Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005757g0030 Nicotiana tabacum HOM05D007078 ORTHO05D008745 8.2e-126 453.8 231 100.0
Nitab4.5_0001436g0040 Nicotiana tabacum HOM05D007078 ORTHO05D008745 1.4e-120 436.4 231 95.7
PGSC0003DMG400023469 Solanum tuberosum HOM05D007078 ORTHO05D008745 3.6e-105 385.2 234 83.8
Sopen05g034250 Solanum pennellii HOM05D007078 ORTHO05D008745 6.1e-105 384.4 232 83.2
Solyc05g055850.3 Solanum lycopersicum HOM05D007078 ORTHO05D008745 1.8e-104 382.9 232 82.8
Dinv11266 Davidia involucrata HOM05D007078 ORTHO05D008745 1.7e-78 296.6 229 68.6
QL12p022959 Quercus lobata HOM05D007078 ORTHO05D008745 3.3e-74 282.3 189 74.1
CiPaw.07G095800 Carya illinoinensis HOM05D007078 ORTHO05D008745 1.2e-73 280.4 189 72.5
CSS0036917 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 2.1e-73 279.6 233 67.0
GSVIVG01011060001 Vitis vinifera HOM05D007078 ORTHO05D008745 3.6e-73 278.9 190 72.6
CSS0044942 Camellia sinensis var. sinensis HOM05D007078 ORTHO05D008745 6.1e-73 278.1 233 66.5
Lsat_1_v5_gn_9_1840 Lactuca sativa HOM05D007078 ORTHO05D008745 4.0e-72 275.4 229 65.1
Oeu047893.1 Olea europaea HOM05D007078 ORTHO05D008745 5.2e-72 275.0 226 66.4
arahy.Tifrunner.gnm1.ann1.9GKU3H Arachis hypogaea HOM05D007078 ORTHO05D008745 8.9e-72 274.2 191 72.8
arahy.Tifrunner.gnm1.ann1.ERKA9X Arachis hypogaea HOM05D007078 ORTHO05D008745 8.9e-72 274.2 191 72.8
Glyma.19G152600 Glycine max HOM05D007078 ORTHO05D008745 1.5e-71 273.5 219 67.6
Gorai.004G084200 Gossypium raimondii HOM05D007078 ORTHO05D008745 1.5e-71 273.5 230 65.7
Potri.014G137300 Populus trichocarpa HOM05D007078 ORTHO05D008745 2.0e-71 273.1 234 62.8
CsaV3_7G028490 Cucumis sativus L. HOM05D007078 ORTHO05D008745 3.4e-71 272.3 229 62.0
Hma1.2p1_0628F.1_g191760 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 3.4e-71 272.3 224 64.7
Ciclev10022169m.g Citrus clementina HOM05D007078 ORTHO05D008745 4.4e-71 271.9 235 62.1
TWI59G1055 Tripterygium wilfordii HOM05D007078 ORTHO05D008745 4.4e-71 271.9 231 64.1
Sed0016724 Sechium edule HOM05D007078 ORTHO05D008745 5.8e-71 271.6 217 65.4
Manes.05G071800 Manihot esculenta HOM05D007078 ORTHO05D008745 7.5e-71 271.2 235 64.3
Phvul.001G147500 Phaseolus vulgaris HOM05D007078 ORTHO05D008745 7.5e-71 271.2 191 71.7
Gohir.D08G078400 Gossypium hirsutum HOM05D007078 ORTHO05D008745 9.8e-71 270.8 230 65.2
Nn3g21178 Nelumbo nucifera HOM05D007078 ORTHO05D008745 9.8e-71 270.8 189 71.4
CANSAT25G2561 Cannabis sativa HOM05D007078 ORTHO05D008745 1.7e-70 270.0 233 63.5
Prupe.8G247900 Prunus persica HOM05D007078 ORTHO05D008745 2.2e-70 269.6 230 63.0
TAR362G1057 Trochodendron aralioides HOM05D007078 ORTHO05D008745 2.2e-70 269.6 226 62.4
Cc09_g03260 Coffea canephora HOM05D007078 ORTHO05D008745 6.4e-70 268.1 255 61.2
MELO3C015872.2 Cucumis melo HOM05D007078 ORTHO05D008745 1.1e-69 267.3 229 62.4
VMungo1383G1152 Vigna mungo HOM05D007078 ORTHO05D008745 1.1e-69 267.3 195 69.2
Eucgr.K03409 Eucalyptus grandis HOM05D007078 ORTHO05D008745 1.4e-69 266.9 228 64.0
vmacro02537 Vaccinium macrocarpon HOM05D007078 ORTHO05D008745 1.9e-69 266.5 232 59.9
Duzib138G1888 Durio zibethinus HOM05D007078 ORTHO05D008745 7.0e-69 264.6 228 64.0
Atru.chr5.1330 Acer truncatum HOM05D007078 ORTHO05D008745 1.2e-68 263.8 227 64.8
Cfa006079 Carpinus fangiana HOM05D007078 ORTHO05D008745 1.6e-68 263.5 226 61.9
Cpa.g.sc9.128 Carica papaya HOM05D007078 ORTHO05D008745 2.0e-68 263.1 203 66.5
MD03G1271700 Malus domestica HOM05D007078 ORTHO05D008745 2.0e-68 263.1 225 63.1
Aqoxy5G00564 Aquilegia oxysepala HOM05D007078 ORTHO05D008745 2.7e-68 262.7 192 72.4
PGR044G0767 Punica granatum HOM05D007078 ORTHO05D008745 2.7e-68 262.7 144 86.1
HanXRQChr15g0466581 Helianthus annuus HOM05D007078 ORTHO05D008745 4.6e-68 261.9 219 64.4
ECA247G1342 Erigeron canadensis HOM05D007078 ORTHO05D008745 7.8e-68 261.2 223 62.8
Lj1g0026447 Lotus japonicus HOM05D007078 ORTHO05D008745 7.8e-68 261.2 241 61.8
ATR0626G125 Amborella trichopoda HOM05D007078 ORTHO05D008745 1.7e-67 260.0 175 70.9
DCAR_018382 Daucus carota HOM05D007078 ORTHO05D008745 2.3e-67 259.6 155 81.3
Migut.D00250 Erythranthe guttata HOM05D007078 ORTHO05D008745 3.0e-67 259.2 237 60.8
Ca_08555_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 5.0e-67 258.5 172 75.0
EL10Ac7g17029 Beta vulgaris HOM05D007078 ORTHO05D008745 6.6e-67 258.1 226 61.9
Haze_04771 Corylus avellana HOM05D007078 ORTHO05D008745 1.1e-66 257.3 158 79.7
Os05g0404400 Oryza sativa ssp. japonica HOM05D007078 ORTHO05D008745 1.9e-66 256.5 138 87.7
unitig_0.g636 Utricularia gibba HOM05D007078 ORTHO05D008745 1.9e-66 256.5 184 71.7
CDE12G0236 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 3.3e-66 255.8 189 67.7
Lj1C43T3 Lonicera japonica HOM05D007078 ORTHO05D008745 3.3e-66 255.8 228 61.4
Psat3g066400 Pisum sativum HOM05D007078 ORTHO05D008745 3.3e-66 255.8 157 78.3
Medtr7g094220 Medicago truncatula HOM05D007078 ORTHO05D008745 4.3e-66 255.4 172 75.0
RcHm_v2.0_Chr6g0291981 Rosa chinensis HOM05D007078 ORTHO05D008745 4.3e-66 255.4 224 60.7
THA.LOC104823061 Tarenaya hassleriana HOM05D007078 ORTHO05D008745 7.3e-66 254.6 192 67.2
Thecc.01G285900 Theobroma cacao HOM05D007078 ORTHO05D008745 9.5e-66 254.2 220 62.7
PSO210G6132 Papaver somniferum HOM05D007078 ORTHO05D008745 1.6e-65 253.4 178 69.7
Glyma.03G149600 Glycine max HOM05D007078 ORTHO05D008745 2.1e-65 253.1 214 65.0
FvH4_2g24170 Fragaria vesca HOM05D007078 ORTHO05D008745 4.7e-65 251.9 140 84.3
PSO832G3632 Papaver somniferum HOM05D007078 ORTHO05D008745 4.7e-65 251.9 232 58.6
Sp4g29960 Schrenkiella parvula HOM05D007078 ORTHO05D008745 1.1e-64 250.8 194 64.4
TPR.G32805 Trifolium pratense HOM05D007078 ORTHO05D008745 1.4e-64 250.4 172 73.8
MD11G1292300 Malus domestica HOM05D007078 ORTHO05D008745 1.8e-64 250.0 182 71.4
FAN27G0292 Fragaria x ananassa HOM05D007078 ORTHO05D008745 2.3e-64 249.6 139 84.2
PGR142G0265 Punica granatum HOM05D007078 ORTHO05D008745 3.1e-64 249.2 148 80.4
Thhalv10001627m.g Eutrema salsugineum HOM05D007078 ORTHO05D008745 4.0e-64 248.8 186 66.7
CARHR143460 Cardamine hirsuta HOM05D007078 ORTHO05D008745 6.8e-64 248.1 167 71.9
Rhsim13G0021200 Rhododendron simsii HOM05D005701 ORTHO05D007058 1.5e-63 246.9 184 65.8
AL4G47660 Arabidopsis lyrata HOM05D007078 ORTHO05D008745 2.0e-63 246.5 149 77.9
FAN15G0223 Fragaria x ananassa HOM05D007078 ORTHO05D008745 9.8e-63 244.2 135 84.4
Sc24g0004060 Simmondsia chinensis HOM05D007078 ORTHO05D008745 1.3e-62 243.8 227 59.9
AT2G48070 Arabidopsis thaliana HOM05D007078 ORTHO05D008745 2.2e-62 243.0 138 79.7
BcaC02g12558 Brassica carinata HOM05D007078 ORTHO05D008745 2.2e-62 243.0 195 63.1
BolSC55t61232H Brassica oleracea HOM05D007078 ORTHO05D008745 2.2e-62 243.0 195 63.1
AUR62006322 Chenopodium quinoa HOM05D007078 ORTHO05D008745 3.7e-62 242.3 134 84.3
Sabra14G0103700 Salix brachista HOM05D007078 ORTHO05D008745 6.4e-62 241.5 230 60.0
Carub.0004s3077 Capsella rubella HOM05D007078 ORTHO05D008745 8.3e-62 241.1 137 81.0
A05p00060 Brassica napus HOM05D007078 ORTHO05D008745 3.2e-61 239.2 197 61.9
BraA05t19002Z Brassica rapa HOM05D007078 ORTHO05D008745 3.2e-61 239.2 197 61.9
Aa31LG1G29480 Aethionema arabicum HOM05D007078 ORTHO05D008745 5.4e-61 238.4 134 82.8
BcaB02g08732 Brassica carinata HOM05D007078 ORTHO05D008745 7.8e-60 234.6 211 57.3
Mapoly0037s0112 Marchantia polymorpha HOM05D007078 ORTHO05D008745 1.3e-59 233.8 148 74.3
Ah.08g209880 Amaranthus hybridus HOM05D007078 ORTHO05D008745 1.7e-59 233.4 128 86.7
BNapus_Darmor_BZH_scaffold_188p00040 Brassica napus HOM05D007078 ORTHO05D008745 5.1e-59 231.9 190 62.6
AUR62026362 Chenopodium quinoa HOM05D007078 ORTHO05D008745 5.1e-59 231.9 129 84.5
Lalb_Chr01g0020251 Lupinus albus HOM05D007078 ORTHO05D008745 5.1e-59 231.9 172 64.5
AagrBONN_evm.TU.Sc2ySwM_117.1018 Anthoceros agrestis HOM05D007078 ORTHO05D008745 4.3e-58 228.8 172 62.8
FAN24G3201 Fragaria x ananassa HOM05D007078 ORTHO05D008745 6.2e-57 224.9 130 81.5
SMO358G0655 Selaginella moellendorffii HOM05D007078 ORTHO05D008745 6.8e-56 221.5 156 66.7
Pp3c24_17730 Physcomitrium patens HOM05D007078 ORTHO05D008745 3.7e-54 215.7 158 65.2
CBR_g32237 Chara braunii HOM05D007078 ORTHO05D008745 8.6e-51 204.5 138 67.4
Peaxi162Scf00156g00061 Petunia axillaris HOM05D007078 ORTHO05D008745 1.1e-45 187.6 167 63.5
CDE01G0430 Ceratophyllum demersum HOM05D007078 ORTHO05D008745 7.1e-45 184.9 95 86.3
Oeu006229.1 Olea europaea HOM05D007078 ORTHO05D008745 2.1e-44 183.3 90 91.1
MCO10G051 Micromonas commoda HOM05D007078 ORTHO05D008745 1.1e-40 171.0 130 60.8
ClCG09G006760 Citrullus lanatus HOM05D007078 ORTHO05D008745 4.0e-40 169.1 223 45.7
Cre03.g145207 Chlamydomonas reinhardtii HOM05D007078 ORTHO05D008745 1.2e-39 167.5 157 51.0
SGA_v2.0_scaffold11G05787 Striga asiatica HOM05D007078 ORTHO05D008745 7.1e-37 158.3 252 44.8
MBI19_g21637_MAGBIO Magnolia biondii HOM05D007078 ORTHO05D008745 1.6e-36 157.1 186 48.9
Gohir.A08G070800 Gossypium hirsutum HOM05D007078 ORTHO05D008745 2.3e-35 153.3 168 56.5
PRCOL_00000964 Prasinoderma coloniale HOM05D007078 ORTHO05D008745 1.5e-34 150.6 138 55.1
Actinidia00723 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.1e-33 146.7 72 87.5
Zm00001eb287740 Zea mays HOM05D007078 ORTHO05D008745 8.1e-33 144.8 76 92.1
SEGI_07843 Sequoiadendron giganteum HOM05D007078 ORTHO05D008745 5.3e-32 142.1 106 67.0
Ca_08589_v3 Cicer arietinum L. HOM05D007078 ORTHO05D008745 2.0e-31 140.2 110 69.1
HPP92_019174 Vanilla planifolia HOM05D007078 ORTHO05D008745 8.4e-30 134.8 85 75.3
PGR142G2005 Punica granatum HOM05D007078 ORTHO05D008745 1.6e-28 130.6 94 72.3
Actinidia24309 Actinidia chinensis HOM05D007078 ORTHO05D008745 2.8e-25 119.8 66 78.8
Hma1.2p1_0628F.1_g191770 Hydrangea macrophylla HOM05D007078 ORTHO05D008745 8.4e-22 108.2 56 83.9


User provided reference genes

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