Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005761g0130 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.2e-54 216.1 100 100.0
Nitab4.5_0000752g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.7e-17 92.0 96 45.8
Nitab4.5_0000559g0420 Nicotiana tabacum HOM05D000003 ORTHO05D000283 6.0e-17 90.9 99 45.5
Nitab4.5_0005117g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.8e-14 82.0 58 62.1
Nitab4.5_0005579g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 4.8e-14 81.3 58 58.6
Nitab4.5_0002772g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.1e-13 80.1 58 60.3
Nitab4.5_0003415g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 6.9e-13 77.4 112 38.4
Nitab4.5_0002840g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000283 9.0e-13 77.0 99 39.4
Nitab4.5_0000258g0280 Nicotiana tabacum HOM05D008253 ORTHO05D000283 1.2e-12 76.6 87 44.8
Nitab4.5_0003715g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.2e-12 76.6 58 56.9
Nitab4.5_0000051g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.6e-12 75.5 87 44.8
Nitab4.5_0006534g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.6e-12 75.5 110 40.0
Nitab4.5_0000008g0120 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.8e-12 74.3 103 40.8
Nitab4.5_0004664g0030 Nicotiana tabacum HOM05D008253 ORTHO05D000283 5.8e-12 74.3 75 48.0
Nitab4.5_0002059g0030 Nicotiana tabacum HOM05D008253 ORTHO05D000283 7.6e-12 73.9 37 83.8
Nitab4.5_0005761g0140 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.7e-11 72.8 80 46.2
Nitab4.5_0005612g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.9e-11 72.0 93 37.6
Nitab4.5_0014112g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.1e-10 70.1 62 50.0
Atru.chr3.2014 Acer truncatum HOM05D000003 ORTHO05D000283 4.2e-10 68.2 57 52.6
Nitab4.5_0001370g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000283 4.2e-10 68.2 79 40.5
Nitab4.5_0005808g0090 Nicotiana tabacum HOM05D000003 ORTHO05D000283 5.5e-10 67.8 62 45.2
Atru.chr5.1984 Acer truncatum HOM05D000003 ORTHO05D000283 7.1e-10 67.4 57 52.6
Nitab4.5_0000234g0180 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.2e-09 66.6 68 48.5
Sopen00g007850 Solanum pennellii HOM05D000003 ORTHO05D000004 1.2e-09 66.6 58 50.0
Carub.0001s4199 Capsella rubella HOM05D000003 ORTHO05D000283 1.6e-09 66.2 58 53.4
Carub.0003s2082 Capsella rubella HOM05D000003 ORTHO05D000283 1.6e-09 66.2 58 53.4
BraA04t17757Z Brassica rapa HOM05D000003 ORTHO05D000283 2.1e-09 65.9 59 47.5
Nitab4.5_0004086g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.1e-09 65.9 92 35.9
EL10Ac7g16210 Beta vulgaris HOM05D000003 ORTHO05D000283 2.7e-09 65.5 95 37.9
BcaB06g27917 Brassica carinata HOM05D000003 ORTHO05D000283 2.7e-09 65.5 55 54.5
Nitab4.5_0001488g0080 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.7e-09 65.5 58 46.6
Nitab4.5_0001617g0040 Nicotiana tabacum HOM05D008783 ORTHO05D000283 3.5e-09 65.1 62 46.8
Nitab4.5_0001794g0150 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.5e-09 65.1 53 50.9
Atru.chr7.449 Acer truncatum HOM05D000004 ORTHO05D000563 4.6e-09 64.7 57 49.1
Atru.chr3.1845 Acer truncatum HOM05D000003 ORTHO05D000283 6.0e-09 64.3 57 49.1
Aqoxy2G03655 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.0e-09 64.3 64 40.6
Aqoxy4G00589 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.0e-09 64.3 64 40.6
Aqoxy4G01058 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.0e-09 64.3 64 40.6
Nitab4.5_0001175g0190 Nicotiana tabacum HOM05D000003 ORTHO05D000283 6.0e-09 64.3 92 39.1
Nitab4.5_0008993g0030 Nicotiana tabacum HOM05D000658 ORTHO05D000826 6.0e-09 64.3 58 43.1
Atru.chr11.551 Acer truncatum HOM05D000003 ORTHO05D000004 7.9e-09 63.9 56 50.0
Nitab4.5_0002348g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 7.9e-09 63.9 65 44.6
Sopen05g017150 Solanum pennellii HOM05D000002 ORTHO05D000001 7.9e-09 63.9 57 45.6
EL10Ac2g03628 Beta vulgaris HOM05D029026 ORTHO05D000283 1.0e-08 63.5 71 39.4
Nitab4.5_0009949g0020 Nicotiana tabacum HOM05D008253 ORTHO05D000283 1.0e-08 63.5 48 54.2
Sopen00g013500 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-08 63.5 57 47.4
Sopen05g016440 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-08 63.5 83 39.8
Sopen12g026800 Solanum pennellii HOM05D000003 ORTHO05D000004 1.0e-08 63.5 57 49.1
THA.LOC104825816 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.0e-08 63.5 58 55.2
Nitab4.5_0001094g0040 Nicotiana tabacum HOM05D008253 ORTHO05D000283 1.3e-08 63.2 69 40.6
Sopen11g016050 Solanum pennellii HOM05D000004 ORTHO05D000004 1.8e-08 62.8 57 47.4
Atru.chr5.1992 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 62.4 57 47.4
Nitab4.5_0007847g0010 Nicotiana tabacum HOM05D008253 ORTHO05D000283 3.0e-08 62.0 86 39.5
Nitab4.5_0009772g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.0e-08 62.0 65 46.2
Sopen00g007890 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-08 62.0 57 49.1
Sopen07g017840 Solanum pennellii HOM05D000003 ORTHO05D000004 3.0e-08 62.0 57 47.4
THA.LOC109116848 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 3.0e-08 62.0 59 42.4
Atru.chr7.161 Acer truncatum HOM05D000003 ORTHO05D000283 3.9e-08 61.6 57 49.1
Atru.chr7.164 Acer truncatum HOM05D000003 ORTHO05D000283 3.9e-08 61.6 57 47.4
EL10Ac2g03899 Beta vulgaris HOM05D000003 ORTHO05D000283 3.9e-08 61.6 57 47.4
Nitab4.5_0001198g0280 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.9e-08 61.6 58 41.4
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 3.9e-08 61.6 57 43.9
AL2G38250 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 6.7e-08 60.8 54 50.0
BolC7t40516H Brassica oleracea HOM05D000003 ORTHO05D000283 6.7e-08 60.8 54 50.0
Dinv01210 Davidia involucrata HOM05D000003 ORTHO05D000283 6.7e-08 60.8 57 47.4
Dinv01211 Davidia involucrata HOM05D000003 ORTHO05D000283 6.7e-08 60.8 57 47.4
BcaB06g27122 Brassica carinata HOM05D000003 ORTHO05D000283 8.7e-08 60.5 62 45.2
BcaC08g44971 Brassica carinata HOM05D000003 ORTHO05D000004 8.7e-08 60.5 73 42.5
Sopen00g010080 Solanum pennellii HOM05D000003 ORTHO05D000004 8.7e-08 60.5 56 44.6
THA.LOC109117009 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.1e-07 60.1 57 49.1
Atru.chr9.172 Acer truncatum HOM05D000003 ORTHO05D000004 1.5e-07 59.7 57 47.4
Aqoxy4G01216 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.5e-07 59.7 74 37.8
AL3G40240 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.5e-07 59.7 54 50.0
Nitab4.5_0010596g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.5e-07 59.7 67 40.3
PGR044G2585 Punica granatum HOM05D000003 ORTHO05D000283 1.5e-07 59.7 57 43.9
Sopen06g013900 Solanum pennellii HOM05D000003 ORTHO05D000004 1.5e-07 59.7 57 45.6
Nitab4.5_0006149g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.9e-07 59.3 56 41.1
PGSC0003DMG400018734 Solanum tuberosum HOM05D000003 ORTHO05D000283 1.9e-07 59.3 67 40.3
THA.LOC104807041 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 1.9e-07 59.3 58 46.6
Aqoxy2G00968 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.5e-07 58.9 64 39.1
BraA01t01398Z Brassica rapa HOM05D000003 ORTHO05D000283 2.5e-07 58.9 69 42.0
CSS0025070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000283 2.5e-07 58.9 58 50.0
CANSAT80G0153 Cannabis sativa HOM05D000003 ORTHO05D000004 2.5e-07 58.9 57 43.9
ECA236G4757 Erigeron canadensis HOM05D000003 ORTHO05D000283 2.5e-07 58.9 56 44.6
Nitab4.5_0005625g0040 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.5e-07 58.9 58 44.8
Sopen00g004700 Solanum pennellii HOM05D000003 ORTHO05D000004 2.5e-07 58.9 57 43.9
BolC2t06931H Brassica oleracea HOM05D000003 ORTHO05D000283 3.3e-07 58.5 54 50.0
BolC2t07181H Brassica oleracea HOM05D000003 ORTHO05D000283 3.3e-07 58.5 64 45.3
Nitab4.5_0000719g0060 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.3e-07 58.5 66 39.4
Nitab4.5_0002818g0050 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.3e-07 58.5 55 41.8
Nitab4.5_0006217g0020 Nicotiana tabacum HOM05D000003 ORTHO05D000283 3.3e-07 58.5 68 38.2
Nitab4.5_0010967g0030 Nicotiana tabacum HOM05D008253 ORTHO05D000283 3.3e-07 58.5 80 42.5
Sopen00g008640 Solanum pennellii HOM05D000003 ORTHO05D000004 3.3e-07 58.5 57 42.1
vmacro03128 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 4.3e-07 58.2 57 45.6
BraA04t17013Z Brassica rapa HOM05D000003 ORTHO05D000283 5.7e-07 57.8 68 44.1
BraA09t38940Z Brassica rapa HOM05D000003 ORTHO05D000283 5.7e-07 57.8 64 43.8
Sopen00g013340 Solanum pennellii HOM05D000003 ORTHO05D000004 5.7e-07 57.8 64 43.8
Sopen02g001330 Solanum pennellii HOM05D000003 ORTHO05D000004 5.7e-07 57.8 57 45.6
Sopen12g018040 Solanum pennellii HOM05D000003 ORTHO05D000004 5.7e-07 57.8 57 43.9
Dinv09491 Davidia involucrata HOM05D013557 ORTHO05D015636 7.4e-07 57.4 56 46.4
Sopen00g008520 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-07 57.4 68 41.2
Sopen00g008600 Solanum pennellii HOM05D000003 ORTHO05D000004 7.4e-07 57.4 57 43.9
PGSC0003DMG400021950 Solanum tuberosum HOM05D000003 ORTHO05D000283 7.4e-07 57.4 80 36.2
THA.LOC104825769 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 7.4e-07 57.4 58 48.3
Atru.chr10.517 Acer truncatum HOM05D000003 ORTHO05D000283 9.6e-07 57.0 52 48.1
BcaB07g31154 Brassica carinata HOM05D000003 ORTHO05D000283 9.6e-07 57.0 53 49.1
BcaNung03504 Brassica carinata HOM05D000003 ORTHO05D027488 9.6e-07 57.0 58 48.3
C07p39070 Brassica napus HOM05D000003 ORTHO05D000283 9.6e-07 57.0 54 48.1
BolC1t01432H Brassica oleracea HOM05D000003 ORTHO05D000283 9.6e-07 57.0 54 46.3
Sopen00g005620 Solanum pennellii HOM05D000003 ORTHO05D000004 9.6e-07 57.0 72 36.1
vmacro08092 Vaccinium macrocarpon HOM05D000003 ORTHO05D000283 9.6e-07 57.0 91 33.0
Atru.chr9.194 Acer truncatum HOM05D000003 ORTHO05D000283 1.3e-06 56.6 56 48.2
Aqoxy3G03041 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-06 56.2 73 39.7
Aqoxy7G01788 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.6e-06 56.2 63 38.1
AL96U10010 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 1.6e-06 56.2 61 44.3
CANSAT35G0602 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-06 56.2 91 36.3
Carub.0002s0853 Capsella rubella HOM05D000003 ORTHO05D000283 1.6e-06 56.2 57 45.6
Duzib150G0793 Durio zibethinus HOM05D000003 ORTHO05D000283 1.6e-06 56.2 53 49.1
Nitab4.5_0002020g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.6e-06 56.2 58 37.9
Nitab4.5_0002405g0010 Nicotiana tabacum HOM05D000003 ORTHO05D000283 1.6e-06 56.2 54 42.6
Ah.10g028500 Amaranthus hybridus HOM05D000216 ORTHO05D000634 2.1e-06 55.8 87 39.1
AL2G10360 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 2.1e-06 55.8 53 49.1
BolC6t37177H Brassica oleracea HOM05D000003 ORTHO05D000283 2.1e-06 55.8 78 38.5
Sopen00g011580 Solanum pennellii HOM05D000003 ORTHO05D000004 2.1e-06 55.8 57 42.1
THA.LOC104801610 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 2.1e-06 55.8 58 50.0
THA.LOC104814739 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.1e-06 55.8 57 43.9
THA.LOC104820715 Tarenaya hassleriana HOM05D000003 ORTHO05D000004 2.1e-06 55.8 57 45.6
Aqoxy1G03600 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 2.8e-06 55.5 62 38.7
BcaC05g26562 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-06 55.5 63 41.3
BcaC09g49882 Brassica carinata HOM05D000003 ORTHO05D000283 2.8e-06 55.5 54 50.0
CANSAT54G0647 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-06 55.5 87 34.5
CANSAT56G3640 Cannabis sativa HOM05D000003 ORTHO05D000283 2.8e-06 55.5 87 35.6
ECA246G1602 Erigeron canadensis HOM05D000003 ORTHO05D000004 2.8e-06 55.5 77 37.7
Nitab4.5_0001940g0030 Nicotiana tabacum HOM05D000003 ORTHO05D000283 2.8e-06 55.5 48 47.9
Sabra18G0037800 Salix brachista HOM05D003631 ORTHO05D000007 2.8e-06 55.5 53 54.7
Sp1g31420 Schrenkiella parvula HOM05D000003 ORTHO05D000283 2.8e-06 55.5 77 40.3
Sopen03g014510 Solanum pennellii HOM05D000014 ORTHO05D000016 2.8e-06 55.5 57 42.1
C09p27360 Brassica napus HOM05D000003 ORTHO05D000283 3.7e-06 55.1 56 46.4
BolC5t32204H Brassica oleracea HOM05D000003 ORTHO05D000283 3.7e-06 55.1 64 42.2
BraA06t23500Z Brassica rapa HOM05D000003 ORTHO05D000283 3.7e-06 55.1 53 50.9
Carub.0003s3092 Capsella rubella HOM05D000003 ORTHO05D000283 3.7e-06 55.1 53 47.2
PSO063G3151 Papaver somniferum HOM05D000737 ORTHO05D000581 3.7e-06 55.1 64 42.2
Sopen00g011320 Solanum pennellii HOM05D000003 ORTHO05D000004 3.7e-06 55.1 57 40.4
Aqoxy2G00985 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.8e-06 54.7 62 38.7
Aqoxy3G02214 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.8e-06 54.7 64 40.6
Aqoxy5G03183 Aquilegia oxysepala HOM05D000003 ORTHO05D000283 4.8e-06 54.7 93 34.4
C04p09320 Brassica napus HOM05D000003 ORTHO05D000283 4.8e-06 54.7 59 44.1
BolC2t07536H Brassica oleracea HOM05D000003 ORTHO05D000283 4.8e-06 54.7 64 39.1
BolC4t23916H Brassica oleracea HOM05D000003 ORTHO05D000283 4.8e-06 54.7 53 47.2
BraA05t22446Z Brassica rapa HOM05D000003 ORTHO05D000283 4.8e-06 54.7 55 45.5
Dinv26275 Davidia involucrata HOM05D000723 ORTHO05D001760 4.8e-06 54.7 57 43.9
PSO832G1493 Papaver somniferum HOM05D000003 ORTHO05D000283 4.8e-06 54.7 58 51.7
Sabra02G0000200 Salix brachista HOM05D000003 ORTHO05D000283 4.8e-06 54.7 78 37.2
THA.LOC104799701 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 4.8e-06 54.7 52 48.1
Aa31LG6G8950 Aethionema arabicum HOM05D000003 ORTHO05D000004 6.2e-06 54.3 69 42.0
AL1G41870 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 6.2e-06 54.3 61 44.3
AL7G34100 Arabidopsis lyrata HOM05D000003 ORTHO05D000004 6.2e-06 54.3 53 47.2
BcaC05g25052 Brassica carinata HOM05D000003 ORTHO05D000283 6.2e-06 54.3 53 43.4
BolC5t31190H Brassica oleracea HOM05D000003 ORTHO05D000283 6.2e-06 54.3 56 42.9
Sopen00g006610 Solanum pennellii HOM05D000003 ORTHO05D000004 6.2e-06 54.3 57 40.4
PGSC0003DMG400029210 Solanum tuberosum HOM05D000003 ORTHO05D000283 6.2e-06 54.3 57 47.4
THA.LOC104807150 Tarenaya hassleriana HOM05D000583 ORTHO05D000004 6.2e-06 54.3 53 45.3
THA.LOC104808463 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 6.2e-06 54.3 69 36.2
AL3G45200 Arabidopsis lyrata HOM05D000003 ORTHO05D000283 8.2e-06 53.9 58 48.3
BcaC05g27506 Brassica carinata HOM05D000003 ORTHO05D000283 8.2e-06 53.9 64 42.2
BolC8t47713H Brassica oleracea HOM05D000003 ORTHO05D000283 8.2e-06 53.9 53 47.2
BraA02t06658Z Brassica rapa HOM05D000003 ORTHO05D000283 8.2e-06 53.9 53 49.1
PGR142G2091 Punica granatum HOM05D000003 ORTHO05D000283 8.2e-06 53.9 58 46.6
Sabra19G0073100 Salix brachista HOM05D000003 ORTHO05D000006 8.2e-06 53.9 75 42.7
THA.LOC104815125 Tarenaya hassleriana HOM05D000003 ORTHO05D000283 8.2e-06 53.9 61 42.6


User provided reference genes

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