Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005761g0030 Nicotiana tabacum HOM05D006875 ORTHO05D008416 3.3e-98 361.7 183 100.0
Nitab4.5_0000109g0180 Nicotiana tabacum HOM05D006875 ORTHO05D008416 8.3e-81 303.9 183 88.0
PGSC0003DMG400020470 Solanum tuberosum HOM05D006875 ORTHO05D008416 1.1e-64 250.4 187 75.9
Solyc06g066190.3 Solanum lycopersicum HOM05D006875 ORTHO05D008416 1.6e-63 246.5 185 75.1
Sopen06g024670 Solanum pennellii HOM05D006875 ORTHO05D008416 2.7e-63 245.7 185 75.1
Peaxi162Scf00185g01627 Petunia axillaris HOM05D006875 ORTHO05D008416 4.4e-58 228.4 188 72.9
MSTRG.13901 Avicennia marina HOM05D006875 ORTHO05D008416 2.0e-42 176.4 194 56.2
SGA_v2.0_scaffold144G35866 Striga asiatica HOM05D006875 ORTHO05D008416 7.6e-42 174.5 189 56.6
Migut.E01333 Erythranthe guttata HOM05D006875 ORTHO05D008416 1.7e-41 173.3 190 54.7
Cc08_g04080 Coffea canephora HOM05D006875 ORTHO05D008416 3.8e-41 172.2 187 55.6
CSS0027486 Camellia sinensis var. sinensis HOM05D006875 ORTHO05D008416 2.4e-40 169.5 200 52.5
Dinv29039 Davidia involucrata HOM05D006875 ORTHO05D008416 2.4e-40 169.5 188 56.9
Actinidia14761 Actinidia chinensis HOM05D006875 ORTHO05D008416 1.6e-39 166.8 194 54.1
Actinidia18144 Actinidia chinensis HOM05D006875 ORTHO05D008416 6.0e-39 164.9 193 53.4
SalBow4G1271 Salvia bowleyana HOM05D006875 ORTHO05D008416 1.7e-38 163.3 186 57.0
THA.LOC104806179 Tarenaya hassleriana HOM05D006875 ORTHO05D008416 1.4e-35 153.7 194 53.6
Duzib205G1866 Durio zibethinus HOM05D006875 ORTHO05D008416 1.2e-34 150.6 185 54.6
HanXRQChr16g0510981 Helianthus annuus HOM05D006875 ORTHO05D008416 2.6e-34 149.4 192 53.6
AT5G45590 Arabidopsis thaliana HOM05D006875 ORTHO05D008416 7.6e-34 147.9 191 51.3
CiPaw.12G070200 Carya illinoinensis HOM05D006875 ORTHO05D008416 7.6e-34 147.9 199 50.3
Medtr5g027470 Medicago truncatula HOM05D006875 ORTHO05D008416 2.2e-33 146.4 187 52.4
BcaC03g16779 Brassica carinata HOM05D006875 ORTHO05D008416 3.8e-33 145.6 184 50.5
BolC2t10706H Brassica oleracea HOM05D006875 ORTHO05D008416 3.8e-33 145.6 184 50.5
Potri.001G133600 Populus trichocarpa HOM05D006875 ORTHO05D008416 3.8e-33 145.6 193 50.3
Sp2g10480 Schrenkiella parvula HOM05D006875 ORTHO05D008416 4.9e-33 145.2 186 51.1
Sed0011128 Sechium edule HOM05D006875 ORTHO05D008416 4.9e-33 145.2 193 50.8
Carub.0008s0244 Capsella rubella HOM05D006875 ORTHO05D008416 6.4e-33 144.8 189 50.3
Oeu044464.1 Olea europaea HOM05D006875 ORTHO05D008416 1.4e-32 143.7 110 73.6
BcaC06g34424 Brassica carinata HOM05D006875 ORTHO05D008416 3.2e-32 142.5 184 52.2
C07p28660 Brassica napus HOM05D006875 ORTHO05D008416 3.2e-32 142.5 184 52.2
Aa31LG9G7450 Aethionema arabicum HOM05D006875 ORTHO05D008416 4.2e-32 142.1 186 50.5
Lalb_Chr05g0215561 Lupinus albus HOM05D006875 ORTHO05D008416 5.4e-32 141.7 189 51.9
AL8G13090 Arabidopsis lyrata HOM05D006875 ORTHO05D008416 1.2e-31 140.6 192 51.6
CARHR176440 Cardamine hirsuta HOM05D006875 ORTHO05D008416 1.2e-31 140.6 188 50.0
Hund14386 Selenicereus undatus HOM05D006875 ORTHO05D008416 1.2e-31 140.6 199 48.7
BolC7t43404H Brassica oleracea HOM05D006875 ORTHO05D008416 1.6e-31 140.2 188 51.6
arahy.Tifrunner.gnm1.ann1.7H2E39 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.1e-31 139.8 192 49.5
arahy.Tifrunner.gnm1.ann1.J2I619 Arachis hypogaea HOM05D006875 ORTHO05D008416 2.1e-31 139.8 192 49.5
A06p46520 Brassica napus HOM05D006875 ORTHO05D008416 2.1e-31 139.8 187 49.7
BraA06t27526Z Brassica rapa HOM05D006875 ORTHO05D008416 2.1e-31 139.8 187 49.7
Lalb_Chr16g0380861 Lupinus albus HOM05D006875 ORTHO05D008416 2.1e-31 139.8 191 51.3
C02p46480 Brassica napus HOM05D006875 ORTHO05D008416 2.7e-31 139.4 184 49.5
Thhalv10001052m.g Eutrema salsugineum HOM05D006875 ORTHO05D008416 2.7e-31 139.4 191 49.2
BcaC06g31539 Brassica carinata HOM05D006875 ORTHO05D008416 1.0e-30 137.5 185 50.3
Prupe.5G024300 Prunus persica HOM05D006875 ORTHO05D008416 2.3e-30 136.3 200 50.0
Duzib068G0693 Durio zibethinus HOM05D006875 ORTHO05D008416 3.0e-30 136.0 185 53.0
Sc01g0006090 Simmondsia chinensis HOM05D006875 ORTHO05D008416 5.1e-30 135.2 189 47.6
Ca_25148_v3 Cicer arietinum L. HOM05D006875 ORTHO05D008416 1.5e-29 133.7 184 52.2
EL10Ac5g11986 Beta vulgaris HOM05D006875 ORTHO05D008416 3.3e-29 132.5 187 48.1
GSVIVG01011544001 Vitis vinifera HOM05D006875 ORTHO05D008416 3.3e-29 132.5 174 50.0
Nn1g01960 Nelumbo nucifera HOM05D006875 ORTHO05D008416 5.6e-29 131.7 190 47.4
unitig_0.g2213 Utricularia gibba HOM05D006875 ORTHO05D008416 1.3e-28 130.6 131 60.3
Sabra01G0103300 Salix brachista HOM05D006875 ORTHO05D008416 2.8e-28 129.4 227 43.2
RcHm_v2.0_Chr7g0212891 Rosa chinensis HOM05D006875 ORTHO05D008416 3.7e-28 129.0 194 47.9
TPR.G9090 Trifolium pratense HOM05D006875 ORTHO05D008416 3.7e-28 129.0 187 49.2
Ah.12g055650 Amaranthus hybridus HOM05D006875 ORTHO05D008416 8.1e-28 127.9 189 50.3
TAR629G1490 Trochodendron aralioides HOM05D006875 ORTHO05D008416 8.1e-28 127.9 198 45.5
CsaV3_3G030390 Cucumis sativus L. HOM05D006875 ORTHO05D008416 4.0e-27 125.6 193 46.1
Hma1.2p1_0979F.1_g243510 Hydrangea macrophylla HOM05D006875 ORTHO05D008416 6.9e-27 124.8 192 44.8
MELO3C022766.2 Cucumis melo HOM05D006875 ORTHO05D008416 1.2e-26 124.0 193 45.1
Gohir.D08G173100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 1.2e-26 124.0 185 47.6
A02p29280 Brassica napus HOM05D006875 ORTHO05D008416 3.4e-26 122.5 183 47.0
BraA02t07958Z Brassica rapa HOM05D006875 ORTHO05D008416 3.4e-26 122.5 183 47.0
CDE05G0418 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 4.5e-26 122.1 185 44.9
Potri.003G099900 Populus trichocarpa HOM05D006875 ORTHO05D008416 7.6e-26 121.3 187 47.1
Glyma.01G009800 Glycine max HOM05D006875 ORTHO05D008416 1.3e-25 120.6 183 49.2
Cfa012555 Carpinus fangiana HOM05D006875 ORTHO05D008416 1.7e-25 120.2 193 48.2
VMungo1215G2146 Vigna mungo HOM05D006875 ORTHO05D008416 1.7e-25 120.2 184 47.8
Glyma.09G211300 Glycine max HOM05D006875 ORTHO05D008416 8.4e-25 117.9 181 49.2
Eucgr.D02619 Eucalyptus grandis HOM05D006875 ORTHO05D008416 3.2e-24 115.9 194 44.8
Lj2g0021598 Lotus japonicus HOM05D006875 ORTHO05D008416 4.2e-24 115.5 188 45.7
Phvul.002G132700 Phaseolus vulgaris HOM05D006875 ORTHO05D008416 1.2e-23 114.0 182 49.5
Thecc.03G314400 Theobroma cacao HOM05D006875 ORTHO05D008416 1.9e-21 106.7 183 41.5
Ciclev10002495m.g Citrus clementina HOM05D006875 ORTHO05D008416 3.3e-21 105.9 203 41.4
Zm00001eb025290 Zea mays HOM05D006875 ORTHO05D008416 4.3e-21 105.5 144 50.0
Os10g0579500 Oryza sativa ssp. japonica HOM05D006875 ORTHO05D008416 1.3e-20 104.0 110 58.2
Atru.chr6.1576 Acer truncatum HOM05D006875 ORTHO05D008416 8.2e-20 101.3 199 39.2
PSO063G1678 Papaver somniferum HOM05D006875 ORTHO05D008416 8.2e-20 101.3 188 42.0
Sabra03G0067900 Salix brachista HOM05D006875 ORTHO05D008416 8.2e-20 101.3 58 84.5
PSO782G2435 Papaver somniferum HOM05D006875 ORTHO05D008416 1.1e-19 100.9 184 42.4
vmacro14218 Vaccinium macrocarpon HOM05D006875 ORTHO05D008416 1.4e-19 100.5 269 34.6
TWI23G0606 Tripterygium wilfordii HOM05D006875 ORTHO05D008416 1.8e-19 100.1 58 84.5
Manes.17G011100 Manihot esculenta HOM05D006875 ORTHO05D008416 4.0e-19 99.0 193 41.5
Psat2g139680 Pisum sativum HOM05D006875 ORTHO05D008416 4.0e-19 99.0 162 46.3
FAN04G1681 Fragaria x ananassa HOM05D006875 ORTHO05D008416 9.0e-19 97.8 193 40.4
Cpa.g.c33846 Carica papaya HOM05D006875 ORTHO05D008416 1.2e-18 97.4 157 47.1
MD00G1000200 Malus domestica HOM05D006875 ORTHO05D008416 1.2e-18 97.4 203 39.9
COL.COLO4_16883 Corchorus olitorius HOM05D006875 ORTHO05D008416 2.0e-18 96.7 59 81.4
FAN08G3065 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.6e-18 96.3 196 39.8
Lsat_1_v5_gn_3_43041 Lactuca sativa HOM05D006875 ORTHO05D008416 2.6e-18 96.3 204 39.7
FAN13G1224 Fragaria x ananassa HOM05D006875 ORTHO05D008416 3.4e-18 95.9 193 40.4
Aqoxy3G02082 Aquilegia oxysepala HOM05D006875 ORTHO05D008416 7.6e-18 94.7 182 42.3
Gohir.A08G152100 Gossypium hirsutum HOM05D006875 ORTHO05D008416 7.6e-18 94.7 185 39.5
FvH4_5g23590 Fragaria vesca HOM05D006875 ORTHO05D008416 2.2e-17 93.2 192 39.1
FAN18G3946 Fragaria x ananassa HOM05D006875 ORTHO05D008416 2.2e-17 93.2 192 39.1
FAN18G3512 Fragaria x ananassa HOM05D006875 ORTHO05D008416 1.4e-16 90.5 192 38.0
CANSAT21G2454 Cannabis sativa HOM05D006875 ORTHO05D008416 1.9e-16 90.1 191 38.7
Haze_08111 Corylus avellana HOM05D006875 ORTHO05D008416 1.2e-15 87.4 164 43.9
ClCG07G002300 Citrullus lanatus HOM05D006875 ORTHO05D008416 7.9e-15 84.7 160 40.0
Mapoly0025s0027 Marchantia polymorpha HOM05D006875 ORTHO05D008416 3.9e-14 82.4 152 42.8
Gorai.004G180500 Gossypium raimondii HOM05D006875 ORTHO05D008416 5.1e-14 82.0 181 37.0
Rhsim07G0136500 Rhododendron simsii HOM05D006875 ORTHO05D008416 8.7e-14 81.3 170 37.6
Haze_08105 Corylus avellana HOM05D006875 ORTHO05D008416 1.9e-13 80.1 80 56.2
ECA233G1303 Erigeron canadensis HOM05D000321 ORTHO05D000204 2.5e-13 79.7 81 55.6
HPP92_025490 Vanilla planifolia HOM05D006875 ORTHO05D008416 2.8e-12 76.3 191 38.7
Pp3c9_12060 Physcomitrium patens HOM05D006875 ORTHO05D008416 4.8e-12 75.5 146 39.7
CDE11G0569 Ceratophyllum demersum HOM05D006875 ORTHO05D008416 8.2e-12 74.7 162 37.7
SHI45156 Sapria himalayana HOM05D006875 ORTHO05D008416 8.2e-12 74.7 75 54.7
QL12p000430 Quercus lobata HOM05D006875 ORTHO05D008416 1.3e-09 67.4 168 36.9
AagrBONN_evm.TU.Sc2ySwM_362.254 Anthoceros agrestis HOM05D006875 ORTHO05D008416 2.9e-09 66.2 86 47.7
ATR0829G201 Amborella trichopoda HOM05D006875 ORTHO05D008416 3.8e-09 65.9 94 46.8
DCAR_004255 Daucus carota HOM05D049898 ORTHO05D008416 4.2e-08 62.4 110 44.5
RcHm_v2.0_Chr1g0382651 Rosa chinensis HOM05D006875 ORTHO05D008416 7.2e-08 61.6 61 55.7
PGR031G1815 Punica granatum HOM05D006875 ORTHO05D008416 6.7e-06 55.1 157 34.4


User provided reference genes

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