Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005761g0120 Nicotiana tabacum HOM05D006429 ORTHO05D008173 3.2e-119 431.8 224 100.0
Solyc06g066090.3 Solanum lycopersicum HOM05D006429 ORTHO05D008173 1.2e-81 307.0 182 86.8
Sopen06g024570 Solanum pennellii HOM05D006429 ORTHO05D008173 3.9e-80 302.0 182 85.7
Nitab4.5_0000109g0260 Nicotiana tabacum HOM05D006429 ORTHO05D008173 9.5e-71 270.8 136 97.8
Peaxi162Scf00643g00324 Petunia axillaris HOM05D006429 ORTHO05D008173 1.0e-64 250.8 145 84.8
Cc08_g00870 Coffea canephora HOM05D006429 ORTHO05D008173 2.2e-59 233.0 188 67.0
Dinv30158 Davidia involucrata HOM05D006429 ORTHO05D008173 3.5e-57 225.7 183 67.2
Migut.E01793 Erythranthe guttata HOM05D006429 ORTHO05D008173 1.3e-56 223.8 185 62.7
Hma1.2p1_0007F.1_g004980 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 2.8e-54 216.1 183 64.5
Hma1.2p1_0007F.1_g004990 Hydrangea macrophylla HOM05D006429 ORTHO05D008173 2.8e-54 216.1 183 64.5
Cpa.g.sc115.3 Carica papaya HOM05D006429 ORTHO05D008173 3.6e-54 215.7 184 64.7
COL.COLO4_18834 Corchorus olitorius HOM05D006429 ORTHO05D008173 3.6e-54 215.7 155 71.0
TWI32G0327 Tripterygium wilfordii HOM05D006429 ORTHO05D008173 8.1e-54 214.5 183 62.8
MSTRG.1719 Avicennia marina HOM05D006429 ORTHO05D008173 1.8e-53 213.4 184 62.0
Nn8g39429 Nelumbo nucifera HOM05D006429 ORTHO05D008173 2.0e-52 209.9 158 69.0
Duzib187G0955 Durio zibethinus HOM05D006429 ORTHO05D008173 9.9e-52 207.6 155 67.7
SGA_v2.0_scaffold163G37988 Striga asiatica HOM05D006429 ORTHO05D008173 1.3e-51 207.2 174 64.4
Gohir.D07G031600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 1.7e-51 206.8 155 67.1
Actinidia15677 Actinidia chinensis HOM05D006429 ORTHO05D008173 2.9e-51 206.1 181 63.0
Thecc.09G027300 Theobroma cacao HOM05D006429 ORTHO05D008173 2.9e-51 206.1 155 67.7
Ciclev10008199m.g Citrus clementina HOM05D006429 ORTHO05D008173 4.9e-51 205.3 184 62.0
Gohir.A07G027600 Gossypium hirsutum HOM05D006429 ORTHO05D008173 6.4e-51 204.9 155 66.5
Gorai.001G033000 Gossypium raimondii HOM05D006429 ORTHO05D008173 6.4e-51 204.9 155 66.5
Rhsim07G0157100 Rhododendron simsii HOM05D006429 ORTHO05D008173 6.4e-51 204.9 185 61.1
PSO170G4475 Papaver somniferum HOM05D006429 ORTHO05D008173 8.4e-51 204.5 190 60.5
Manes.03G016200 Manihot esculenta HOM05D006429 ORTHO05D008173 1.4e-50 203.8 187 60.4
PGR044G2505 Punica granatum HOM05D006429 ORTHO05D008173 1.4e-50 203.8 156 67.3
GSVIVG01035836001 Vitis vinifera HOM05D006429 ORTHO05D008173 1.9e-50 203.4 184 59.8
PSO455G0002 Papaver somniferum HOM05D006429 ORTHO05D008173 3.2e-50 202.6 190 60.0
TAR626G0443 Trochodendron aralioides HOM05D006429 ORTHO05D008173 3.2e-50 202.6 157 66.9
CANSAT01G2886 Cannabis sativa HOM05D006429 ORTHO05D008173 4.2e-50 202.2 182 60.4
Phvul.001G051900 Phaseolus vulgaris HOM05D006429 ORTHO05D008173 1.2e-49 200.7 170 62.4
QL02p022136 Quercus lobata HOM05D006429 ORTHO05D008173 1.6e-49 200.3 158 65.2
CiPaw.08G012100 Carya illinoinensis HOM05D006429 ORTHO05D008173 4.6e-49 198.7 185 63.2
RcHm_v2.0_Chr6g0298181 Rosa chinensis HOM05D006429 ORTHO05D008173 1.0e-48 197.6 157 64.3
Cfa013165 Carpinus fangiana HOM05D006429 ORTHO05D008173 2.3e-48 196.4 182 58.8
Eucgr.C02795 Eucalyptus grandis HOM05D006429 ORTHO05D008173 3.0e-48 196.1 152 65.1
HanXRQChr13g0403421 Helianthus annuus HOM05D006429 ORTHO05D008173 3.0e-48 196.1 187 59.4
VMungo0647G0488 Vigna mungo HOM05D006429 ORTHO05D008173 3.0e-48 196.1 170 61.2
FvH4_2g29360 Fragaria vesca HOM05D006429 ORTHO05D008173 3.9e-48 195.7 155 65.2
Eucgr.C02791 Eucalyptus grandis HOM05D006429 ORTHO05D008173 5.1e-48 195.3 152 65.8
FAN27G0392 Fragaria x ananassa HOM05D006429 ORTHO05D008173 5.1e-48 195.3 155 65.2
MELO3C003691.2 Cucumis melo HOM05D006429 ORTHO05D008173 8.7e-48 194.5 152 67.1
CSS0049939 Camellia sinensis var. sinensis HOM05D006429 ORTHO05D008173 1.1e-47 194.1 177 61.6
FAN15G1390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 2.5e-47 193.0 155 64.5
Prupe.1G479100 Prunus persica HOM05D006429 ORTHO05D008173 3.3e-47 192.6 190 58.9
CsaV3_3G046490 Cucumis sativus L. HOM05D006429 ORTHO05D008173 7.3e-47 191.4 178 57.9
SalBow1G3525 Salvia bowleyana HOM05D006429 ORTHO05D008173 9.6e-47 191.0 184 55.4
Sc23g0006860 Simmondsia chinensis HOM05D006429 ORTHO05D008173 9.6e-47 191.0 144 69.4
Ca_12935_v3 Cicer arietinum L. HOM05D006429 ORTHO05D008173 1.6e-46 190.3 155 63.2
FAN24G2390 Fragaria x ananassa HOM05D006429 ORTHO05D008173 2.8e-46 189.5 155 63.9
arahy.Tifrunner.gnm1.ann1.DMN84V Arachis hypogaea HOM05D006429 ORTHO05D008173 3.6e-46 189.1 155 61.9
MBI01_g37798_MAGBIO Magnolia biondii HOM05D006429 ORTHO05D008173 4.8e-46 188.7 141 68.8
TPR.G15678 Trifolium pratense HOM05D006429 ORTHO05D008173 1.1e-45 187.6 157 58.6
Glyma.17G209600 Glycine max HOM05D006429 ORTHO05D008173 1.4e-45 187.2 183 56.8
arahy.Tifrunner.gnm1.ann1.H48Z1Z Arachis hypogaea HOM05D006429 ORTHO05D008173 5.3e-45 185.3 137 67.2
Aqoxy7G02159 Aquilegia oxysepala HOM05D006429 ORTHO05D008173 6.9e-45 184.9 164 61.0
Sed0015882 Sechium edule HOM05D006429 ORTHO05D008173 6.9e-45 184.9 150 63.3
Medtr1g012370 Medicago truncatula HOM05D006429 ORTHO05D008173 2.6e-44 183.0 152 59.2
Potri.006G252300 Populus trichocarpa HOM05D006429 ORTHO05D008173 4.4e-44 182.2 158 58.9
Lj5g0005549 Lotus japonicus HOM05D006429 ORTHO05D008173 7.6e-44 181.4 165 58.8
PGSC0003DMG400020474 Solanum tuberosum HOM05D006429 ORTHO05D008173 7.6e-44 181.4 95 92.6
Psat6g029600 Pisum sativum HOM05D006429 ORTHO05D008173 1.7e-43 180.3 185 52.4
DCAR_001526 Daucus carota HOM05D006429 ORTHO05D008173 2.2e-43 179.9 184 54.9
MD08G1148100 Malus domestica HOM05D006429 ORTHO05D008173 6.4e-43 178.3 193 53.9
ECA233G5545 Erigeron canadensis HOM05D006429 ORTHO05D008173 8.4e-43 177.9 144 63.2
Hund04535 Selenicereus undatus HOM05D006429 ORTHO05D008173 1.4e-42 177.2 142 64.8
Sabra06G0197200 Salix brachista HOM05D006429 ORTHO05D008173 2.4e-42 176.4 158 57.0
Atru.chr7.2397 Acer truncatum HOM05D006429 ORTHO05D008173 6.0e-41 171.8 142 62.0
Os03g0851900 Oryza sativa ssp. japonica HOM05D006429 ORTHO05D008173 4.3e-39 165.6 137 61.3
Ah.12g064110 Amaranthus hybridus HOM05D006429 ORTHO05D008173 1.6e-38 163.7 156 56.4
ATR0322G019 Amborella trichopoda HOM05D006429 ORTHO05D008173 2.1e-38 163.3 159 56.0
THA.LOC104803671 Tarenaya hassleriana HOM05D006429 ORTHO05D008173 8.1e-38 161.4 153 56.2
vmacro05185 Vaccinium macrocarpon HOM05D006429 ORTHO05D008173 8.1e-38 161.4 205 46.8
EL10Ac2g02614 Beta vulgaris HOM05D006429 ORTHO05D008173 6.9e-37 158.3 142 59.9
AUR62030635 Chenopodium quinoa HOM05D006429 ORTHO05D008173 8.4e-35 151.4 153 54.9
AT2G25530 Arabidopsis thaliana HOM05D006429 ORTHO05D008173 1.1e-34 151.0 152 51.3
BcaC07g40864 Brassica carinata HOM05D006429 ORTHO05D008173 1.1e-34 151.0 155 50.3
BolC8t51433H Brassica oleracea HOM05D006429 ORTHO05D008173 1.1e-34 151.0 155 50.3
C08p38620 Brassica napus HOM05D006429 ORTHO05D008173 1.4e-34 150.6 164 48.8
CARHR115890 Cardamine hirsuta HOM05D006429 ORTHO05D008173 1.4e-34 150.6 152 52.6
AUR62024907 Chenopodium quinoa HOM05D006429 ORTHO05D008173 1.4e-34 150.6 153 54.9
BraA09t40964Z Brassica rapa HOM05D006429 ORTHO05D008173 1.9e-34 150.2 164 48.8
A09p55620 Brassica napus HOM05D006429 ORTHO05D008173 2.4e-34 149.8 185 47.0
Aa31LG4G9870 Aethionema arabicum HOM05D006429 ORTHO05D008173 3.2e-34 149.4 153 51.0
Thhalv10000103m.g Eutrema salsugineum HOM05D006429 ORTHO05D008173 7.1e-34 148.3 152 50.7
Sp4g04810 Schrenkiella parvula HOM05D006429 ORTHO05D008173 7.1e-34 148.3 183 48.6
Carub.0004s0522 Capsella rubella HOM05D006429 ORTHO05D008173 3.5e-33 146.0 160 49.4
ClCG05G017010 Citrullus lanatus HOM05D006429 ORTHO05D008173 3.5e-33 146.0 175 48.6
HPP92_009845 Vanilla planifolia HOM05D006429 ORTHO05D008173 1.0e-32 144.4 141 53.2
BcaB08g35187 Brassica carinata HOM05D006429 ORTHO05D008173 2.3e-32 143.3 184 44.0
FAN16G3505 Fragaria x ananassa HOM05D006429 ORTHO05D008173 3.3e-31 139.4 138 55.8
Lsat_1_v5_gn_6_22441 Lactuca sativa HOM05D006429 ORTHO05D008173 1.6e-25 120.6 97 62.9
Zm00001eb064690 Zea mays HOM05D006429 ORTHO05D008173 8.7e-24 114.8 97 59.8
Pp3c7_12170 Physcomitrium patens HOM05D006429 ORTHO05D008173 5.7e-23 112.1 148 44.6
Lalb_Chr24g0402221 Lupinus albus HOM05D006429 ORTHO05D008173 9.6e-23 111.3 96 57.3
unitig_37.g12933 Utricularia gibba HOM05D006429 ORTHO05D008173 1.5e-20 104.0 144 43.1
SMO228G0075 Selaginella moellendorffii HOM05D006429 ORTHO05D008173 1.3e-19 100.9 156 38.5
SEGI_08944 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 1.3e-19 100.9 119 49.6
Mapoly0085s0040 Marchantia polymorpha HOM05D006429 ORTHO05D008173 5.0e-19 99.0 138 42.8
AagrBONN_evm.TU.Sc2ySwM_344.5555 Anthoceros agrestis HOM05D006429 ORTHO05D008173 3.2e-18 96.3 134 38.8
SalBow1G7385 Salvia bowleyana HOM05D040611 ORTHO05D037502 6.1e-17 92.0 93 50.5
Lj7A720G77 Lonicera japonica HOM05D006429 ORTHO05D008173 9.0e-13 78.2 40 82.5
Haze_21537 Corylus avellana HOM05D006429 ORTHO05D008173 4.5e-12 75.9 36 88.9
SEGI_20208 Sequoiadendron giganteum HOM05D006429 ORTHO05D008173 5.5e-10 68.9 48 64.6
AUR62032544 Chenopodium quinoa HOM05D006429 ORTHO05D008173 7.4e-07 58.5 81 42.0


User provided reference genes

Program Settings