 108.2 133 48.1
BcaC03g15876 Brassica carinata HOM05D003670 ORTHO05D020012 2.4e-18 97.4 61 73.8
BcaC05g28269 Brassica carinata HOM05D003670 ORTHO05D014971 3.0e-16 90.5 51 82.4
AagrBONN_evm.TU.Sc2ySwM_117.2139 Anthoceros agrestis HOM05D003670 ORTHO05D031137 9.6e-15 85.5 247 30.0
QL04p088979 Quercus lobata HOM05D003670 ORTHO05D004767 2.1e-14 84.3 100 50.0
Sopen06g004510 Solanum pennellii HOM05D003670 ORTHO05D014971 1.1e-13 82.0 47 83.0
BcaC02g07679 Brassica carinata HOM05D003670 ORTHO05D014971 1.0e-11 75.5 41 85.4
Solyc06g009860.1 Solanum lycopersicum HOM05D003670 ORTHO05D020012 1.7e-11 74.7 46 71.7
C06p40160 Brassica napus HOM05D003670 ORTHO05D020012 7.1e-10 69.3 42 73.8
BolC6t39098H Brassica oleracea HOM05D003670 ORTHO05D020012 7.1e-10 69.3 42 73.8
Hma1.2p1_1039F.1_g250810 Hydrangea macrophylla HOM05D001854 ORTHO05D001800 5.1e-08 63.2 39 79.5
Lsat_1_v5_gn_8_160501 Lactuca sativa HOM05D003670 ORTHO05D002209 8.7e-08 62.4 33 90.9


User provided reference genes

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