Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 4.7e-177 624.4 308 100.0
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 5.6e-130 468.0 333 72.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 8.1e-129 464.2 333 70.9
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.9e-128 460.7 330 72.1
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 2.6e-127 459.1 333 71.5
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 9.9e-127 457.2 333 71.2
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.7e-126 456.4 330 71.8
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 8.1e-121 437.6 333 68.2
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.1e-120 437.2 330 66.7
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 6.8e-120 434.5 327 67.9
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.9e-118 429.1 313 69.6
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 1.9e-117 426.4 317 67.5
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.1e-117 424.5 331 65.9
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 9.2e-117 424.1 338 65.7
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 9.2e-117 424.1 323 65.6
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 1.3e-115 420.2 325 66.8
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 3.9e-115 418.7 317 66.6
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 8.7e-115 417.5 337 63.2
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.1e-114 417.2 331 65.9
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 1.9e-114 416.4 320 65.6
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.3e-114 415.2 338 62.4
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.3e-114 415.2 338 62.4
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 7.3e-114 414.5 338 62.1
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 9.6e-114 414.1 331 65.6
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 9.6e-114 414.1 331 63.7
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.7e-113 411.8 331 64.7
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 6.2e-113 411.4 334 62.6
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 6.2e-113 411.4 321 64.8
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 1.1e-112 410.6 331 62.8
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.4e-112 410.2 336 61.6
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.8e-112 409.8 321 64.2
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 4.0e-112 408.7 326 63.8
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 4.0e-112 408.7 331 64.7
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 5.2e-112 408.3 325 64.9
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 2.0e-111 406.4 320 64.7
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 1.7e-110 403.3 338 61.8
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 2.9e-110 402.5 324 64.5
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 4.9e-110 401.7 331 61.6
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 8.4e-110 401.0 311 67.2
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 2.4e-109 399.4 331 60.4
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 6.0e-108 394.8 326 60.4
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 7.8e-108 394.4 313 63.9
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 7.8e-108 394.4 320 63.1
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 2.3e-107 392.9 319 61.8
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 1.9e-106 389.8 313 62.3
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 4.3e-106 388.7 329 58.4
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 4.3e-106 388.7 316 63.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 5.6e-106 388.3 323 62.5
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 9.6e-106 387.5 316 62.0
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 1.3e-105 387.1 331 58.3
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.8e-105 386.0 339 60.5
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 3.6e-105 385.6 326 59.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 3.6e-105 385.6 331 59.2
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 3.6e-105 385.6 302 63.2
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 8.1e-105 384.4 320 59.4
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 8.1e-105 384.4 320 59.4
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 8.1e-105 384.4 320 59.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 8.1e-105 384.4 318 60.4
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 1.1e-104 384.0 328 59.5
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 1.4e-104 383.6 320 59.1
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.4e-104 383.6 322 59.3
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 1.8e-104 383.3 311 62.4
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 2.4e-104 382.9 320 59.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 2.4e-104 382.9 320 59.1
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 4.0e-104 382.1 316 60.8
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 6.9e-104 381.3 332 57.8
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 6.9e-104 381.3 331 58.9
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 2.0e-103 379.8 323 60.1
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.4e-103 379.0 326 58.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 4.5e-103 378.6 320 58.8
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 9.9e-103 377.5 331 58.0
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 1.3e-102 377.1 323 60.1
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 1.7e-102 376.7 326 58.6
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 2.9e-102 375.9 318 59.7
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 4.9e-102 375.2 329 58.7
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 8.4e-102 374.4 317 60.9
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 1.9e-101 373.2 324 56.8
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.9e-101 373.2 320 58.1
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 4.2e-101 372.1 321 57.9
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 9.3e-101 370.9 324 56.8
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 2.3e-99 366.3 327 56.9
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.3e-97 360.5 322 56.8
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 2.1e-97 359.8 320 56.9
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 4.0e-96 355.5 319 57.1
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 2.0e-95 353.2 318 57.2
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 1.1e-93 347.4 323 55.1
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 1.1e-93 347.4 331 55.6
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 9.3e-93 344.4 328 53.7
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.2e-92 344.0 323 57.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 8.2e-89 331.3 180 90.6
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 7.4e-82 308.1 306 54.6
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.2e-78 296.6 309 51.8
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 3.6e-76 289.3 308 52.3
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 4.8e-73 278.9 282 52.1
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 2.7e-68 263.1 188 70.2
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.9e-68 261.5 306 46.7
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 2.3e-67 260.0 306 47.1
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 3.0e-67 259.6 317 46.1
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 5.1e-67 258.8 164 79.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 3.8e-62 242.7 177 65.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.0e-56 221.9 254 46.5
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.7e-54 217.2 162 65.4
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 6.5e-54 215.3 133 78.2
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.3e-49 201.1 158 66.5
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.3e-49 201.1 203 51.2
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 1.1e-48 198.0 198 53.0
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 7.5e-42 175.3 279 40.9
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 6.3e-41 172.2 243 43.6
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 5.9e-39 165.6 128 64.8
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 5.9e-39 165.6 116 66.4
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 3.0e-35 153.3 93 78.5
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 7.8e-31 138.7 125 53.6
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-27 126.7 72 84.7
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 2.0e-26 124.0 112 57.1
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.0e-22 111.7 84 59.5
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 2.2e-17 94.0 222 30.6
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.2e-08 63.5 206 29.6
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 8.6e-06 55.5 135 27.4


User provided reference genes

Program Settings