Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005744g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.4e-108 396.4 205 100.0
Nitab4.5_0009769g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 7.6e-99 364.0 205 92.7
Peaxi162Scf00519g00066 Petunia axillaris HOM05D003139 ORTHO05D003540 2.9e-58 229.2 223 63.2
Sopen05g033710 Solanum pennellii HOM05D003139 ORTHO05D003540 2.2e-50 203.0 217 62.2
Solyc05g055270.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 3.8e-50 202.2 214 61.7
PGSC0003DMG400023494 Solanum tuberosum HOM05D003139 ORTHO05D003540 3.2e-49 199.1 217 59.0
Nitab4.5_0013140g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 2.2e-42 176.4 218 53.7
Nitab4.5_0009833g0020 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.2e-40 170.6 218 52.3
Sopen11g002810 Solanum pennellii HOM05D003139 ORTHO05D003540 1.2e-35 154.1 195 50.8
PGSC0003DMG400023971 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.2e-35 154.1 200 50.5
Solyc11g006900.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 1.1e-33 147.5 185 50.3
Dinv11834 Davidia involucrata HOM05D003139 ORTHO05D003540 4.5e-19 99.0 176 40.9
Peaxi162Scf00173g00210 Petunia axillaris HOM05D003139 ORTHO05D003540 7.7e-19 98.2 149 43.6
Dinv01029 Davidia involucrata HOM05D003139 ORTHO05D003540 3.8e-18 95.9 194 38.1
Dinv10925 Davidia involucrata HOM05D003139 ORTHO05D003540 3.8e-18 95.9 194 38.1
Hma1.2p1_0874F.1_g231330 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 1.6e-16 90.5 191 38.2
CSS0050344 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 2.1e-16 90.1 152 44.1
Oeu012633.1 Olea europaea HOM05D003139 ORTHO05D003540 2.1e-16 90.1 148 41.9
Oeu024810.1 Olea europaea HOM05D003139 ORTHO05D003540 8.0e-16 88.2 136 42.6
SalBow6G1960 Salvia bowleyana HOM05D003139 ORTHO05D003540 3.0e-15 86.3 147 39.5
Lsat_1_v5_gn_0_7921 Lactuca sativa HOM05D003139 ORTHO05D029286 7.5e-14 81.6 159 34.0
DCAR_028475 Daucus carota HOM05D003139 ORTHO05D003540 2.8e-13 79.7 140 38.6
ECA247G2190 Erigeron canadensis HOM05D003139 ORTHO05D003540 4.9e-13 79.0 144 40.3
Nitab4.5_0000692g0050 Nicotiana tabacum HOM05D003139 ORTHO05D003540 4.9e-13 79.0 124 42.7
Migut.L01785 Erythranthe guttata HOM05D003139 ORTHO05D003540 1.1e-12 77.8 192 35.9
CSS0031410 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 1.4e-12 77.4 117 45.3
Dinv21200 Davidia involucrata HOM05D003139 ORTHO05D003540 2.4e-12 76.6 151 37.7
HanXRQChr01g0010381 Helianthus annuus HOM05D003139 ORTHO05D003540 2.4e-12 76.6 177 36.7
Migut.F00874 Erythranthe guttata HOM05D003139 ORTHO05D003540 3.1e-12 76.3 126 41.3
Oeu047862.1 Olea europaea HOM05D003139 ORTHO05D003540 3.1e-12 76.3 196 34.2
Actinidia05423 Actinidia chinensis HOM05D003139 ORTHO05D003540 7.0e-12 75.1 124 40.3
Ca_08987_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 7.0e-12 75.1 189 36.5
MSTRG.10370 Avicennia marina HOM05D003139 ORTHO05D003540 9.2e-12 74.7 189 35.4
Lsat_1_v5_gn_5_164981 Lactuca sativa HOM05D003139 ORTHO05D003540 9.2e-12 74.7 133 39.1
Lsat_1_v5_gn_8_24181 Lactuca sativa HOM05D003139 ORTHO05D029286 9.2e-12 74.7 152 32.2
AUR62006190 Chenopodium quinoa HOM05D003139 ORTHO05D003540 3.5e-11 72.8 165 37.0
Hma1.2p1_0820F.1_g223870 Hydrangea macrophylla HOM05D003139 ORTHO05D003540 3.5e-11 72.8 124 40.3
Sc20g0006320 Simmondsia chinensis HOM05D003139 ORTHO05D003540 3.5e-11 72.8 216 32.9
EL10Ac7g16909 Beta vulgaris HOM05D003139 ORTHO05D003540 5.9e-11 72.0 201 31.3
PGR142G1499 Punica granatum HOM05D003139 ORTHO05D003540 7.8e-11 71.6 130 43.1
ECA248G2961 Erigeron canadensis HOM05D003139 ORTHO05D003540 1.0e-10 71.2 125 38.4
Oeu056878.1 Olea europaea HOM05D003139 ORTHO05D003540 1.0e-10 71.2 195 34.9
Peaxi162Scf00404g00061 Petunia axillaris HOM05D003139 ORTHO05D003540 1.0e-10 71.2 130 41.5
Solyc09g009840.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 1.0e-10 71.2 127 44.1
AUR62028515 Chenopodium quinoa HOM05D003139 ORTHO05D003540 1.3e-10 70.9 228 31.6
ClCG10G018920 Citrullus lanatus HOM05D003139 ORTHO05D003540 1.3e-10 70.9 157 38.2
ECA232G3979 Erigeron canadensis HOM05D003139 ORTHO05D029286 1.3e-10 70.9 162 30.2
Migut.J01028 Erythranthe guttata HOM05D003139 ORTHO05D003540 1.3e-10 70.9 125 40.8
Ah.15g090850 Amaranthus hybridus HOM05D003139 ORTHO05D003540 1.7e-10 70.5 202 32.2
Cfa016615 Carpinus fangiana HOM05D003139 ORTHO05D003540 1.7e-10 70.5 132 40.2
CsaV3_6G040710 Cucumis sativus L. HOM05D003139 ORTHO05D003540 1.7e-10 70.5 129 40.3
Oeu017682.1 Olea europaea HOM05D003139 ORTHO05D003540 2.3e-10 70.1 132 37.1
Sed0002377 Sechium edule HOM05D003139 ORTHO05D003540 2.3e-10 70.1 165 35.2
Sopen09g004600 Solanum pennellii HOM05D003139 ORTHO05D003540 2.3e-10 70.1 121 43.8
TWI53G0306 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 2.3e-10 70.1 139 40.3
CiPaw.10G010300 Carya illinoinensis HOM05D003139 ORTHO05D003540 2.9e-10 69.7 191 34.0
Solyc10g083330.1 Solanum lycopersicum HOM05D003139 ORTHO05D003540 3.8e-10 69.3 127 41.7
Sopen10g032810 Solanum pennellii HOM05D003139 ORTHO05D003540 3.8e-10 69.3 127 41.7
TWI74G1218 Tripterygium wilfordii HOM05D003139 ORTHO05D003540 3.8e-10 69.3 129 41.1
DCAR_020744 Daucus carota HOM05D003139 ORTHO05D003540 5.0e-10 68.9 136 36.0
FAN02G0223 Fragaria x ananassa HOM05D003139 ORTHO05D003540 5.0e-10 68.9 147 36.7
FAN05G0400 Fragaria x ananassa HOM05D003139 ORTHO05D003540 5.0e-10 68.9 147 36.7
FAN05G1773 Fragaria x ananassa HOM05D003139 ORTHO05D003540 5.0e-10 68.9 147 36.7
MELO3C024549.2 Cucumis melo HOM05D003139 ORTHO05D003540 6.6e-10 68.6 129 40.3
DCAR_009168 Daucus carota HOM05D003139 ORTHO05D003540 6.6e-10 68.6 123 39.0
Gohir.A09G139500 Gossypium hirsutum HOM05D003139 ORTHO05D003540 6.6e-10 68.6 139 38.8
Oeu047203.1 Olea europaea HOM05D003139 ORTHO05D003540 6.6e-10 68.6 194 32.0
SalBow5G1418 Salvia bowleyana HOM05D003139 ORTHO05D003540 6.6e-10 68.6 129 37.2
Gorai.006G155000 Gossypium raimondii HOM05D003139 ORTHO05D003540 8.6e-10 68.2 143 39.9
Nn6g34887 Nelumbo nucifera HOM05D003139 ORTHO05D003540 8.6e-10 68.2 134 39.6
FAN14G1758 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.1e-09 67.8 156 34.6
Gohir.D09G135100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 1.1e-09 67.8 143 39.9
MD14G1023600 Malus domestica HOM05D003139 ORTHO05D003540 1.1e-09 67.8 125 39.2
PGSC0003DMG400028163 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.1e-09 67.8 127 40.9
CiPaw.09G014800 Carya illinoinensis HOM05D003139 ORTHO05D003540 1.5e-09 67.4 138 39.1
FvH4_6g18850 Fragaria vesca HOM05D003139 ORTHO05D003540 1.5e-09 67.4 146 34.9
Glyma.03G196500 Glycine max HOM05D003139 ORTHO05D003540 1.5e-09 67.4 148 36.5
FAN09G1837 Fragaria x ananassa HOM05D003139 ORTHO05D003540 1.9e-09 67.0 147 37.4
HanXRQChr04g0109331 Helianthus annuus HOM05D003139 ORTHO05D003540 1.9e-09 67.0 198 33.3
Actinidia31269 Actinidia chinensis HOM05D003139 ORTHO05D003540 2.5e-09 66.6 150 36.0
Cc06_g05890 Coffea canephora HOM05D003139 ORTHO05D003540 2.5e-09 66.6 216 31.9
HanXRQChr04g0109341 Helianthus annuus HOM05D003139 ORTHO05D003540 3.3e-09 66.2 132 39.4
CsaV3_3G037330 Cucumis sativus L. HOM05D003139 ORTHO05D003540 4.3e-09 65.9 162 36.4
Duzib128G1370 Durio zibethinus HOM05D003139 ORTHO05D003540 4.3e-09 65.9 207 32.9
Atru.chr8.1495 Acer truncatum HOM05D003139 ORTHO05D003540 5.6e-09 65.5 135 40.0
ClCG04G010080 Citrullus lanatus HOM05D003139 ORTHO05D003540 7.3e-09 65.1 129 39.5
Gohir.A04G062300 Gossypium hirsutum HOM05D003139 ORTHO05D003540 7.3e-09 65.1 143 37.8
Oeu025672.1 Olea europaea HOM05D003139 ORTHO05D003540 7.3e-09 65.1 229 29.7
Phvul.007G152700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 7.3e-09 65.1 126 37.3
Rhsim04G0132000 Rhododendron simsii HOM05D003139 ORTHO05D003540 7.3e-09 65.1 125 41.6
TPR.G9897 Trifolium pratense HOM05D003139 ORTHO05D003540 7.3e-09 65.1 126 34.9
CANSAT64G2974 Cannabis sativa HOM05D003139 ORTHO05D003540 9.5e-09 64.7 160 36.2
Ca_00900_v3 Cicer arietinum L. HOM05D003139 ORTHO05D003540 9.5e-09 64.7 203 28.6
Haze_19619 Corylus avellana HOM05D003139 ORTHO05D003540 9.5e-09 64.7 132 39.4
DCAR_013395 Daucus carota HOM05D003139 ORTHO05D003540 9.5e-09 64.7 147 35.4
Duzib106G1991 Durio zibethinus HOM05D003139 ORTHO05D003540 9.5e-09 64.7 127 40.9
VMungo0720G0359 Vigna mungo HOM05D003139 ORTHO05D003540 9.5e-09 64.7 127 37.0
ECA233G4679 Erigeron canadensis HOM05D003139 ORTHO05D029286 1.2e-08 64.3 157 33.1
Glyma.10G073600 Glycine max HOM05D003139 ORTHO05D003540 1.6e-08 63.9 128 38.3
MD12G1024700 Malus domestica HOM05D003139 ORTHO05D003540 1.6e-08 63.9 132 35.6
Sed0022451 Sechium edule HOM05D003139 ORTHO05D003540 1.6e-08 63.9 137 38.0
PGSC0003DMG400008878 Solanum tuberosum HOM05D003139 ORTHO05D003540 1.6e-08 63.9 143 39.9
Glyma.13G154300 Glycine max HOM05D003139 ORTHO05D003540 2.1e-08 63.5 127 40.9
Glyma.19G194957 Glycine max HOM05D003139 ORTHO05D003540 2.1e-08 63.5 188 33.0
Lalb_Chr25g0288311 Lupinus albus HOM05D003139 ORTHO05D003540 2.1e-08 63.5 176 36.4
Duzib093G1338 Durio zibethinus HOM05D003139 ORTHO05D003540 2.8e-08 63.2 131 40.5
Lsat_1_v5_gn_9_20601 Lactuca sativa HOM05D003139 ORTHO05D003540 2.8e-08 63.2 126 35.7
Medtr1g059890 Medicago truncatula HOM05D003139 ORTHO05D003540 2.8e-08 63.2 140 38.6
Psat6g080520 Pisum sativum HOM05D003139 ORTHO05D003540 2.8e-08 63.2 130 35.4
Prupe.7G109200 Prunus persica HOM05D003139 ORTHO05D003540 2.8e-08 63.2 174 33.9
Nn2g14171 Nelumbo nucifera HOM05D003139 ORTHO05D003540 3.6e-08 62.8 199 30.2
TAR633G0951 Trochodendron aralioides HOM05D003139 ORTHO05D003540 3.6e-08 62.8 215 29.3
Phvul.001G190700 Phaseolus vulgaris HOM05D003139 ORTHO05D003540 4.7e-08 62.4 132 37.9
CSS0009772 Camellia sinensis var. sinensis HOM05D003139 ORTHO05D003540 6.1e-08 62.0 185 34.1
Aqoxy4G02769 Aquilegia oxysepala HOM05D003139 ORTHO05D003540 8.0e-08 61.6 161 33.5
Nitab4.5_0014515g0010 Nicotiana tabacum HOM05D003139 ORTHO05D003540 8.0e-08 61.6 226 32.7
Nitab4.5_0001933g0030 Nicotiana tabacum HOM05D003139 ORTHO05D003540 1.0e-07 61.2 245 33.1
Psat3g032560 Pisum sativum HOM05D003139 ORTHO05D003540 1.4e-07 60.8 185 34.1
SGA_v2.0_scaffold35G14064 Striga asiatica HOM05D003139 ORTHO05D003540 1.4e-07 60.8 123 33.3
BcaC02g09232 Brassica carinata HOM05D003139 ORTHO05D003540 1.8e-07 60.5 188 31.9
HanXRQChr08g0229891 Helianthus annuus HOM05D003139 ORTHO05D003540 2.3e-07 60.1 180 32.2
Manes.08G025900 Manihot esculenta HOM05D003139 ORTHO05D003540 2.3e-07 60.1 156 37.8
Medtr7g104725 Medicago truncatula HOM05D003139 ORTHO05D003540 2.3e-07 60.1 169 34.3
Potri.006G212800 Populus trichocarpa HOM05D003139 ORTHO05D003540 2.3e-07 60.1 132 38.6
Sp5g09630 Schrenkiella parvula HOM05D003139 ORTHO05D003540 2.3e-07 60.1 205 31.2
unitig_8.g4968 Utricularia gibba HOM05D003139 ORTHO05D003540 2.3e-07 60.1 135 37.8
SGA_v2.0_scaffold184G39967 Striga asiatica HOM05D003139 ORTHO05D003540 3.0e-07 59.7 124 33.9
Carub.0005s1916 Capsella rubella HOM05D003139 ORTHO05D003540 4.0e-07 59.3 209 30.6
Lsat_1_v5_gn_8_77361 Lactuca sativa HOM05D003139 ORTHO05D003540 4.0e-07 59.3 162 31.5
AL5G33470 Arabidopsis lyrata HOM05D003139 ORTHO05D003540 5.2e-07 58.9 223 29.6
COL.COLO4_29723 Corchorus olitorius HOM05D003139 ORTHO05D003540 5.2e-07 58.9 191 32.5
MELO3C009477.2 Cucumis melo HOM05D003139 ORTHO05D003540 5.2e-07 58.9 200 32.5
Gohir.D01G195400 Gossypium hirsutum HOM05D003139 ORTHO05D003540 5.2e-07 58.9 190 33.2
Gorai.002G239600 Gossypium raimondii HOM05D003139 ORTHO05D003540 5.2e-07 58.9 190 33.2
Sabra06G0163800 Salix brachista HOM05D003139 ORTHO05D003540 5.2e-07 58.9 133 37.6
Sabra16G0085400 Salix brachista HOM05D003139 ORTHO05D003540 5.2e-07 58.9 133 37.6
Sabra16G0087500 Salix brachista HOM05D003139 ORTHO05D003540 5.2e-07 58.9 133 37.6
Thecc.05G090100 Theobroma cacao HOM05D003139 ORTHO05D003540 5.2e-07 58.9 132 38.6
Lj5g0002620 Lotus japonicus HOM05D003139 ORTHO05D003540 6.8e-07 58.5 132 35.6
Manes.09G054800 Manihot esculenta HOM05D003139 ORTHO05D003540 6.8e-07 58.5 128 39.8
TAR369G0615 Trochodendron aralioides HOM05D003139 ORTHO05D003540 6.8e-07 58.5 252 25.8
Aa31LG10G7720 Aethionema arabicum HOM05D003139 ORTHO05D003540 8.9e-07 58.2 193 30.1
BraA09t40041Z Brassica rapa HOM05D003139 ORTHO05D003540 8.9e-07 58.2 187 30.5
Ciclev10012256m.g Citrus clementina HOM05D003139 ORTHO05D003540 8.9e-07 58.2 205 28.3
Gohir.A01G206000 Gossypium hirsutum HOM05D003139 ORTHO05D003540 8.9e-07 58.2 129 39.5
PGR004G2661 Punica granatum HOM05D003139 ORTHO05D003540 8.9e-07 58.2 184 32.1
QL07p038927 Quercus lobata HOM05D003139 ORTHO05D003540 8.9e-07 58.2 140 35.7
BcaC07g39636 Brassica carinata HOM05D003139 ORTHO05D003540 1.2e-06 57.8 187 31.0
C04p40300 Brassica napus HOM05D003139 ORTHO05D003540 1.2e-06 57.8 187 31.6
Eucgr.A02660 Eucalyptus grandis HOM05D003139 ORTHO05D003540 1.2e-06 57.8 173 35.3
BcaB01g00349 Brassica carinata HOM05D003139 ORTHO05D003540 1.5e-06 57.4 174 30.5
A09p45800 Brassica napus HOM05D003139 ORTHO05D003540 2.0e-06 57.0 187 30.5
Gohir.D04G099100 Gossypium hirsutum HOM05D003139 ORTHO05D003540 2.0e-06 57.0 143 36.4
Gorai.009G401500 Gossypium raimondii HOM05D003139 ORTHO05D003540 2.0e-06 57.0 143 36.4
AT3G52710 Arabidopsis thaliana HOM05D003139 ORTHO05D003540 2.6e-06 56.6 224 30.8
Thhalv10017798m.g Eutrema salsugineum HOM05D003139 ORTHO05D003540 2.6e-06 56.6 180 31.1
Lalb_Chr20g0111681 Lupinus albus HOM05D003139 ORTHO05D003540 2.6e-06 56.6 138 34.1
Potri.016G079500 Populus trichocarpa HOM05D003139 ORTHO05D003540 2.6e-06 56.6 133 37.6
TPR.G23344 Trifolium pratense HOM05D003139 ORTHO05D003540 4.4e-06 55.8 192 31.8
C08p27990 Brassica napus HOM05D003139 ORTHO05D003540 5.7e-06 55.5 176 30.1
BolC8t50411H Brassica oleracea HOM05D003139 ORTHO05D003540 5.7e-06 55.5 176 30.1
Lalb_Chr02g0154921 Lupinus albus HOM05D003139 ORTHO05D003540 9.8e-06 54.7 128 33.6
THA.LOC104827508 Tarenaya hassleriana HOM05D003139 ORTHO05D003540 9.8e-06 54.7 201 27.9
VMungo1383G1679 Vigna mungo HOM05D003139 ORTHO05D003540 9.8e-06 54.7 134 33.6


User provided reference genes

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