Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005752g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.7e-32 139.8 68 100.0
Nitab4.5_0006891g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.1e-25 117.5 82 74.4
Nitab4.5_0008086g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.0e-24 115.2 82 74.4
Nitab4.5_0002702g0050 Nicotiana tabacum HOM05D002441 ORTHO05D002376 4.5e-24 114.0 61 88.5
Nitab4.5_0000999g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.3e-23 112.5 82 70.7
Nitab4.5_0004405g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.8e-23 110.9 61 85.2
Nitab4.5_0000109g0580 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.2e-22 107.5 75 73.3
Nitab4.5_0008011g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.6e-21 105.5 61 77.0
Nitab4.5_0007230g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.8e-18 94.0 54 77.8
Nitab4.5_0005864g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.7e-16 86.7 61 60.7
Nitab4.5_0014003g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.7e-16 86.7 61 62.3
Nitab4.5_0000212g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.5e-15 83.2 61 60.7
Nitab4.5_0002975g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.2e-14 81.3 61 59.0
Nitab4.5_0008694g0040 Nicotiana tabacum HOM05D000193 ORTHO05D008317 3.2e-14 81.3 61 59.0
Nitab4.5_0013078g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.5e-14 80.5 61 57.4
Nitab4.5_0013233g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.4e-14 79.7 61 57.4
Nitab4.5_0004881g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-13 79.3 66 57.6
Nitab4.5_0007509g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.7e-13 77.4 61 57.4
Nitab4.5_0000659g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.1e-13 77.0 60 58.3
Nitab4.5_0005875g0070 Nicotiana tabacum HOM05D000096 ORTHO05D008317 8.0e-13 76.6 61 55.7
Nitab4.5_0010449g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.0e-13 76.6 61 55.7
Nitab4.5_0020633g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.0e-12 76.3 61 54.1
Nitab4.5_0006081g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.4e-12 75.9 63 61.9
Nitab4.5_0004422g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.3e-12 75.1 61 54.1
Nitab4.5_0007703g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.3e-12 75.1 61 55.7
Nitab4.5_0000497g0190 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.0e-12 74.7 61 54.1
Nitab4.5_0000534g0030 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.0e-12 74.7 61 52.5
CAN.G453.5 Capsicum annuum HOM05D002441 ORTHO05D008317 5.2e-12 73.9 61 55.7
Nitab4.5_0007210g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.2e-12 73.9 39 87.2
Nitab4.5_0000632g0070 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.8e-12 73.6 61 57.4
Nitab4.5_0008414g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-11 72.8 66 53.0
Nitab4.5_0009232g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-11 72.8 61 52.5
Nitab4.5_0008207g0060 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-11 72.4 61 54.1
Nitab4.5_0012454g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.5e-11 72.4 77 45.5
Nitab4.5_0000083g0280 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.6e-11 71.6 61 52.5
Nitab4.5_0003435g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 3.4e-11 71.2 61 55.7
Nitab4.5_0000909g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 4.4e-11 70.9 61 52.5
Nitab4.5_0002444g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.7e-11 70.5 61 50.8
Nitab4.5_0001129g0140 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.5e-11 70.1 61 50.8
Nitab4.5_0008637g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.7e-10 68.9 61 50.8
Nitab4.5_0003330g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.8e-10 68.2 61 50.8
Nitab4.5_0008875g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 2.8e-10 68.2 61 50.8
Nitab4.5_0006365g0100 Nicotiana tabacum HOM05D002441 ORTHO05D008317 6.3e-10 67.0 67 47.8
Nitab4.5_0000935g0200 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.3e-10 66.6 36 86.1
Nitab4.5_0003780g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.3e-10 66.6 61 52.5
Nitab4.5_0013898g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 8.3e-10 66.6 50 58.0
Nitab4.5_0007533g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.8e-09 65.5 61 50.8
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 2.4e-09 65.1 58 53.4
Nitab4.5_0000970g0060 Nicotiana tabacum HOM05D002441 ORTHO05D002376 5.4e-09 63.9 61 50.8
Nitab4.5_0006882g0080 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.4e-09 63.9 74 45.9
Nitab4.5_0003517g0040 Nicotiana tabacum HOM05D002441 ORTHO05D008317 7.0e-09 63.5 54 48.1
Medtr3g056240 Medicago truncatula HOM05D000353 ORTHO05D000174 9.1e-09 63.2 58 53.4
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 9.1e-09 63.2 58 53.4
Nitab4.5_0011677g0010 Nicotiana tabacum HOM05D002441 ORTHO05D008317 9.1e-09 63.2 53 52.8
Nitab4.5_0004069g0050 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-08 62.8 68 57.4
Nitab4.5_0009595g0020 Nicotiana tabacum HOM05D002441 ORTHO05D008317 1.2e-08 62.8 61 44.3
Nitab4.5_0003787g0030 Nicotiana tabacum HOM05D002441 ORTHO05D002376 1.7e-07 58.9 56 48.2
arahy.Tifrunner.gnm1.ann1.A988JE Arachis hypogaea HOM05D002441 ORTHO05D002376 2.3e-07 58.5 61 45.9
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.9e-07 58.2 60 43.3
Lj6g0015688 Lotus japonicus HOM05D007499 ORTHO05D000174 3.8e-07 57.8 60 40.0
LjContig00141g0005393 Lotus japonicus HOM05D000353 ORTHO05D000174 3.8e-07 57.8 60 41.7
Nitab4.5_0000203g0300 Nicotiana tabacum HOM05D002441 ORTHO05D008317 5.0e-07 57.4 32 84.4
Lsat_1_v5_gn_2_23820 Lactuca sativa HOM05D007823 ORTHO05D000174 6.6e-07 57.0 59 40.7
Medtr1g036740 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr1g094230 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr3g078440 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr4g471610 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr6g039240 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr8g036090 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr8g096680 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
Medtr8g463820 Medicago truncatula HOM05D007848 ORTHO05D000174 6.6e-07 57.0 60 45.0
AL7G20110 Arabidopsis lyrata HOM05D000353 ORTHO05D000174 1.1e-06 56.2 64 42.2
AT2G05642 Arabidopsis thaliana HOM05D000353 ORTHO05D000174 1.1e-06 56.2 60 40.0
Medtr5g032920 Medicago truncatula HOM05D007848 ORTHO05D000174 1.1e-06 56.2 60 45.0
Phvul.010G059600 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.1e-06 56.2 60 45.0
CAN.G1212.9 Capsicum annuum HOM05D002441 ORTHO05D002376 1.9e-06 55.5 55 47.3
Medtr6g039230 Medicago truncatula HOM05D007848 ORTHO05D000174 1.9e-06 55.5 51 49.0
Medtr7g093810 Medicago truncatula HOM05D007848 ORTHO05D000174 1.9e-06 55.5 60 43.3
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 1.9e-06 55.5 60 41.7
CAN.G220.26 Capsicum annuum HOM05D002891 ORTHO05D002376 2.5e-06 55.1 51 47.1
Medtr5g060920 Medicago truncatula HOM05D007848 ORTHO05D000174 2.5e-06 55.1 60 43.3
Medtr3g095950 Medicago truncatula HOM05D007848 ORTHO05D000174 3.3e-06 54.7 60 43.3
Lsat_1_v5_gn_8_23420 Lactuca sativa HOM05D007823 ORTHO05D000174 4.2e-06 54.3 58 41.4
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-06 54.3 58 41.4
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 4.2e-06 54.3 58 41.4
arahy.Tifrunner.gnm1.ann1.2DB70H Arachis hypogaea HOM05D002441 ORTHO05D008317 5.5e-06 53.9 61 41.0
arahy.Tifrunner.gnm1.ann1.TD74G4 Arachis hypogaea HOM05D002441 ORTHO05D008317 5.5e-06 53.9 61 41.0
A01p18290 Brassica napus HOM05D000353 ORTHO05D000174 5.5e-06 53.9 60 40.0
ECA246G5033 Erigeron canadensis HOM05D000096 ORTHO05D000174 5.5e-06 53.9 60 41.7
HanXRQChr05g0158841 Helianthus annuus HOM05D000353 ORTHO05D000174 5.5e-06 53.9 58 37.9
Medtr1788s0010 Medicago truncatula HOM05D007848 ORTHO05D000174 5.5e-06 53.9 60 43.3
Medtr2g054710 Medicago truncatula HOM05D000353 ORTHO05D000174 5.5e-06 53.9 58 41.4
Medtr3g032190 Medicago truncatula HOM05D007848 ORTHO05D000174 5.5e-06 53.9 60 41.7
Medtr6g465570 Medicago truncatula HOM05D008036 ORTHO05D008317 5.5e-06 53.9 61 37.7
AL1G48730 Arabidopsis lyrata HOM05D000353 ORTHO05D031316 7.2e-06 53.5 64 39.1
arahy.Tifrunner.gnm1.ann1.GB31PP Arachis hypogaea HOM05D002441 ORTHO05D008317 7.2e-06 53.5 61 44.3
A02p24410 Brassica napus HOM05D000353 ORTHO05D000174 7.2e-06 53.5 60 38.3
Medtr3g116750 Medicago truncatula HOM05D007848 ORTHO05D000174 9.5e-06 53.1 60 41.7
Medtr8g088810 Medicago truncatula HOM05D007848 ORTHO05D000174 9.5e-06 53.1 60 41.7


User provided reference genes

Program Settings