Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005742g0010 Nicotiana tabacum HOM05D000452 ORTHO05D005748 6.0e-294 1013.4 515 100.0
Nitab4.5_0000602g0100 Nicotiana tabacum HOM05D000452 ORTHO05D005748 1.7e-280 968.8 513 95.3
PGSC0003DMG400008083 Solanum tuberosum HOM05D000452 ORTHO05D005748 2.2e-256 888.6 502 89.4
Peaxi162Scf00270g00311 Petunia axillaris HOM05D000452 ORTHO05D005748 5.5e-255 884.0 514 88.3
Solyc11g069520.2 Solanum lycopersicum HOM05D000452 ORTHO05D005748 2.5e-252 875.2 504 88.9
Sopen11g028230 Solanum pennellii HOM05D000452 ORTHO05D005748 1.4e-250 869.4 502 88.6
Cc01_g11000 Coffea canephora HOM05D000452 ORTHO05D005748 7.5e-188 661.0 504 65.7
CSS0006947 Camellia sinensis var. sinensis HOM05D000452 ORTHO05D005748 8.3e-187 657.5 494 68.0
Peaxi162Scf00034g00107 Petunia axillaris HOM05D000452 ORTHO05D005748 2.7e-185 652.5 510 70.4
CiPaw.13G114400 Carya illinoinensis HOM05D000452 ORTHO05D005748 3.0e-184 649.0 492 67.1
GSVIVG01025200001 Vitis vinifera HOM05D000452 ORTHO05D005748 1.1e-183 647.1 508 66.7
Actinidia03722 Actinidia chinensis HOM05D000452 ORTHO05D005748 2.1e-182 642.9 474 68.1
TAR636G2205 Trochodendron aralioides HOM05D000452 ORTHO05D005748 7.0e-178 627.9 492 65.4
Hma1.2p1_0307F.1_g119780 Hydrangea macrophylla HOM05D000452 ORTHO05D005748 1.2e-177 627.1 505 66.3
Haze_23811 Corylus avellana HOM05D000452 ORTHO05D005748 1.0e-176 624.0 503 63.0
Oeu030194.1 Olea europaea HOM05D000452 ORTHO05D005748 6.6e-176 621.3 508 63.0
MD03G1119900 Malus domestica HOM05D000452 ORTHO05D005748 2.1e-174 616.3 495 64.0
Manes.04G019700 Manihot esculenta HOM05D000452 ORTHO05D005748 4.0e-173 612.1 495 63.2
Oeu014003.1 Olea europaea HOM05D000452 ORTHO05D005748 1.5e-172 610.1 474 63.5
Migut.D02233 Erythranthe guttata HOM05D000452 ORTHO05D005748 2.0e-172 609.8 499 64.3
FvH4_3g31960 Fragaria vesca HOM05D000452 ORTHO05D005748 9.9e-172 607.4 497 63.2
CANSAT54G2994 Cannabis sativa HOM05D000452 ORTHO05D005748 1.7e-171 606.7 493 63.1
FAN25G3410 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.2e-171 606.3 496 62.9
FAN11G0834 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.9e-171 605.9 497 63.0
FAN21G3667 Fragaria x ananassa HOM05D000452 ORTHO05D005748 2.9e-171 605.9 497 63.0
RcHm_v2.0_Chr5g0058721 Rosa chinensis HOM05D000452 ORTHO05D005748 6.4e-171 604.7 500 62.6
TWI79G0017 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 6.4e-171 604.7 493 64.1
MD11G1137500 Malus domestica HOM05D000452 ORTHO05D005748 1.9e-170 603.2 495 62.8
PSO339G2396 Papaver somniferum HOM05D000452 ORTHO05D005748 2.4e-170 602.8 495 62.6
Cfa011305 Carpinus fangiana HOM05D000452 ORTHO05D005748 3.2e-170 602.4 444 68.0
TWI31G0927 Tripterygium wilfordii HOM05D000452 ORTHO05D005748 3.2e-170 602.4 496 63.3
Gorai.003G142700 Gossypium raimondii HOM05D000452 ORTHO05D005748 5.4e-170 601.7 489 64.6
MSTRG.21118 Avicennia marina HOM05D000452 ORTHO05D005748 1.2e-169 600.5 501 61.3
vmacro03204 Vaccinium macrocarpon HOM05D000452 ORTHO05D005748 1.2e-169 600.5 493 63.9
Gohir.A03G032800 Gossypium hirsutum HOM05D000452 ORTHO05D005748 3.5e-169 599.0 489 64.4
Prupe.6G103100 Prunus persica HOM05D000452 ORTHO05D005748 7.8e-169 597.8 504 62.9
Lalb_Chr01g0004351 Lupinus albus HOM05D000452 ORTHO05D005748 3.9e-168 595.5 494 61.5
Rhsim13G0095000 Rhododendron simsii HOM05D000452 ORTHO05D005748 1.1e-167 594.0 493 63.9
Thecc.09G342400 Theobroma cacao HOM05D000452 ORTHO05D005748 1.5e-167 593.6 494 63.2
Potri.009G011400 Populus trichocarpa HOM05D000452 ORTHO05D005748 2.5e-167 592.8 493 62.5
VMungo1127G0723 Vigna mungo HOM05D000452 ORTHO05D005748 2.5e-167 592.8 492 61.4
COL.COLO4_18319 Corchorus olitorius HOM05D000452 ORTHO05D002419 3.3e-167 592.4 492 63.2
Gohir.D03G135600 Gossypium hirsutum HOM05D000452 ORTHO05D005748 3.3e-167 592.4 490 63.9
Lj3g0027876 Lotus japonicus HOM05D000452 ORTHO05D005748 3.3e-167 592.4 486 62.6
Glyma.11G145300 Glycine max HOM05D000452 ORTHO05D005748 5.6e-167 591.7 493 61.3
Phvul.011G080300 Phaseolus vulgaris HOM05D000452 ORTHO05D005748 7.3e-167 591.3 493 61.7
arahy.Tifrunner.gnm1.ann1.I1PATR Arachis hypogaea HOM05D000452 ORTHO05D005748 8.9e-165 584.3 498 59.4
Dinv02128 Davidia involucrata HOM05D000452 ORTHO05D005748 1.2e-164 583.9 504 61.9
TAR633G0246 Trochodendron aralioides HOM05D000452 ORTHO05D005748 1.5e-164 583.6 487 61.2
arahy.Tifrunner.gnm1.ann1.S7ZFT4 Arachis hypogaea HOM05D000452 ORTHO05D005748 3.4e-164 582.4 499 59.1
Medtr4g058890 Medicago truncatula HOM05D000452 ORTHO05D005748 3.4e-164 582.4 493 61.1
QL01p021907 Quercus lobata HOM05D000452 ORTHO05D005748 7.6e-164 581.3 590 52.7
Eucgr.B02508 Eucalyptus grandis HOM05D000452 ORTHO05D005748 2.4e-162 576.2 493 61.9
arahy.Tifrunner.gnm1.ann1.AXM315 Arachis hypogaea HOM05D000452 ORTHO05D005748 3.2e-162 575.9 499 58.9
Oeu037301.1 Olea europaea HOM05D000452 ORTHO05D005748 7.1e-162 574.7 508 59.3
Lalb_Chr19g0137171 Lupinus albus HOM05D000452 ORTHO05D005748 1.2e-161 573.9 495 60.4
SGA_v2.0_scaffold180G39657 Striga asiatica HOM05D000452 ORTHO05D005748 1.3e-160 570.5 493 60.4
Sc06g0010310 Simmondsia chinensis HOM05D000452 ORTHO05D005748 1.2e-158 563.9 444 63.3
MELO3C004897.2 Cucumis melo HOM05D000452 ORTHO05D005748 1.6e-158 563.5 496 58.5
DCAR_022745 Daucus carota HOM05D000452 ORTHO05D005748 1.6e-158 563.5 429 66.2
Ciclev10028288m.g Citrus clementina HOM05D000452 ORTHO05D005748 2.8e-158 562.8 494 58.5
Nn2g10818 Nelumbo nucifera HOM05D000452 ORTHO05D005748 4.7e-158 562.0 496 59.7
AUR62042196 Chenopodium quinoa HOM05D000452 ORTHO05D005748 1.1e-157 560.8 443 64.6
HanXRQChr01g0019321 Helianthus annuus HOM05D000452 ORTHO05D005748 1.8e-157 560.1 490 60.6
arahy.Tifrunner.gnm1.ann1.WEDN33 Arachis hypogaea HOM05D000452 ORTHO05D005748 9.0e-157 557.8 502 59.2
EL10Ac9g22533 Beta vulgaris HOM05D000452 ORTHO05D005748 1.2e-156 557.4 467 60.8
Sed0009159 Sechium edule HOM05D000452 ORTHO05D005748 2.6e-156 556.2 496 58.7
AUR62024960 Chenopodium quinoa HOM05D000452 ORTHO05D005748 5.8e-156 555.1 443 64.3
ECA248G3240 Erigeron canadensis HOM05D000452 ORTHO05D005748 7.6e-156 554.7 492 60.6
Lj2C1024T12 Lonicera japonica HOM05D000452 ORTHO05D005748 1.3e-155 553.9 440 65.2
HanXRQChr07g0195801 Helianthus annuus HOM05D000452 ORTHO05D005748 1.4e-154 550.4 495 58.6
CsaV3_1G013960 Cucumis sativus L. HOM05D000452 ORTHO05D005748 3.2e-154 549.3 480 58.8
ClCG01G013590 Citrullus lanatus HOM05D000452 ORTHO05D005748 1.6e-153 547.0 490 57.6
BcaC05g24718 Brassica carinata HOM05D000452 ORTHO05D005748 7.8e-153 544.7 501 57.7
BolC5t29365H Brassica oleracea HOM05D000452 ORTHO05D005748 7.8e-153 544.7 501 57.7
THA.LOC104800598 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 8.7e-152 541.2 494 57.1
Aqoxy1G01223 Aquilegia oxysepala HOM05D000452 ORTHO05D005748 1.1e-151 540.8 522 55.0
AT1G08030 Arabidopsis thaliana HOM05D000452 ORTHO05D005748 9.6e-151 537.7 502 58.2
Thhalv10007441m.g Eutrema salsugineum HOM05D000452 ORTHO05D005748 9.6e-151 537.7 500 57.2
Psat7g192440 Pisum sativum HOM05D000452 ORTHO05D005748 1.6e-150 537.0 494 57.9
THA.LOC104826371 Tarenaya hassleriana HOM05D000452 ORTHO05D005748 2.8e-150 536.2 495 57.0
Sp1g06650 Schrenkiella parvula HOM05D000452 ORTHO05D005748 1.4e-149 533.9 488 56.8
AL1G18360 Arabidopsis lyrata HOM05D000452 ORTHO05D005748 1.8e-149 533.5 501 57.9
BraA06t23716Z Brassica rapa HOM05D000452 ORTHO05D005748 1.8e-149 533.5 498 57.2
PGR102G2372 Punica granatum HOM05D000452 ORTHO05D005748 9.0e-149 531.2 500 58.2
A06p05090 Brassica napus HOM05D000452 ORTHO05D005748 9.9e-148 527.7 444 61.0
CARHR007800 Cardamine hirsuta HOM05D000452 ORTHO05D005748 1.3e-147 527.3 443 60.3
BcaB02g06693 Brassica carinata HOM05D000452 ORTHO05D005748 3.8e-147 525.8 506 55.5
C05p06050 Brassica napus HOM05D000452 ORTHO05D005748 1.4e-146 523.9 447 60.2
CsaV3_1G013970 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.9e-146 523.5 500 55.4
PSO384G2013 Papaver somniferum HOM05D000452 ORTHO05D005748 5.4e-146 521.9 444 60.8
CsaV3_1G013990 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.6e-145 520.4 500 55.0
Carub.0001s0737 Capsella rubella HOM05D000452 ORTHO05D005748 2.1e-145 520.0 481 56.5
Cpa.g.sc279.1 Carica papaya HOM05D000452 ORTHO05D005748 4.6e-145 518.8 433 60.5
A08p35370 Brassica napus HOM05D000452 ORTHO05D005748 7.9e-145 518.1 498 55.8
BraA08t35443Z Brassica rapa HOM05D000452 ORTHO05D005748 3.0e-144 516.2 500 55.6
PSO339G5930 Papaver somniferum HOM05D000452 ORTHO05D005748 6.7e-144 515.0 444 60.1
unitig_736.g22410 Utricularia gibba HOM05D000452 ORTHO05D005748 1.9e-143 513.5 534 52.8
Lsat_1_v5_gn_1_64080 Lactuca sativa HOM05D000452 ORTHO05D005748 5.6e-143 511.9 437 62.0
ECA238G2818 Erigeron canadensis HOM05D000452 ORTHO05D005748 2.8e-142 509.6 498 53.4
BolC8t47149H Brassica oleracea HOM05D000452 ORTHO05D005748 4.8e-142 508.8 503 54.3
CDE02G3238 Ceratophyllum demersum HOM05D000452 ORTHO05D005748 1.1e-141 507.7 498 53.8
C08p03470 Brassica napus HOM05D000452 ORTHO05D005748 2.4e-141 506.5 508 53.5
Lj1C203G7 Lonicera japonica HOM05D000452 ORTHO05D005748 3.8e-139 499.2 442 60.9
Aa31sc122G10 Aethionema arabicum HOM05D000452 ORTHO05D005748 7.1e-138 495.0 464 56.7
CiPaw.14G081900 Carya illinoinensis HOM05D000452 ORTHO05D005748 7.1e-138 495.0 446 58.1
BcaB03g13356 Brassica carinata HOM05D000452 ORTHO05D005748 1.2e-137 494.2 500 53.2
Zm00001eb271200 Zea mays HOM05D000452 ORTHO05D005748 6.0e-137 491.9 510 51.4
Ca_19270_v3 Cicer arietinum L. HOM05D000452 ORTHO05D005748 7.4e-135 485.0 496 54.8
Zm00001eb376480 Zea mays HOM05D000452 ORTHO05D005748 1.6e-134 483.8 460 54.8
SEGI_04235 Sequoiadendron giganteum HOM05D000452 ORTHO05D005748 1.3e-131 474.2 505 50.9
ATR0048G028 Amborella trichopoda HOM05D000452 ORTHO05D005748 9.3e-130 468.0 429 57.8
PSO063G2649 Papaver somniferum HOM05D000452 ORTHO05D005748 6.7e-128 461.8 396 61.1
Lsat_1_v5_gn_2_100281 Lactuca sativa HOM05D000452 ORTHO05D005748 3.3e-127 459.5 414 57.5
Oeu001281.1 Olea europaea HOM05D000452 ORTHO05D005748 6.3e-126 455.3 386 62.7
TPR.G6153 Trifolium pratense HOM05D000452 ORTHO05D005748 6.3e-126 455.3 493 51.9
MBI07_g26020_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 2.0e-116 423.7 415 56.9
HPP92_008616 Vanilla planifolia HOM05D000452 ORTHO05D005748 5.0e-115 419.1 328 61.9
Atru.chr3.3611 Acer truncatum HOM05D000452 ORTHO05D005748 8.5e-115 418.3 430 54.7
SalBow3G4114 Salvia bowleyana HOM05D000452 ORTHO05D005748 9.4e-114 414.8 335 62.7
CsaV3_1G013980 Cucumis sativus L. HOM05D000452 ORTHO05D005748 1.4e-112 411.0 486 48.6
Lsat_1_v5_gn_9_37660 Lactuca sativa HOM05D000452 ORTHO05D005748 3.6e-105 386.3 308 63.0
RhsimUnG0046400 Rhododendron simsii HOM05D000452 ORTHO05D005748 3.0e-104 383.3 450 51.3
Mapoly0061s0093 Marchantia polymorpha HOM05D000452 ORTHO05D005748 6.1e-97 359.0 455 44.4
Hund08167 Selenicereus undatus HOM05D000452 ORTHO05D005748 4.0e-96 356.3 363 56.7
AagrBONN_evm.TU.Sc2ySwM_117.3844 Anthoceros agrestis HOM05D000452 ORTHO05D005748 8.3e-94 348.6 486 42.2
Lsat_1_v5_gn_2_91861 Lactuca sativa HOM05D000452 ORTHO05D005748 1.1e-93 348.2 304 59.2
Pp3c16_24250 Physcomitrium patens HOM05D000452 ORTHO05D005748 1.1e-85 321.6 457 42.0
Dinv01781 Davidia involucrata HOM05D000452 ORTHO05D005748 5.0e-83 312.8 210 71.9
SHI19559 Sapria himalayana HOM05D000452 ORTHO05D005748 2.8e-78 297.0 316 50.3
DCAR_018802 Daucus carota HOM05D000452 ORTHO05D005748 4.9e-78 296.2 293 54.6
SMO134G0053 Selaginella moellendorffii HOM05D000452 ORTHO05D005748 1.5e-74 284.6 306 49.3
MBI10_g19822_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 7.3e-74 282.3 309 53.1
Dinv32733 Davidia involucrata HOM05D000452 ORTHO05D005748 8.3e-70 268.9 238 63.0
CBR_g51944 Chara braunii HOM05D000452 ORTHO05D005748 7.0e-69 265.8 505 33.7
Os06g0158200 Oryza sativa ssp. japonica HOM05D000452 ORTHO05D005748 2.3e-67 260.8 194 67.5
Lsat_1_v5_gn_5_88800 Lactuca sativa HOM05D000452 ORTHO05D005748 7.3e-50 202.6 186 58.6
TPR.G26833 Trifolium pratense HOM05D000452 ORTHO05D005748 1.6e-49 201.4 125 75.2
PRCOL_00001963 Prasinoderma coloniale HOM05D000452 ORTHO05D005748 1.8e-40 171.4 483 29.0
Cre01.g022600 Chlamydomonas reinhardtii HOM05D000452 ORTHO05D005748 6.9e-40 169.5 301 35.9
Lsat_1_v5_gn_3_50740 Lactuca sativa HOM05D000452 ORTHO05D005748 4.6e-36 156.8 146 60.3
SHI19558 Sapria himalayana HOM05D000452 ORTHO05D000031 3.5e-28 130.6 200 38.0
Hund08166 Selenicereus undatus HOM05D000452 ORTHO05D005748 1.5e-26 125.2 89 62.9
C04p54260 Brassica napus HOM05D000452 ORTHO05D005748 6.2e-25 119.8 84 66.7
MD11G1150200 Malus domestica HOM05D000452 ORTHO05D005748 1.1e-24 119.0 80 63.8
MBI15_g38533_MAGBIO Magnolia biondii HOM05D000452 ORTHO05D005748 7.6e-23 112.8 125 53.6
HPP92_008615 Vanilla planifolia HOM05D000452 ORTHO05D005748 1.6e-17 95.1 175 38.3
BcaC02g08433 Brassica carinata HOM05D000452 ORTHO05D005748 6.9e-16 89.7 66 63.6
BolC4t23229H Brassica oleracea HOM05D000452 ORTHO05D005748 9.0e-16 89.4 65 64.6
BolC2t09709H Brassica oleracea HOM05D000452 ORTHO05D005748 4.5e-15 87.0 65 63.1
Lsat_1_v5_gn_4_22460 Lactuca sativa HOM05D000344 ORTHO05D005714 4.6e-12 77.0 57 66.7
C07p54990 Brassica napus HOM05D000452 ORTHO05D005748 4.3e-10 70.5 46 67.4
BcaC02g07555 Brassica carinata HOM05D000452 ORTHO05D005748 4.5e-07 60.5 81 43.2
PRCOL_00002815 Prasinoderma coloniale HOM05D000452 ORTHO05D333388 4.5e-07 60.5 381 22.0
Zm00001eb318140 Zea mays HOM05D000433 ORTHO05D000443 2.9e-06 57.8 190 31.1
Zm00001eb140800 Zea mays HOM05D000433 ORTHO05D000443 8.5e-06 56.2 101 36.6
Zm00001eb331980 Zea mays HOM05D000433 ORTHO05D000443 8.5e-06 56.2 190 31.1


User provided reference genes

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